RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ZFP2Q6ZN57 461 aa14.85□□□□□ -0.03
HPS3-206ENST00000486530 ERASQ7Z444 233 aa14.85□□□□□ -0.03
HPS3-206ENST00000486530 NDUFA11Q86Y39 141 aa14.85□□□□□ -0.03
HPS3-206ENST00000486530 MRPL35Q9NZE8 188 aaKnown RBP14.85□□□□□ -0.03
HPS3-206ENST00000486530 H7C1H1 209 aa14.84□□□□□ -0.03
HPS3-206ENST00000486530 PLNP26678 52 aa14.84□□□□□ -0.03
HPS3-206ENST00000486530 BOD1L2Q8IYS8 172 aa14.84□□□□□ -0.03
HPS3-206ENST00000486530 C11orf72Q8NBR9 251 aa14.84□□□□□ -0.03
HPS3-206ENST00000486530 FAM110AQ9BQ89 295 aa14.84□□□□□ -0.03
HPS3-206ENST00000486530 SPXQ9BT56 116 aa14.84□□□□□ -0.03
HPS3-206ENST00000486530 DLEU1O43261 78 aa14.84□□□□□ -0.03
HPS3-206ENST00000486530 XCL2Q9UBD3 114 aa14.84□□□□□ -0.03
HPS3-206ENST00000486530 F8P00451 2351 aa14.83□□□□□ -0.04
HPS3-206ENST00000486530 SETD2Q9BYW2 2564 aaPredicted RBP14.83□□□□□ -0.04
HPS3-206ENST00000486530 RIPPLY3P57055 190 aa14.83□□□□□ -0.04
HPS3-206ENST00000486530 NEXN-AS1Q8NBZ9 246 aa14.83□□□□□ -0.04
HPS3-206ENST00000486530 F8VRH5 84 aa14.82□□□□□ -0.04
HPS3-206ENST00000486530 PRM2P04554 102 aa14.82□□□□□ -0.04
HPS3-206ENST00000486530 NMUP48645 174 aa14.82□□□□□ -0.04
HPS3-206ENST00000486530 C2orf91Q6ZV80 131 aa14.82□□□□□ -0.04
HPS3-206ENST00000486530 TMEM208Q9BTX3 173 aa14.82□□□□□ -0.04
HPS3-206ENST00000486530 MPV17L2Q567V2 206 aa14.82□□□□□ -0.04
HPS3-206ENST00000486530 C12orf54Q6X4T0 127 aa14.82□□□□□ -0.04
HPS3-206ENST00000486530 BAALCQ8WXS3 180 aa14.82□□□□□ -0.04
HPS3-206ENST00000486530 TP53TG1Q9Y2A0 90 aa14.82□□□□□ -0.04
HPS3-206ENST00000486530 TCTAP57738 103 aa14.81□□□□□ -0.04
HPS3-206ENST00000486530 ZC2HC1BQ5TFG8 222 aa14.81□□□□□ -0.04
HPS3-206ENST00000486530 UFSP1Q6NVU6 142 aa14.81□□□□□ -0.04
HPS3-206ENST00000486530 NACAE9PAV3 2078 aa14.81□□□□□ -0.04
HPS3-206ENST00000486530 RHOHQ15669 191 aa14.8□□□□□ -0.04
HPS3-206ENST00000486530 BEAN1Q3B7T3 259 aa14.8□□□□□ -0.04
HPS3-206ENST00000486530 CHTOPQ9Y3Y2 248 aaKnown RBP14.8□□□□□ -0.04
HPS3-206ENST00000486530 C1orf158Q8N1D5 194 aa14.8□□□□□ -0.04
HPS3-206ENST00000486530 RHODO00212 210 aa14.79□□□□□ -0.04
HPS3-206ENST00000486530 SIVA1O15304 175 aa14.79□□□□□ -0.04
HPS3-206ENST00000486530 I3L3M4 83 aa14.78□□□□□ -0.04
HPS3-206ENST00000486530 BVES-AS1Q5T3Y7 98 aa14.78□□□□□ -0.04
HPS3-206ENST00000486530 TMEM141Q96I45 108 aa14.78□□□□□ -0.04
HPS3-206ENST00000486530 TIMM17AQ99595 171 aa14.78□□□□□ -0.04
HPS3-206ENST00000486530 IGIPA6NJ69 53 aa14.78□□□□□ -0.04
HPS3-206ENST00000486530 CFAP126Q5VTH2 177 aa14.78□□□□□ -0.04
HPS3-206ENST00000486530 GTSCR1Q86UQ5 136 aa14.78□□□□□ -0.04
HPS3-206ENST00000486530 PCP2Q8IVA1 136 aa14.78□□□□□ -0.04
HPS3-206ENST00000486530 IGHV3-73A0A0B4J1V6 119 aa14.77□□□□□ -0.05
HPS3-206ENST00000486530 PF4P02776 101 aa14.77□□□□□ -0.05
HPS3-206ENST00000486530 C19orf73Q9NVV2 129 aa14.77□□□□□ -0.05
HPS3-206ENST00000486530 IGKV2D-26A0A0A0MRZ7 120 aa14.76□□□□□ -0.05
HPS3-206ENST00000486530 TSHBP01222 138 aa14.76□□□□□ -0.05
HPS3-206ENST00000486530 IL17DQ8TAD2 202 aa14.76□□□□□ -0.05
HPS3-206ENST00000486530 MRPL16Q9NX20 251 aaKnown RBP14.76□□□□□ -0.05
HPS3-206ENST00000486530 PRSS29PA6NIE9 313 aa14.76□□□□□ -0.05
HPS3-206ENST00000486530 RPL39P62891 51 aaKnown RBP14.76□□□□□ -0.05
HPS3-206ENST00000486530 ZMAT5Q9UDW3 170 aaKnown RBP14.76□□□□□ -0.05
HPS3-206ENST00000486530 IGHV3OR16-12A0A075B7B8 117 aa14.75□□□□□ -0.05
HPS3-206ENST00000486530 RS1O15537 224 aa14.75□□□□□ -0.05
HPS3-206ENST00000486530 AZU1P20160 251 aa14.75□□□□□ -0.05
HPS3-206ENST00000486530 DEFB104AQ8WTQ1 72 aa14.75□□□□□ -0.05
HPS3-206ENST00000486530 C2CD3Q4AC94 2353 aa14.75□□□□□ -0.05
HPS3-206ENST00000486530 LINC00469Q8N7U9 141 aa14.74□□□□□ -0.05
HPS3-206ENST00000486530 LINC00482Q8N8I6 264 aa14.74□□□□□ -0.05
HPS3-206ENST00000486530 RNASE8Q8TDE3 154 aaKnown RBP14.74□□□□□ -0.05
HPS3-206ENST00000486530 TMEM97Q5BJF2 176 aa14.74□□□□□ -0.05
HPS3-206ENST00000486530 TNFRSF18Q9Y5U5 241 aa14.74□□□□□ -0.05
HPS3-206ENST00000486530 PMVKQ15126 192 aa14.73□□□□□ -0.05
HPS3-206ENST00000486530 TMEM263Q8WUH6 116 aaKnown RBP14.73□□□□□ -0.05
HPS3-206ENST00000486530 WFDC10AQ9H1F0 79 aa14.73□□□□□ -0.05
HPS3-206ENST00000486530 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.72□□□□□ -0.05
HPS3-206ENST00000486530 C20orf203Q8NBC4 194 aa14.72□□□□□ -0.05
HPS3-206ENST00000486530 IGHV3-53P01767 116 aa14.72□□□□□ -0.05
HPS3-206ENST00000486530 GIG44P09565 113 aaPredicted RBP14.72□□□□□ -0.05
HPS3-206ENST00000486530 P0DMU3 169 aa14.72□□□□□ -0.05
HPS3-206ENST00000486530 FAM231AP0DMU4 169 aa14.72□□□□□ -0.05
HPS3-206ENST00000486530 FAM231CP0DMU5 169 aa14.72□□□□□ -0.05
HPS3-206ENST00000486530 ZNF25P17030 456 aaPredicted RBP14.72□□□□□ -0.05
HPS3-206ENST00000486530 HSD52Q0P140 79 aa14.72□□□□□ -0.05
HPS3-206ENST00000486530 C1QTNF4Q9BXJ3 329 aa14.72□□□□□ -0.05
HPS3-206ENST00000486530 PAPPA-AS1Q5QFB9 102 aa14.71□□□□□ -0.05
HPS3-206ENST00000486530 HIGD1BQ9P298 99 aa14.71□□□□□ -0.05
HPS3-206ENST00000486530 DNAJC30Q96LL9 226 aa14.7□□□□□ -0.06
HPS3-206ENST00000486530 Q6ZSN1 163 aa14.69□□□□□ -0.06
HPS3-206ENST00000486530 CST9LQ9H4G1 147 aa14.69□□□□□ -0.06
HPS3-206ENST00000486530 RPL35AP18077 110 aaKnown RBP14.69□□□□□ -0.06
HPS3-206ENST00000486530 SEC11AP67812 179 aa14.69□□□□□ -0.06
HPS3-206ENST00000486530 TRGV1A0A0A0MS02 117 aa14.68□□□□□ -0.06
HPS3-206ENST00000486530 TTTY13Q9BZ97 58 aa14.68□□□□□ -0.06
HPS3-206ENST00000486530 IGLV4-69A0A075B6H9 119 aa14.67□□□□□ -0.06
HPS3-206ENST00000486530 COX11Q9Y6N1 276 aa14.67□□□□□ -0.06
HPS3-206ENST00000486530 GAGE1Q13065 139 aa14.67□□□□□ -0.06
HPS3-206ENST00000486530 OR4C5Q8NGB2 326 aa14.67□□□□□ -0.06
HPS3-206ENST00000486530 C16orf74Q96GX8 76 aa14.67□□□□□ -0.06
HPS3-206ENST00000486530 OR11H2Q8NH07 326 aa14.66□□□□□ -0.06
HPS3-206ENST00000486530 ORAOV1Q8WV07 137 aa14.66□□□□□ -0.06
HPS3-206ENST00000486530 TRBV25-1A0A075B6N4 114 aa14.65□□□□□ -0.06
HPS3-206ENST00000486530 TRAV8-6A0A0B4J262 113 aa14.65□□□□□ -0.06
HPS3-206ENST00000486530 E9PLD3 99 aa14.65□□□□□ -0.06
HPS3-206ENST00000486530 INSL3P51460 131 aa14.65□□□□□ -0.06
HPS3-206ENST00000486530 DAZ2Q13117 558 aaKnown RBP14.65□□□□□ -0.06
HPS3-206ENST00000486530 NIPBLQ6KC79 2804 aaeCLIP14.65□□□□□ -0.06
HPS3-206ENST00000486530 C11orf86A6NJI1 115 aa14.65□□□□□ -0.06
HPS3-206ENST00000486530 CSNK1G2-AS1Q8NCQ2 148 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms