RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 HIST1H2BLQ99880 126 aa10.25□□□□□ -0.77
COL9A1-207ENST00000486080 DKK2Q9UBU2 259 aa10.25□□□□□ -0.77
COL9A1-207ENST00000486080 CELA1Q9UNI1 258 aa10.25□□□□□ -0.77
COL9A1-207ENST00000486080 IGLV2-18A0A075B6J9 118 aa10.24□□□□□ -0.77
COL9A1-207ENST00000486080 FABP4P15090 132 aa10.24□□□□□ -0.77
COL9A1-207ENST00000486080 SUMO2P61956 95 aaKnown RBP10.24□□□□□ -0.77
COL9A1-207ENST00000486080 FA2HQ7L5A8 372 aa10.24□□□□□ -0.77
COL9A1-207ENST00000486080 LYRM9A8MSI8 78 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 PRSS47A8MTI9 375 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 PMCHP20382 165 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 NEGR1Q7Z3B1 354 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
COL9A1-207ENST00000486080 C20orf78Q9BR46 151 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 ST20Q9HBF5 79 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 HSBP1O75506 76 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 PPP1R17O96001 155 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 Q8N8P6 123 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 SMIM2Q9BVW6 85 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 EDA2RQ9HAV5 297 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 NIT2Q9NQR4 276 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 AP5S1Q9NUS5 200 aa10.23□□□□□ -0.77
COL9A1-207ENST00000486080 H7C1H1 209 aa10.22□□□□□ -0.77
COL9A1-207ENST00000486080 AMTP48728 403 aa10.22□□□□□ -0.77
COL9A1-207ENST00000486080 DEFB104AQ8WTQ1 72 aa10.22□□□□□ -0.77
COL9A1-207ENST00000486080 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
COL9A1-207ENST00000486080 MEGF8Q7Z7M0 2845 aa10.22□□□□□ -0.77
COL9A1-207ENST00000486080 TRBV6-5A0A0K0K1A5 114 aa10.21□□□□□ -0.77
COL9A1-207ENST00000486080 TMEM18Q96B42 140 aa10.21□□□□□ -0.77
COL9A1-207ENST00000486080 TMEM70Q9BUB7 260 aa10.21□□□□□ -0.77
COL9A1-207ENST00000486080 IGHV1-24A0A0C4DH33 117 aa10.21□□□□□ -0.78
COL9A1-207ENST00000486080 SDHAF1A6NFY7 115 aa10.21□□□□□ -0.78
COL9A1-207ENST00000486080 LINC01546A6NGU7 62 aa10.21□□□□□ -0.78
COL9A1-207ENST00000486080 TCAPO15273 167 aa10.21□□□□□ -0.78
COL9A1-207ENST00000486080 POLR2KP53803 58 aaKnown RBP10.21□□□□□ -0.78
COL9A1-207ENST00000486080 FHL2Q14192 279 aa10.21□□□□□ -0.78
COL9A1-207ENST00000486080 SLC25A29Q8N8R3 303 aa10.21□□□□□ -0.78
COL9A1-207ENST00000486080 NEXN-AS1Q8NBZ9 246 aa10.21□□□□□ -0.78
COL9A1-207ENST00000486080 FBN3Q75N90 2809 aa10.2□□□□□ -0.78
COL9A1-207ENST00000486080 TRGV4A0A0C4DH28 118 aa10.2□□□□□ -0.78
COL9A1-207ENST00000486080 SPART-AS1P0CW21 52 aa10.2□□□□□ -0.78
COL9A1-207ENST00000486080 AKR1D1P51857 326 aa10.2□□□□□ -0.78
COL9A1-207ENST00000486080 C18orf15Q96N68 181 aa10.2□□□□□ -0.78
COL9A1-207ENST00000486080 TM2D3Q9BRN9 247 aa10.2□□□□□ -0.78
COL9A1-207ENST00000486080 PRKDCP78527 4128 aaKnown RBP10.2□□□□□ -0.78
COL9A1-207ENST00000486080 DAD1P61803 113 aa10.19□□□□□ -0.78
COL9A1-207ENST00000486080 OR10D4PQ8NGN7 298 aa10.19□□□□□ -0.78
COL9A1-207ENST00000486080 PACRGQ96M98 296 aaPredicted RBP10.19□□□□□ -0.78
COL9A1-207ENST00000486080 SPATA25Q9BR10 227 aa10.19□□□□□ -0.78
COL9A1-207ENST00000486080 A0A096LNJ9 63 aa10.19□□□□□ -0.78
COL9A1-207ENST00000486080 K7EQD1 137 aa10.19□□□□□ -0.78
COL9A1-207ENST00000486080 RPL32P62910 135 aaKnown RBP10.19□□□□□ -0.78
COL9A1-207ENST00000486080 TNFRSF18Q9Y5U5 241 aa10.19□□□□□ -0.78
COL9A1-207ENST00000486080 VCYO14598 125 aa10.18□□□□□ -0.78
COL9A1-207ENST00000486080 CIDEAO60543 219 aa10.18□□□□□ -0.78
COL9A1-207ENST00000486080 A0A0J9YWU9 116 aa10.17□□□□□ -0.78
COL9A1-207ENST00000486080 TRBV27A0A0K0K1C4 114 aa10.17□□□□□ -0.78
COL9A1-207ENST00000486080 LAGE3Q14657 143 aa10.17□□□□□ -0.78
COL9A1-207ENST00000486080 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
COL9A1-207ENST00000486080 LOC100131303A0A0U1RQF7 123 aa10.17□□□□□ -0.78
COL9A1-207ENST00000486080 ZNRF2Q8NHG8 242 aa10.17□□□□□ -0.78
COL9A1-207ENST00000486080 C11orf68Q9H3H3 251 aaKnown RBP10.17□□□□□ -0.78
COL9A1-207ENST00000486080 TRBV6-4A0A1B0GX49 114 aa10.16□□□□□ -0.78
COL9A1-207ENST00000486080 C12orf74Q32Q52 190 aa10.16□□□□□ -0.78
COL9A1-207ENST00000486080 DNAJC30Q96LL9 226 aa10.16□□□□□ -0.78
COL9A1-207ENST00000486080 HHLA3Q9XRX5 114 aa10.16□□□□□ -0.78
COL9A1-207ENST00000486080 IGHV3-38A0A0C4DH36 116 aa10.15□□□□□ -0.78
COL9A1-207ENST00000486080 TRBV10-1A0A0K0K1A3 114 aa10.15□□□□□ -0.78
COL9A1-207ENST00000486080 HUWE1Q7Z6Z7 4374 aaKnown RBP10.15□□□□□ -0.78
COL9A1-207ENST00000486080 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 GAGE12JA6NER3 117 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 I3L3M4 83 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 TSHBP01222 138 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 HBDP02042 147 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 FCER1GP30273 86 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 GAGE1Q13065 139 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 GAGE4Q13068 117 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 GAGE5Q13069 117 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 GAGE13Q4V321 117 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 PHLDA1Q8WV24 401 aaPredicted RBP10.14□□□□□ -0.79
COL9A1-207ENST00000486080 KIR2DL4Q99706 377 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 COL7A1Q02388 2944 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 LEPROTL1O95214 131 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 NUDT3O95989 172 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 ATP5G1P05496 136 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 HTN3P15516 51 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 CRYBA4P53673 196 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 RHOHQ15669 191 aa10.14□□□□□ -0.79
COL9A1-207ENST00000486080 TEX48A0A1B0GUV7 120 aa10.13□□□□□ -0.79
COL9A1-207ENST00000486080 BTF3P20290 206 aaKnown RBP10.13□□□□□ -0.79
COL9A1-207ENST00000486080 RPL36AP83881 106 aaKnown RBP10.13□□□□□ -0.79
COL9A1-207ENST00000486080 ORMDL2Q53FV1 153 aa10.13□□□□□ -0.79
COL9A1-207ENST00000486080 RPL36ALQ969Q0 106 aaKnown RBP10.13□□□□□ -0.79
COL9A1-207ENST00000486080 F5H768 121 aa10.12□□□□□ -0.79
COL9A1-207ENST00000486080 K7EMI3 77 aa10.12□□□□□ -0.79
COL9A1-207ENST00000486080 UBE2D3P61077 147 aa10.12□□□□□ -0.79
COL9A1-207ENST00000486080 UBE2D2P62837 147 aa10.12□□□□□ -0.79
COL9A1-207ENST00000486080 PRADC1Q9BSG0 188 aa10.12□□□□□ -0.79
COL9A1-207ENST00000486080 PRO0255Q9UI72 69 aa10.12□□□□□ -0.79
COL9A1-207ENST00000486080 DNAH9Q9NYC9 4486 aa10.12□□□□□ -0.79
COL9A1-207ENST00000486080 KRTDAPP60985 99 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms