RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 Q8N8P6 123 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 OR11H2Q8NH07 326 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 OVOL2Q9BRP0 275 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 ST20Q9HBF5 79 aa6.86□□□□□ -1.31
CTSA-208ENST00000485627 TRAV4A0A0B4J268 109 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 GAGE12BA1L429 117 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 PRSS47A8MTI9 375 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 A8MZ25 164 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 GAGE7O76087 117 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 GAGE12FP0CL80 117 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 GAGE12GP0CL81 117 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 GAGE12IP0CL82 117 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 ZFP2Q6ZN57 461 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 Q6ZTI0 123 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 RPL39LQ96EH5 51 aaKnown RBP6.85□□□□□ -1.31
CTSA-208ENST00000485627 URB1-AS1Q96HZ7 61 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 SMIM2Q9BVW6 85 aa6.85□□□□□ -1.31
CTSA-208ENST00000485627 IGHV1-24A0A0C4DH33 117 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 M0QY20 66 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 CIDEAO60543 219 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 LEPROTL1O95214 131 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 MIFP14174 115 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 RNF183Q96D59 192 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 KIR2DL4Q99706 377 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 NIT2Q9NQR4 276 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 HSPB8Q9UJY1 196 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 TNFRSF18Q9Y5U5 241 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 X6R8D5 127 aa6.84□□□□□ -1.31
CTSA-208ENST00000485627 TRBV6-5A0A0K0K1A5 114 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 PLAC8L1A1L4L8 177 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 LYRM9A8MSI8 78 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 K7EMI3 77 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 VCYO14598 125 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 IGHV3-53P01767 116 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 HBDP02042 147 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 KRTDAPP60985 99 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 RPL32P62910 135 aaKnown RBP6.83□□□□□ -1.32
CTSA-208ENST00000485627 LAGE3Q14657 143 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 ORMDL2Q53FV1 153 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 UFSP1Q6NVU6 142 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 EDA2RQ9HAV5 297 aa6.83□□□□□ -1.32
CTSA-208ENST00000485627 TRGV4A0A0C4DH28 118 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 IGHV4-28A0A0C4DH34 117 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 SDHAF1A6NFY7 115 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 LINC01546A6NGU7 62 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 TCAPO15273 167 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 NUDT3O95989 172 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 SMIM6P0DI80 62 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 DEFB130BP0DP73 79 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 DEFB130AP0DP74 79 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 BTF3P20290 206 aaKnown RBP6.82□□□□□ -1.32
CTSA-208ENST00000485627 G0S2P27469 103 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 FCER1GP30273 86 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 DNAJC30Q96LL9 226 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 TMEM70Q9BUB7 260 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 TP53TG1Q9Y2A0 90 aa6.82□□□□□ -1.32
CTSA-208ENST00000485627 IGLV2-18A0A075B6J9 118 aa6.81□□□□□ -1.32
CTSA-208ENST00000485627 SCGB1D1O95968 90 aa6.81□□□□□ -1.32
CTSA-208ENST00000485627 POLR2KP53803 58 aaKnown RBP6.81□□□□□ -1.32
CTSA-208ENST00000485627 ZNF479Q96JC4 524 aa6.81□□□□□ -1.32
CTSA-208ENST00000485627 MAP1LC3CQ9BXW4 147 aa6.81□□□□□ -1.32
CTSA-208ENST00000485627 TEX48A0A1B0GUV7 120 aa6.8□□□□□ -1.32
CTSA-208ENST00000485627 I3L3M4 83 aa6.8□□□□□ -1.32
CTSA-208ENST00000485627 K7EQD1 137 aa6.8□□□□□ -1.32
CTSA-208ENST00000485627 P0DMU3 169 aa6.8□□□□□ -1.32
CTSA-208ENST00000485627 FAM231AP0DMU4 169 aa6.8□□□□□ -1.32
CTSA-208ENST00000485627 FAM231CP0DMU5 169 aa6.8□□□□□ -1.32
CTSA-208ENST00000485627 DAD1P61803 113 aa6.8□□□□□ -1.32
CTSA-208ENST00000485627 RPL36AP83881 106 aaKnown RBP6.8□□□□□ -1.32
CTSA-208ENST00000485627 JOSD1Q15040 202 aaPredicted RBP6.8□□□□□ -1.32
CTSA-208ENST00000485627 DEFB121Q5J5C9 76 aa6.8□□□□□ -1.32
CTSA-208ENST00000485627 FAM222AQ5U5X8 452 aa6.8□□□□□ -1.32
CTSA-208ENST00000485627 RPL36ALQ969Q0 106 aaKnown RBP6.8□□□□□ -1.32
CTSA-208ENST00000485627 C12orf57Q99622 126 aa6.8□□□□□ -1.32
CTSA-208ENST00000485627 TRBV10-1A0A0K0K1A3 114 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 C20orf202A1L168 122 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 LINC01549A6NIU2 74 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 DEFB4AO15263 64 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 C3orf79P0CE67 100 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 SPART-AS1P0CW21 52 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 PYY3Q5JQD4 70 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 Q6ZSN1 163 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 NEGR1Q7Z3B1 354 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 LINC00518Q8N0U6 118 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 Q8NAQ8 132 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 NEXN-AS1Q8NBZ9 246 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 PRADC1Q9BSG0 188 aa6.79□□□□□ -1.32
CTSA-208ENST00000485627 TRBV6-4A0A1B0GX49 114 aa6.78□□□□□ -1.32
CTSA-208ENST00000485627 ATP5LO75964 103 aa6.78□□□□□ -1.32
CTSA-208ENST00000485627 S100A12P80511 92 aa6.78□□□□□ -1.32
CTSA-208ENST00000485627 RHOHQ15669 191 aa6.78□□□□□ -1.32
CTSA-208ENST00000485627 KPRPQ5T749 579 aaPredicted RBP6.78□□□□□ -1.32
CTSA-208ENST00000485627 LINC00612Q8N6U2 182 aa6.78□□□□□ -1.32
CTSA-208ENST00000485627 SLC25A29Q8N8R3 303 aa6.78□□□□□ -1.32
CTSA-208ENST00000485627 ZNRF2Q8NHG8 242 aa6.78□□□□□ -1.32
CTSA-208ENST00000485627 C18orf15Q96N68 181 aa6.78□□□□□ -1.32
CTSA-208ENST00000485627 DKK2Q9UBU2 259 aa6.78□□□□□ -1.32
CTSA-208ENST00000485627 TRBV7-3A0A075B6L6 115 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms