RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 GZMBP10144 247 aa3.13□□□□□ -1.91
PTPN4-210ENST00000485247 S100A4P26447 101 aaKnown RBP3.13□□□□□ -1.91
PTPN4-210ENST00000485247 RPL29P47914 159 aaKnown RBP3.13□□□□□ -1.91
PTPN4-210ENST00000485247 ZNF80P51504 273 aaPredicted RBP3.13□□□□□ -1.91
PTPN4-210ENST00000485247 PKIAP61925 76 aa3.13□□□□□ -1.91
PTPN4-210ENST00000485247 CYCSP99999 105 aaKnown RBP3.13□□□□□ -1.91
PTPN4-210ENST00000485247 CST9LP1Q5W188 147 aa3.13□□□□□ -1.91
PTPN4-210ENST00000485247 MIR17HGQ75NE6 70 aa3.13□□□□□ -1.91
PTPN4-210ENST00000485247 C15orf40Q8WUR7 153 aa3.13□□□□□ -1.91
PTPN4-210ENST00000485247 SGK494Q96LW2 274 aa3.13□□□□□ -1.91
PTPN4-210ENST00000485247 SLIRPQ9GZT3 109 aaKnown RBP3.13□□□□□ -1.91
PTPN4-210ENST00000485247 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
PTPN4-210ENST00000485247 IGLV5-45A0A087WSX0 123 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 TRBV10-1A0A0K0K1A3 114 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 UBE2L5PA0A1B0GUS4 154 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 A0A1W2PNN7 141 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 CST7O76096 145 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 SFT2D2O95562 160 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 RAB2AP61019 212 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 NCS1P62166 190 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 BAXQ07812 192 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 PPP1R1AQ13522 171 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 TPRXLQ17RH7 258 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 NTM-AS1Q6ZSK4 140 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 GOLT1AQ6ZVE7 132 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 C20orf203Q8NBC4 194 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 KRTAP4-1Q9BYQ7 146 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 UQCC1Q9NVA1 299 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 WDR83OSQ9Y284 106 aa3.12□□□□□ -1.91
PTPN4-210ENST00000485247 ANKRD20A5PA0PJZ0 165 aa3.11□□□□□ -1.91
PTPN4-210ENST00000485247 C7orf66A4D0T2 115 aa3.11□□□□□ -1.91
PTPN4-210ENST00000485247 OR7C2O60412 319 aa3.11□□□□□ -1.91
PTPN4-210ENST00000485247 GCGP01275 180 aa3.11□□□□□ -1.91
PTPN4-210ENST00000485247 TAS2R30P59541 319 aa3.11□□□□□ -1.91
PTPN4-210ENST00000485247 EIF5AP63241 154 aaKnown RBP3.11□□□□□ -1.91
PTPN4-210ENST00000485247 PRR27Q6MZM9 219 aa3.11□□□□□ -1.91
PTPN4-210ENST00000485247 PHF5AQ7RTV0 110 aaKnown RBP3.11□□□□□ -1.91
PTPN4-210ENST00000485247 CMTM2Q8TAZ6 248 aa3.11□□□□□ -1.91
PTPN4-210ENST00000485247 SMIM4Q8WVI0 70 aa3.11□□□□□ -1.91
PTPN4-210ENST00000485247 OR5AC2Q9NZP5 309 aa3.11□□□□□ -1.91
PTPN4-210ENST00000485247 IGLV4-60A0A075B6I1 120 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 IGLV7-46A0A075B6I9 117 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 TRBV25-1A0A075B6N4 114 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 A0A087WZ39 114 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 GVQW2A0A096LPI5 108 aaPredicted RBP3.1□□□□□ -1.91
PTPN4-210ENST00000485247 IGKV3D-20A0A0C4DH25 116 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 H3BVH4 76 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 FGF7P21781 194 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 BCAP31P51572 246 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 VBP1P61758 197 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 GNG5P63218 68 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 UBE2L3P68036 154 aaKnown RBP3.1□□□□□ -1.91
PTPN4-210ENST00000485247 MRPS10P82664 201 aaKnown RBP3.1□□□□□ -1.91
PTPN4-210ENST00000485247 SPANXN2Q5MJ10 180 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.1□□□□□ -1.91
PTPN4-210ENST00000485247 OR10G8Q8NGN5 311 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 LINC00526Q96FQ7 95 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 NDFIP1Q9BT67 221 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 DERL1Q9BUN8 251 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 GSKIPQ9P0R6 139 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 PKIGQ9Y2B9 76 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 PHLDA3Q9Y5J5 127 aa3.1□□□□□ -1.91
PTPN4-210ENST00000485247 IGKV3OR2-268A0A0C4DH90 116 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 L7N2F9 121 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 M0R381 172 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 EIF3GO75821 320 aaKnown RBP eCLIP3.09□□□□□ -1.91
PTPN4-210ENST00000485247 SULT1A2P50226 295 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 IAH1Q2TAA2 248 aaPredicted RBP3.09□□□□□ -1.91
PTPN4-210ENST00000485247 C9orf116Q5BN46 136 aaPredicted RBP3.09□□□□□ -1.91
PTPN4-210ENST00000485247 KRTAP7-1Q8IUC3 87 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 OR11H4Q8NGC9 324 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 MCFD2Q8NI22 146 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 MITD1Q8WV92 249 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 AP3S1Q92572 193 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 SFRP2Q96HF1 295 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 CARD19Q96LW7 228 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 NPCDR1Q9BY65 106 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 MIXL1Q9H2W2 232 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 OTORQ9NRC9 128 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 LYRM2Q9NU23 88 aaPredicted RBP3.09□□□□□ -1.91
PTPN4-210ENST00000485247 IL36BQ9NZH7 164 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 RAB26Q9ULW5 256 aa3.09□□□□□ -1.91
PTPN4-210ENST00000485247 TRBV6-1A0A0K0K1D8 114 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 RGS5O15539 181 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 ARMS2P0C7Q2 107 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 MT1HP80294 61 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 IL18Q14116 193 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 ZNF56Q15929 161 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 ZNF674Q2M3X9 581 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 ZFP69Q49AA0 526 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 SMUG1Q53HV7 270 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 TMEM97Q5BJF2 176 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 FAM74A1Q5RGS3 127 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 FAM162BQ5T6X4 162 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 KRTAP11-1Q8IUC1 163 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 AQP10Q96PS8 301 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 RPP21Q9H633 154 aaKnown RBP3.08□□□□□ -1.92
PTPN4-210ENST00000485247 MBD2Q9UBB5 411 aa3.08□□□□□ -1.92
PTPN4-210ENST00000485247 CARHSP1Q9Y2V2 147 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms