RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 TMEM136Q6ZRR5 245 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 LINC00612Q8N6U2 182 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 TMEM191AQ9H0A3 160 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 EDA2RQ9HAV5 297 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 KIF25-AS1Q9Y6Z4 181 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 TRAV9-1A0A075B6T8 112 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 TRAV26-1A0A087WT03 109 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 DEFB131BA0A096LNP1 70 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 LOC100131303A0A0U1RQF7 123 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 RAB4AP20338 218 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 LINC00315P59091 139 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 FABP9Q0Z7S8 132 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 FHL2Q14192 279 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 SLC25A29Q8N8R3 303 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 HHLA3Q9XRX5 114 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 TRAPPC1Q9Y5R8 145 aa4.53□□□□□ -1.68
HERC4-210ENST00000480158 A0A096LPF7 62 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 TEX48A0A1B0GUV7 120 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 A0A1B0GW15 77 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 SCGB1D1O95968 90 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 APCSP02743 223 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 S100A8P05109 93 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 RAB5AP20339 215 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 MRPL51Q4U2R6 128 aaKnown RBP4.52□□□□□ -1.69
HERC4-210ENST00000480158 FAM104BQ5XKR9 115 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 SUMO4Q6EEV6 95 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 UFSP1Q6NVU6 142 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 PTH2Q96A98 100 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 RNF185Q96GF1 192 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 FAM30AQ9NZY2 134 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 NACAE9PAV3 2078 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 D6R8Y8 96 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 TRGC2P03986 189 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 CKS2P33552 79 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 PIK3CD-AS1Q5SR53 167 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 GATD1Q8NB37 220 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 RPL39LQ96EH5 51 aaKnown RBP4.52□□□□□ -1.69
HERC4-210ENST00000480158 GNB1LQ9BYB4 327 aa4.52□□□□□ -1.69
HERC4-210ENST00000480158 RHODO00212 210 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 ZFAND6Q6FIF0 208 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 PHLDA1Q8WV24 401 aaPredicted RBP4.51□□□□□ -1.69
HERC4-210ENST00000480158 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 IGLL5B9A064 214 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 M0QY20 66 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 PAX4O43316 350 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 HLA-DQA1P01909 254 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 GAGE1Q13065 139 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 GAGE4Q13068 117 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 GAGE5Q13069 117 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 GAGE13Q4V321 117 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 RASL11AQ6T310 242 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 ZFP2Q6ZN57 461 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 NDUFAF3Q9BU61 184 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 PRO0255Q9UI72 69 aa4.51□□□□□ -1.69
HERC4-210ENST00000480158 IGHV3-38A0A0C4DH36 116 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 LOC389332A0A1B0GUA5 103 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 K7EQD1 137 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 NUDT3O95989 172 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 CRYBA4P53673 196 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 NEGR1Q7Z3B1 354 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 ZNRF2Q8NHG8 242 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 VSIG2Q96IQ7 327 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 C18orf15Q96N68 181 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 TRAV10A0A0B4J240 114 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 SRIP30626 198 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 ORMDL3Q8N138 153 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 PRELID3AQ96N28 172 aa4.5□□□□□ -1.69
HERC4-210ENST00000480158 TENM2Q9NT68 2774 aa4.49□□□□□ -1.69
HERC4-210ENST00000480158 TRBV6-4A0A1B0GX49 114 aa4.49□□□□□ -1.69
HERC4-210ENST00000480158 NPYP01303 97 aa4.49□□□□□ -1.69
HERC4-210ENST00000480158 MT-ND6P03923 174 aa4.49□□□□□ -1.69
HERC4-210ENST00000480158 RHOHQ15669 191 aa4.49□□□□□ -1.69
HERC4-210ENST00000480158 OR10J3Q5JRS4 329 aa4.49□□□□□ -1.69
HERC4-210ENST00000480158 NEXN-AS1Q8NBZ9 246 aa4.49□□□□□ -1.69
HERC4-210ENST00000480158 PRADC1Q9BSG0 188 aa4.49□□□□□ -1.69
HERC4-210ENST00000480158 TNFRSF18Q9Y5U5 241 aa4.49□□□□□ -1.69
HERC4-210ENST00000480158 CSMD3Q7Z407 3707 aa4.49□□□□□ -1.69
HERC4-210ENST00000480158 H7C1H1 209 aa4.48□□□□□ -1.69
HERC4-210ENST00000480158 IQCJQ1A5X6 159 aa4.48□□□□□ -1.69
HERC4-210ENST00000480158 COX19Q49B96 90 aa4.48□□□□□ -1.69
HERC4-210ENST00000480158 DGAT2L7PQ6IED9 249 aa4.48□□□□□ -1.69
HERC4-210ENST00000480158 MRAP2Q96G30 205 aa4.48□□□□□ -1.69
HERC4-210ENST00000480158 NIT2Q9NQR4 276 aa4.48□□□□□ -1.69
HERC4-210ENST00000480158 NRACQ8N912 160 aa4.48□□□□□ -1.69
HERC4-210ENST00000480158 C12orf57Q99622 126 aa4.48□□□□□ -1.69
HERC4-210ENST00000480158 ALKBH7Q9BT30 221 aaPredicted RBP4.48□□□□□ -1.69
HERC4-210ENST00000480158 TRBV7-3A0A075B6L6 115 aa4.47□□□□□ -1.69
HERC4-210ENST00000480158 SDHAF1A6NFY7 115 aa4.47□□□□□ -1.69
HERC4-210ENST00000480158 CIDEAO60543 219 aa4.47□□□□□ -1.69
HERC4-210ENST00000480158 RPL36AP83881 106 aaKnown RBP4.47□□□□□ -1.69
HERC4-210ENST00000480158 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
HERC4-210ENST00000480158 RPL36ALQ969Q0 106 aaKnown RBP4.47□□□□□ -1.69
HERC4-210ENST00000480158 ST20Q9HBF5 79 aa4.47□□□□□ -1.69
HERC4-210ENST00000480158 B5MCH6 92 aa4.47□□□□□ -1.69
HERC4-210ENST00000480158 PPBPP02775 128 aa4.47□□□□□ -1.69
HERC4-210ENST00000480158 SUMO2P61956 95 aaKnown RBP4.47□□□□□ -1.69
HERC4-210ENST00000480158 CEMP1Q6PRD7 247 aaPredicted RBP4.47□□□□□ -1.69
HERC4-210ENST00000480158 MUC7Q8TAX7 377 aa4.47□□□□□ -1.69
HERC4-210ENST00000480158 WWC2-AS2Q96NR7 200 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms