RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 GYPEP15421 78 aa8.74□□□□□ -1.01
TRAPPC12-218ENST00000479897 RPL36AP83881 106 aaKnown RBP8.74□□□□□ -1.01
TRAPPC12-218ENST00000479897 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
TRAPPC12-218ENST00000479897 ORMDL3Q8N138 153 aa8.74□□□□□ -1.01
TRAPPC12-218ENST00000479897 NRACQ8N912 160 aa8.74□□□□□ -1.01
TRAPPC12-218ENST00000479897 RPL36ALQ969Q0 106 aaKnown RBP8.74□□□□□ -1.01
TRAPPC12-218ENST00000479897 MRPL18Q9H0U6 180 aaKnown RBP8.74□□□□□ -1.01
TRAPPC12-218ENST00000479897 ICOSQ9Y6W8 199 aa8.74□□□□□ -1.01
TRAPPC12-218ENST00000479897 TRBV7-3A0A075B6L6 115 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 LOC100131303A0A0U1RQF7 123 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 D6R8Y8 96 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 C3orf84H3BNL1 204 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 NCR2O95944 276 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 APCSP02743 223 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 P0DMU3 169 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 FAM231AP0DMU4 169 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 FAM231CP0DMU5 169 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 RAB5AP20339 215 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 CKS2P33552 79 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 UBE2D3P61077 147 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 UBE2D2P62837 147 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 MRPL23Q16540 153 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 TRAPPC1Q9Y5R8 145 aa8.73□□□□□ -1.01
TRAPPC12-218ENST00000479897 A0A096LPF7 62 aa8.72□□□□□ -1.01
TRAPPC12-218ENST00000479897 SMKR1H3BMG3 65 aa8.72□□□□□ -1.01
TRAPPC12-218ENST00000479897 GAS8-AS1O95177 125 aa8.72□□□□□ -1.01
TRAPPC12-218ENST00000479897 SRIP30626 198 aa8.72□□□□□ -1.01
TRAPPC12-218ENST00000479897 RPS10P46783 165 aaKnown RBP8.72□□□□□ -1.01
TRAPPC12-218ENST00000479897 RPL32P62910 135 aaKnown RBP8.72□□□□□ -1.01
TRAPPC12-218ENST00000479897 OR10J3Q5JRS4 329 aa8.72□□□□□ -1.01
TRAPPC12-218ENST00000479897 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
TRAPPC12-218ENST00000479897 Q9UF83 564 aa8.72□□□□□ -1.01
TRAPPC12-218ENST00000479897 GAGE12JA6NER3 117 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 IGLL5B9A064 214 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 GAGE1Q13065 139 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 GAGE4Q13068 117 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 GAGE5Q13069 117 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 GAGE13Q4V321 117 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 ZNRF2Q8NHG8 242 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 PRELID3AQ96N28 172 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 C20orf78Q9BR46 151 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 APLNQ9ULZ1 77 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 TNFRSF18Q9Y5U5 241 aa8.71□□□□□ -1.02
TRAPPC12-218ENST00000479897 SDHAF1A6NFY7 115 aa8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 PRSS47A8MTI9 375 aa8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 TNFRSF6BO95407 300 aa8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 NPYP01303 97 aa8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 POLR2KP53803 58 aaKnown RBP8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 TIRAPP58753 221 aa8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 SUMO2P61956 95 aaKnown RBP8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 FABP9Q0Z7S8 132 aa8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 NEGR1Q7Z3B1 354 aa8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 DAZ4Q86SG3 579 aaKnown RBP8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 TMEM70Q9BUB7 260 aa8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 ST20Q9HBF5 79 aa8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 DAZ3Q9NR90 486 aaKnown RBP8.7□□□□□ -1.02
TRAPPC12-218ENST00000479897 TRBV27A0A0K0K1C4 114 aa8.69□□□□□ -1.02
TRAPPC12-218ENST00000479897 NUDT3O95989 172 aa8.69□□□□□ -1.02
TRAPPC12-218ENST00000479897 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
TRAPPC12-218ENST00000479897 CASC10Q5T4H9 136 aa8.69□□□□□ -1.02
TRAPPC12-218ENST00000479897 ZFAND6Q6FIF0 208 aa8.69□□□□□ -1.02
TRAPPC12-218ENST00000479897 ATP6V0E2Q8NHE4 81 aa8.69□□□□□ -1.02
TRAPPC12-218ENST00000479897 ALKBH7Q9BT30 221 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC12-218ENST00000479897 TMEM97Q5BJF2 176 aa8.68□□□□□ -1.02
TRAPPC12-218ENST00000479897 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC12-218ENST00000479897 SMIM2Q9BVW6 85 aa8.68□□□□□ -1.02
TRAPPC12-218ENST00000479897 GTSF1LQ9H1H1 148 aa8.68□□□□□ -1.02
TRAPPC12-218ENST00000479897 TRGC2P03986 189 aa8.67□□□□□ -1.02
TRAPPC12-218ENST00000479897 MAP1LC3AQ9H492 121 aa8.67□□□□□ -1.02
TRAPPC12-218ENST00000479897 IGLV2-18A0A075B6J9 118 aa8.66□□□□□ -1.02
TRAPPC12-218ENST00000479897 I3L3M4 83 aa8.66□□□□□ -1.02
TRAPPC12-218ENST00000479897 PLECQ15149 4684 aaKnown RBP8.66□□□□□ -1.02
TRAPPC12-218ENST00000479897 VCYO14598 125 aa8.65□□□□□ -1.02
TRAPPC12-218ENST00000479897 TCAPO15273 167 aa8.65□□□□□ -1.02
TRAPPC12-218ENST00000479897 PMCHP20382 165 aa8.65□□□□□ -1.02
TRAPPC12-218ENST00000479897 LYPD5Q6UWN5 251 aa8.65□□□□□ -1.02
TRAPPC12-218ENST00000479897 C18orf32Q8TCD1 76 aa8.65□□□□□ -1.02
TRAPPC12-218ENST00000479897 NXT2Q9NPJ8 142 aaKnown RBP8.65□□□□□ -1.02
TRAPPC12-218ENST00000479897 TENM2Q9NT68 2774 aa8.64□□□□□ -1.03
TRAPPC12-218ENST00000479897 K7EMI3 77 aa8.64□□□□□ -1.03
TRAPPC12-218ENST00000479897 COTL1Q14019 142 aa8.64□□□□□ -1.03
TRAPPC12-218ENST00000479897 IQCJQ1A5X6 159 aa8.64□□□□□ -1.03
TRAPPC12-218ENST00000479897 ESRGQ1W209 222 aa8.64□□□□□ -1.03
TRAPPC12-218ENST00000479897 LELP1Q5T871 98 aa8.64□□□□□ -1.03
TRAPPC12-218ENST00000479897 Q8N8P6 123 aa8.64□□□□□ -1.03
TRAPPC12-218ENST00000479897 KIR2DL4Q99706 377 aa8.64□□□□□ -1.03
TRAPPC12-218ENST00000479897 UPK3BQ9BT76 320 aa8.64□□□□□ -1.03
TRAPPC12-218ENST00000479897 MRPS16Q9Y3D3 137 aaKnown RBP8.64□□□□□ -1.03
TRAPPC12-218ENST00000479897 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
TRAPPC12-218ENST00000479897 IGHV3-38A0A0C4DH36 116 aa8.63□□□□□ -1.03
TRAPPC12-218ENST00000479897 LINC01546A6NGU7 62 aa8.63□□□□□ -1.03
TRAPPC12-218ENST00000479897 TSHBP01222 138 aa8.63□□□□□ -1.03
TRAPPC12-218ENST00000479897 CCL18P55774 89 aa8.63□□□□□ -1.03
TRAPPC12-218ENST00000479897 NTM-AS1Q6ZSK4 140 aa8.63□□□□□ -1.03
TRAPPC12-218ENST00000479897 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
TRAPPC12-218ENST00000479897 LYSTQ99698 3801 aa8.62□□□□□ -1.03
TRAPPC12-218ENST00000479897 TRBV25-1A0A075B6N4 114 aa8.61□□□□□ -1.03
TRAPPC12-218ENST00000479897 IGHV1-24A0A0C4DH33 117 aa8.61□□□□□ -1.03
TRAPPC12-218ENST00000479897 ESDP10768 282 aa8.61□□□□□ -1.03
TRAPPC12-218ENST00000479897 Q0VG73 95 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms