RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 VMO1Q7Z5L0 202 aa11.46□□□□□ -0.57
CLSTN1-205ENST00000477264 ZNRF2Q8NHG8 242 aa11.46□□□□□ -0.57
CLSTN1-205ENST00000477264 TRBV6-5A0A0K0K1A5 114 aa11.45□□□□□ -0.58
CLSTN1-205ENST00000477264 EIF4EBP3O60516 100 aaPredicted RBP11.45□□□□□ -0.58
CLSTN1-205ENST00000477264 RHOHQ15669 191 aa11.45□□□□□ -0.58
CLSTN1-205ENST00000477264 C1orf122Q6ZSJ8 110 aa11.45□□□□□ -0.58
CLSTN1-205ENST00000477264 Q8N9W7 124 aa11.45□□□□□ -0.58
CLSTN1-205ENST00000477264 KIF25-AS1Q9Y6Z4 181 aa11.45□□□□□ -0.58
CLSTN1-205ENST00000477264 ARHGAP32A7KAX9 2087 aa11.45□□□□□ -0.58
CLSTN1-205ENST00000477264 PLA2G2AP14555 144 aa11.45□□□□□ -0.58
CLSTN1-205ENST00000477264 EMP1P54849 157 aa11.45□□□□□ -0.58
CLSTN1-205ENST00000477264 CLEC19AQ6UXS0 136 aa11.45□□□□□ -0.58
CLSTN1-205ENST00000477264 TRBV27A0A0K0K1C4 114 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 TRBV7-7A0A0K0K1E9 115 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 ATP5J2P56134 94 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 NSUN5P1Q3KNT7 163 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 DEFB121Q5J5C9 76 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 FAM19A4Q96LR4 140 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 BPESC1Q9GZL8 116 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 RNASE3P12724 160 aaKnown RBP11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 LINC00315P59091 139 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 C2orf82Q6UX34 121 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 MUSTN1Q8IVN3 82 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
CLSTN1-205ENST00000477264 TEX49A0A1B0GTD5 131 aa11.43□□□□□ -0.58
CLSTN1-205ENST00000477264 COX6CP09669 75 aa11.43□□□□□ -0.58
CLSTN1-205ENST00000477264 ECSCRQ19T08 205 aa11.43□□□□□ -0.58
CLSTN1-205ENST00000477264 PIMREGQ9BSJ6 248 aa11.43□□□□□ -0.58
CLSTN1-205ENST00000477264 MEIG1Q5JSS6 88 aa11.43□□□□□ -0.58
CLSTN1-205ENST00000477264 TRIAP1O43715 76 aa11.42□□□□□ -0.58
CLSTN1-205ENST00000477264 RPL39P62891 51 aaKnown RBP11.42□□□□□ -0.58
CLSTN1-205ENST00000477264 SUMO4Q6EEV6 95 aa11.42□□□□□ -0.58
CLSTN1-205ENST00000477264 C20orf173Q96LM9 149 aa11.42□□□□□ -0.58
CLSTN1-205ENST00000477264 CRYBG3Q68DQ2 2970 aa11.42□□□□□ -0.58
CLSTN1-205ENST00000477264 IGHV3OR16-13A0A075B7E8 117 aa11.41□□□□□ -0.58
CLSTN1-205ENST00000477264 IGHV3-74A0A0B4J1X5 117 aa11.41□□□□□ -0.58
CLSTN1-205ENST00000477264 H7C2G1 150 aa11.41□□□□□ -0.58
CLSTN1-205ENST00000477264 ATP6V0E1O15342 81 aa11.41□□□□□ -0.58
CLSTN1-205ENST00000477264 IMUPQ9GZP8 106 aa11.41□□□□□ -0.58
CLSTN1-205ENST00000477264 ZNF22P17026 224 aaPredicted RBP11.4□□□□□ -0.58
CLSTN1-205ENST00000477264 NRGNQ92686 78 aa11.4□□□□□ -0.58
CLSTN1-205ENST00000477264 SPANXCQ9NY87 97 aa11.4□□□□□ -0.58
CLSTN1-205ENST00000477264 ICOSQ9Y6W8 199 aa11.4□□□□□ -0.58
CLSTN1-205ENST00000477264 TACC2O95359 2948 aa11.4□□□□□ -0.59
CLSTN1-205ENST00000477264 J3KRW8 73 aa11.4□□□□□ -0.59
CLSTN1-205ENST00000477264 SOCS3O14543 225 aa11.4□□□□□ -0.59
CLSTN1-205ENST00000477264 IGF1P05019 195 aa11.4□□□□□ -0.59
CLSTN1-205ENST00000477264 TMEM101Q96IK0 257 aa11.4□□□□□ -0.59
CLSTN1-205ENST00000477264 IGHV3-49A0A0A0MS15 119 aa11.39□□□□□ -0.59
CLSTN1-205ENST00000477264 ACYP1P07311 99 aa11.39□□□□□ -0.59
CLSTN1-205ENST00000477264 A0A0J9YXY3 114 aa11.38□□□□□ -0.59
CLSTN1-205ENST00000477264 H7C423 109 aa11.38□□□□□ -0.59
CLSTN1-205ENST00000477264 ELANEP08246 267 aa11.38□□□□□ -0.59
CLSTN1-205ENST00000477264 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
CLSTN1-205ENST00000477264 RNASE4P34096 147 aaKnown RBP11.38□□□□□ -0.59
CLSTN1-205ENST00000477264 LMO4P61968 165 aa11.38□□□□□ -0.59
CLSTN1-205ENST00000477264 C10orf105Q8TEF2 133 aa11.38□□□□□ -0.59
CLSTN1-205ENST00000477264 FAM223BA6NKX1 122 aa11.38□□□□□ -0.59
CLSTN1-205ENST00000477264 FAM223AQ8IWN6 122 aa11.38□□□□□ -0.59
CLSTN1-205ENST00000477264 MUC4Q99102 2169 aa11.37□□□□□ -0.59
CLSTN1-205ENST00000477264 DSCR9P59020 149 aa11.37□□□□□ -0.59
CLSTN1-205ENST00000477264 GNRH2O43555 120 aa11.37□□□□□ -0.59
CLSTN1-205ENST00000477264 SPRY2O43597 315 aa11.37□□□□□ -0.59
CLSTN1-205ENST00000477264 SPG11Q96JI7 2443 aa11.36□□□□□ -0.59
CLSTN1-205ENST00000477264 USP9YO00507 2555 aaPredicted RBP11.36□□□□□ -0.59
CLSTN1-205ENST00000477264 LST1O00453 97 aa11.36□□□□□ -0.59
CLSTN1-205ENST00000477264 YAE1D1Q9NRH1 226 aa11.35□□□□□ -0.59
CLSTN1-205ENST00000477264 ATP5G1P05496 136 aa11.35□□□□□ -0.59
CLSTN1-205ENST00000477264 ZNF56Q15929 161 aa11.35□□□□□ -0.59
CLSTN1-205ENST00000477264 LINC01587Q99440 93 aa11.35□□□□□ -0.59
CLSTN1-205ENST00000477264 LITAFQ99732 161 aa11.35□□□□□ -0.59
CLSTN1-205ENST00000477264 BEX4Q9NWD9 120 aaPredicted RBP11.35□□□□□ -0.59
CLSTN1-205ENST00000477264 TENM4Q6N022 2769 aa11.35□□□□□ -0.59
CLSTN1-205ENST00000477264 IGHV4-30-2A0A087WSY4 118 aa11.34□□□□□ -0.59
CLSTN1-205ENST00000477264 KLLNB2CW77 178 aa11.34□□□□□ -0.59
CLSTN1-205ENST00000477264 F5H697 171 aa11.34□□□□□ -0.59
CLSTN1-205ENST00000477264 NDUFA4O00483 81 aa11.34□□□□□ -0.59
CLSTN1-205ENST00000477264 TIMM21Q9BVV7 248 aa11.34□□□□□ -0.59
CLSTN1-205ENST00000477264 IGHV4-61A0A0C4DH41 118 aa11.34□□□□□ -0.59
CLSTN1-205ENST00000477264 MIAQ16674 131 aa11.34□□□□□ -0.59
CLSTN1-205ENST00000477264 C20orf203Q8NBC4 194 aa11.34□□□□□ -0.59
CLSTN1-205ENST00000477264 ASH1LQ9NR48 2969 aaKnown RBP11.34□□□□□ -0.59
CLSTN1-205ENST00000477264 IGHV3-30-3P0DP02 117 aa11.33□□□□□ -0.6
CLSTN1-205ENST00000477264 UBE2E1P51965 193 aa11.33□□□□□ -0.6
CLSTN1-205ENST00000477264 CENPEQ02224 2701 aa11.33□□□□□ -0.6
CLSTN1-205ENST00000477264 CELSR2Q9HCU4 2923 aa11.32□□□□□ -0.6
CLSTN1-205ENST00000477264 TIMM17BO60830 172 aa11.32□□□□□ -0.6
CLSTN1-205ENST00000477264 KRTAP10-9P60411 292 aa11.32□□□□□ -0.6
CLSTN1-205ENST00000477264 SIRPDQ9H106 197 aa11.32□□□□□ -0.6
CLSTN1-205ENST00000477264 VPREB3Q9UKI3 123 aa11.32□□□□□ -0.6
CLSTN1-205ENST00000477264 ANKRD17O75179 2603 aaKnown RBP11.32□□□□□ -0.6
CLSTN1-205ENST00000477264 DOPEY2Q9Y3R5 2298 aa11.32□□□□□ -0.6
CLSTN1-205ENST00000477264 WNK2Q9Y3S1 2297 aa11.32□□□□□ -0.6
CLSTN1-205ENST00000477264 IGLV4-3A0A075B6K6 122 aa11.31□□□□□ -0.6
CLSTN1-205ENST00000477264 TRGV11A0A075B6L2 103 aa11.31□□□□□ -0.6
CLSTN1-205ENST00000477264 G3V318 75 aa11.31□□□□□ -0.6
CLSTN1-205ENST00000477264 PYGO1Q9Y3Y4 419 aa11.31□□□□□ -0.6
CLSTN1-205ENST00000477264 C9orf85Q96MD7 179 aa11.31□□□□□ -0.6
CLSTN1-205ENST00000477264 ZNF256Q9Y2P7 627 aaPredicted RBP11.31□□□□□ -0.6
CLSTN1-205ENST00000477264 A0A087WWL8 130 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms