RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 HIST1H2BDP58876 126 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HIST1H2BCP62807 126 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 RBMY1FQ15415 496 aaKnown RBP5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HIST2H2BEQ16778 126 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 MRPL51Q4U2R6 128 aaKnown RBP5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.05□□□□□ -1.6
SHQ1-207ENST00000475558 Q6ZQT7 251 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 AMN1Q8IY45 258 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 C14orf178Q8N769 122 aaPredicted RBP5.05□□□□□ -1.6
SHQ1-207ENST00000475558 OR4C5Q8NGB2 326 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 OR11H2Q8NH07 326 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 PRSS3P2Q8NHM4 247 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 IL17DQ8TAD2 202 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HIST1H2BHQ93079 126 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 PRELID3AQ96N28 172 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HIST1H2BNQ99877 126 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 HIST1H2BMQ99879 126 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 MAP1LC3AQ9H492 121 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 MSRB1Q9NZV6 116 aa5.05□□□□□ -1.6
SHQ1-207ENST00000475558 TRBV10-1A0A0K0K1A3 114 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 C5orf52A6NGY3 159 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 CRYGDP07320 174 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 ESDP10768 282 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 AKR1D1P51857 326 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 SSTP61278 116 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 RNF185Q96GF1 192 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 WFDC10AQ9H1F0 79 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 ST20Q9HBF5 79 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 NIT2Q9NQR4 276 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 KIF25-AS1Q9Y6Z4 181 aa5.04□□□□□ -1.6
SHQ1-207ENST00000475558 PLECQ15149 4684 aaKnown RBP5.03□□□□□ -1.6
SHQ1-207ENST00000475558 TRGV2A0A075B6R0 118 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 TRGV1A0A0A0MS02 117 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 MUC21A0A0G2JKD1 596 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 TRBV6-5A0A0K0K1A5 114 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 MUC21A0A140T8X8 626 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 TRBV6-4A0A1B0GX49 114 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 D6R8Y8 96 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 TNFRSF6BO95407 300 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 SMAGPQ0VAQ4 97 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 KIAA1644Q3SXP7 199 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 TMEM97Q5BJF2 176 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 CFAP126Q5VTH2 177 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 FA2HQ7L5A8 372 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 NIT1Q86X76 327 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 LINC00612Q8N6U2 182 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 TMEM18Q96B42 140 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 KIR2DL4Q99706 377 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 SPATA25Q9BR10 227 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 PRADC1Q9BSG0 188 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 NOP10Q9NPE3 64 aaKnown RBP5.03□□□□□ -1.6
SHQ1-207ENST00000475558 TNFRSF18Q9Y5U5 241 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 X6R8D5 127 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 ALMS1Q8TCU4 4167 aa5.03□□□□□ -1.6
SHQ1-207ENST00000475558 HSBP1O75506 76 aa5.02□□□□□ -1.61
SHQ1-207ENST00000475558 IGHV3-53P01767 116 aa5.02□□□□□ -1.61
SHQ1-207ENST00000475558 LINC00315P59091 139 aa5.02□□□□□ -1.61
SHQ1-207ENST00000475558 SUMO2P61956 95 aaKnown RBP5.02□□□□□ -1.61
SHQ1-207ENST00000475558 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
SHQ1-207ENST00000475558 ORMDL2Q53FV1 153 aa5.02□□□□□ -1.61
SHQ1-207ENST00000475558 SH2D6Q7Z4S9 175 aa5.02□□□□□ -1.61
SHQ1-207ENST00000475558 Q8N8P6 123 aa5.02□□□□□ -1.61
SHQ1-207ENST00000475558 C18orf32Q8TCD1 76 aa5.02□□□□□ -1.61
SHQ1-207ENST00000475558 AP5S1Q9NUS5 200 aa5.02□□□□□ -1.61
SHQ1-207ENST00000475558 LINC01546A6NGU7 62 aa5.01□□□□□ -1.61
SHQ1-207ENST00000475558 M0QY20 66 aa5.01□□□□□ -1.61
SHQ1-207ENST00000475558 MGPP08493 103 aa5.01□□□□□ -1.61
SHQ1-207ENST00000475558 SNRPEP62304 92 aaKnown RBP5.01□□□□□ -1.61
SHQ1-207ENST00000475558 RPL36AP83881 106 aaKnown RBP5.01□□□□□ -1.61
SHQ1-207ENST00000475558 ZNF56Q15929 161 aa5.01□□□□□ -1.61
SHQ1-207ENST00000475558 DEFB135Q30KP9 77 aa5.01□□□□□ -1.61
SHQ1-207ENST00000475558 FAM74A4Q5TZK3 123 aa5.01□□□□□ -1.61
SHQ1-207ENST00000475558 UFSP1Q6NVU6 142 aa5.01□□□□□ -1.61
SHQ1-207ENST00000475558 DAZ4Q86SG3 579 aaKnown RBP5.01□□□□□ -1.61
SHQ1-207ENST00000475558 RPL36ALQ969Q0 106 aaKnown RBP5.01□□□□□ -1.61
SHQ1-207ENST00000475558 SAMD10Q9BYL1 202 aa5.01□□□□□ -1.61
SHQ1-207ENST00000475558 C11orf68Q9H3H3 251 aaKnown RBP5.01□□□□□ -1.61
SHQ1-207ENST00000475558 DAZ3Q9NR90 486 aaKnown RBP5.01□□□□□ -1.61
SHQ1-207ENST00000475558 DKK2Q9UBU2 259 aa5.01□□□□□ -1.61
SHQ1-207ENST00000475558 A0A087WWL8 130 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 TRGV4A0A0C4DH28 118 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 TRBV27A0A0K0K1C4 114 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 GAGE12BA1L429 117 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 PLAC8L1A1L4L8 177 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 I3L3M4 83 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 GAGE7O76087 117 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 NCR2O95944 276 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 ATP5G1P05496 136 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 GAGE12FP0CL80 117 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 GAGE12GP0CL81 117 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 GAGE12IP0CL82 117 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 POLR2KP53803 58 aaKnown RBP5□□□□□ -1.61
SHQ1-207ENST00000475558 DAD1P61803 113 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 LAGE3Q14657 143 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 RHOHQ15669 191 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 SUMO4Q6EEV6 95 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 NRACQ8N912 160 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 PRO0255Q9UI72 69 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 HSPB8Q9UJY1 196 aa5□□□□□ -1.61
SHQ1-207ENST00000475558 HHLA3Q9XRX5 114 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms