RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 ZANQ9Y493 2812 aa9.75□□□□□ -0.85
CCNL1-216ENST00000475298 CENPEQ02224 2701 aa9.75□□□□□ -0.85
CCNL1-216ENST00000475298 IGLV4-69A0A075B6H9 119 aa9.75□□□□□ -0.85
CCNL1-216ENST00000475298 C11orf86A6NJI1 115 aa9.75□□□□□ -0.85
CCNL1-216ENST00000475298 FAM223BA6NKX1 122 aa9.75□□□□□ -0.85
CCNL1-216ENST00000475298 ORMDL2Q53FV1 153 aa9.75□□□□□ -0.85
CCNL1-216ENST00000475298 FAM223AQ8IWN6 122 aa9.75□□□□□ -0.85
CCNL1-216ENST00000475298 AMELXQ99217 191 aa9.75□□□□□ -0.85
CCNL1-216ENST00000475298 IGKV3-7A0A075B6H7 116 aa9.74□□□□□ -0.85
CCNL1-216ENST00000475298 LOC107984640A0A0U1RRK4 108 aa9.74□□□□□ -0.85
CCNL1-216ENST00000475298 A4D1N5 150 aa9.74□□□□□ -0.85
CCNL1-216ENST00000475298 SPRY2O43597 315 aa9.74□□□□□ -0.85
CCNL1-216ENST00000475298 MRPL23Q16540 153 aaKnown RBP9.74□□□□□ -0.85
CCNL1-216ENST00000475298 GPHB5Q86YW7 130 aa9.74□□□□□ -0.85
CCNL1-216ENST00000475298 AVPP01185 164 aa9.74□□□□□ -0.85
CCNL1-216ENST00000475298 C2orf66Q6UXQ4 117 aa9.74□□□□□ -0.85
CCNL1-216ENST00000475298 POLQO75417 2590 aa9.74□□□□□ -0.85
CCNL1-216ENST00000475298 TRBV7-7A0A0K0K1E9 115 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 TRBV10-2A0A0K0K1G8 114 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 H3BMM0 161 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 M0R2P5 195 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 PF4V1P10720 104 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 C9orf47Q6ZRZ4 202 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 C14orf178Q8N769 122 aaPredicted RBP9.73□□□□□ -0.85
CCNL1-216ENST00000475298 UBE2WQ96B02 151 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 FAM208BQ5VWN6 2430 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 ACACBO00763 2458 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 ZFYVE26Q68DK2 2539 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 BAHCC1Q9P281 2608 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 RNF223E7ERA6 249 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 H7C2G1 150 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 EMP1P54849 157 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 ATXN8Q156A1 80 aa9.73□□□□□ -0.85
CCNL1-216ENST00000475298 IGHV4-4A0A075B6R2 117 aa9.72□□□□□ -0.85
CCNL1-216ENST00000475298 ZNF56Q15929 161 aa9.72□□□□□ -0.85
CCNL1-216ENST00000475298 MRPL53Q96EL3 112 aaKnown RBP9.72□□□□□ -0.85
CCNL1-216ENST00000475298 USP9YO00507 2555 aaPredicted RBP9.72□□□□□ -0.85
CCNL1-216ENST00000475298 A6NDX4 124 aa9.72□□□□□ -0.85
CCNL1-216ENST00000475298 F6UB75 175 aa9.72□□□□□ -0.85
CCNL1-216ENST00000475298 EDN2P20800 178 aa9.72□□□□□ -0.85
CCNL1-216ENST00000475298 SUMO2P61956 95 aaKnown RBP9.72□□□□□ -0.85
CCNL1-216ENST00000475298 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
CCNL1-216ENST00000475298 TSHBP01222 138 aa9.71□□□□□ -0.85
CCNL1-216ENST00000475298 IGHG2P01859 326 aa9.71□□□□□ -0.85
CCNL1-216ENST00000475298 MSMBP08118 114 aa9.71□□□□□ -0.85
CCNL1-216ENST00000475298 POM121L12Q8N7R1 296 aa9.71□□□□□ -0.85
CCNL1-216ENST00000475298 FBN2P35556 2912 aa9.71□□□□□ -0.86
CCNL1-216ENST00000475298 A0A0B4J2C4 111 aa9.71□□□□□ -0.86
CCNL1-216ENST00000475298 C9orf139Q6ZV77 190 aa9.71□□□□□ -0.86
CCNL1-216ENST00000475298 RPL39LQ96EH5 51 aaKnown RBP9.71□□□□□ -0.86
CCNL1-216ENST00000475298 SPXQ9BT56 116 aa9.71□□□□□ -0.86
CCNL1-216ENST00000475298 SMIM9A6NGZ8 99 aa9.7□□□□□ -0.86
CCNL1-216ENST00000475298 NDUFA4O00483 81 aa9.7□□□□□ -0.86
CCNL1-216ENST00000475298 SOCS3O14543 225 aa9.7□□□□□ -0.86
CCNL1-216ENST00000475298 HERVK_113P61574 105 aa9.7□□□□□ -0.86
CCNL1-216ENST00000475298 SPANXN1Q5VSR9 72 aa9.7□□□□□ -0.86
CCNL1-216ENST00000475298 FAM240AA0A1B0GVK7 77 aa9.69□□□□□ -0.86
CCNL1-216ENST00000475298 NDUFA7O95182 113 aa9.69□□□□□ -0.86
CCNL1-216ENST00000475298 CEMP1Q6PRD7 247 aaPredicted RBP9.69□□□□□ -0.86
CCNL1-216ENST00000475298 ZFAND2AQ8N6M9 145 aa9.69□□□□□ -0.86
CCNL1-216ENST00000475298 FAM236AA0A1B0GUQ0 79 aa9.68□□□□□ -0.86
CCNL1-216ENST00000475298 FAM236BA0A1B0GV22 79 aa9.68□□□□□ -0.86
CCNL1-216ENST00000475298 H7C423 109 aa9.68□□□□□ -0.86
CCNL1-216ENST00000475298 ANKRD17O75179 2603 aaKnown RBP9.68□□□□□ -0.86
CCNL1-216ENST00000475298 TRIAP1O43715 76 aa9.68□□□□□ -0.86
CCNL1-216ENST00000475298 DUX3Q96PT4 197 aa9.68□□□□□ -0.86
CCNL1-216ENST00000475298 TRGV11A0A075B6L2 103 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 C10orf99Q6UWK7 81 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 FAM19A5Q7Z5A7 132 aaPredicted RBP9.67□□□□□ -0.86
CCNL1-216ENST00000475298 MUSTN1Q8IVN3 82 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 MAPK1IP1LQ8NDC0 245 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 USMG5Q96IX5 58 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 BEX4Q9NWD9 120 aaPredicted RBP9.67□□□□□ -0.86
CCNL1-216ENST00000475298 DOPEY2Q9Y3R5 2298 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 M0R381 172 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 C9orf153Q5TBE3 101 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 C3orf22Q8N5N4 141 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 RHPN1-AS1Q9BWJ2 59 aa9.67□□□□□ -0.86
CCNL1-216ENST00000475298 KLK5Q9Y337 293 aaPredicted RBP9.67□□□□□ -0.86
CCNL1-216ENST00000475298 TRBV30A0A0K0K1B3 111 aa9.66□□□□□ -0.86
CCNL1-216ENST00000475298 J3QQQ9 107 aa9.66□□□□□ -0.86
CCNL1-216ENST00000475298 IGLV1-40P01703 118 aa9.66□□□□□ -0.86
CCNL1-216ENST00000475298 ZNF22P17026 224 aaPredicted RBP9.66□□□□□ -0.86
CCNL1-216ENST00000475298 HERVK_113P63121 156 aa9.66□□□□□ -0.86
CCNL1-216ENST00000475298 PAPPA-AS1Q5QFB9 102 aa9.66□□□□□ -0.86
CCNL1-216ENST00000475298 EPG5Q9HCE0 2579 aa9.66□□□□□ -0.86
CCNL1-216ENST00000475298 LRRK2Q5S007 2527 aa9.66□□□□□ -0.86
CCNL1-216ENST00000475298 IGIPA6NJ69 53 aa9.66□□□□□ -0.86
CCNL1-216ENST00000475298 IGHV4-59P01825 116 aa9.66□□□□□ -0.86
CCNL1-216ENST00000475298 RNASE4P34096 147 aaKnown RBP9.66□□□□□ -0.86
CCNL1-216ENST00000475298 Q1RN00 199 aa9.66□□□□□ -0.86
CCNL1-216ENST00000475298 MXRA5Q9NR99 2828 aa9.65□□□□□ -0.86
CCNL1-216ENST00000475298 WIPF1O43516 503 aa9.65□□□□□ -0.86
CCNL1-216ENST00000475298 TMEM170BQ5T4T1 132 aa9.65□□□□□ -0.86
CCNL1-216ENST00000475298 LRRC75A-AS1Q8N1F1 130 aa9.65□□□□□ -0.86
CCNL1-216ENST00000475298 TMEM101Q96IK0 257 aa9.65□□□□□ -0.86
CCNL1-216ENST00000475298 LINC00477Q96M19 166 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms