RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 COA6Q5JTJ3 125 aaKnown RBP7.36□□□□□ -1.23
COL12A1-206ENST00000474564 NIT1Q86X76 327 aa7.36□□□□□ -1.23
COL12A1-206ENST00000474564 OR10D4PQ8NGN7 298 aa7.36□□□□□ -1.23
COL12A1-206ENST00000474564 RPL36ALQ969Q0 106 aaKnown RBP7.36□□□□□ -1.23
COL12A1-206ENST00000474564 CHCHD1Q96BP2 118 aaKnown RBP7.36□□□□□ -1.23
COL12A1-206ENST00000474564 RNF185Q96GF1 192 aa7.36□□□□□ -1.23
COL12A1-206ENST00000474564 PACRGQ96M98 296 aaPredicted RBP7.36□□□□□ -1.23
COL12A1-206ENST00000474564 NIT2Q9NQR4 276 aa7.36□□□□□ -1.23
COL12A1-206ENST00000474564 TCAPO15273 167 aa7.35□□□□□ -1.23
COL12A1-206ENST00000474564 PAX4O43316 350 aa7.35□□□□□ -1.23
COL12A1-206ENST00000474564 LINC00614P0C842 121 aa7.35□□□□□ -1.23
COL12A1-206ENST00000474564 C12orf74Q32Q52 190 aa7.35□□□□□ -1.23
COL12A1-206ENST00000474564 SH2D6Q7Z4S9 175 aa7.35□□□□□ -1.23
COL12A1-206ENST00000474564 ST20Q9HBF5 79 aa7.35□□□□□ -1.23
COL12A1-206ENST00000474564 NXT2Q9NPJ8 142 aaKnown RBP7.35□□□□□ -1.23
COL12A1-206ENST00000474564 AP5S1Q9NUS5 200 aa7.35□□□□□ -1.23
COL12A1-206ENST00000474564 CELA1Q9UNI1 258 aa7.35□□□□□ -1.23
COL12A1-206ENST00000474564 KIF25-AS1Q9Y6Z4 181 aa7.35□□□□□ -1.23
COL12A1-206ENST00000474564 DEFB131BA0A096LNP1 70 aa7.34□□□□□ -1.23
COL12A1-206ENST00000474564 K7EQD1 137 aa7.34□□□□□ -1.23
COL12A1-206ENST00000474564 G0S2P27469 103 aa7.34□□□□□ -1.23
COL12A1-206ENST00000474564 NANOS2P60321 138 aaKnown RBP7.34□□□□□ -1.23
COL12A1-206ENST00000474564 FHL2Q14192 279 aa7.34□□□□□ -1.23
COL12A1-206ENST00000474564 SUMO4Q6EEV6 95 aa7.34□□□□□ -1.23
COL12A1-206ENST00000474564 POM121L12Q8N7R1 296 aa7.34□□□□□ -1.23
COL12A1-206ENST00000474564 C20orf78Q9BR46 151 aa7.34□□□□□ -1.23
COL12A1-206ENST00000474564 MGAM2Q2M2H8 2515 aa7.34□□□□□ -1.23
COL12A1-206ENST00000474564 M0QY20 66 aa7.33□□□□□ -1.24
COL12A1-206ENST00000474564 VCYO14598 125 aa7.33□□□□□ -1.24
COL12A1-206ENST00000474564 GATA1P15976 413 aaPredicted RBP7.33□□□□□ -1.24
COL12A1-206ENST00000474564 IFI27P40305 119 aaPredicted RBP7.33□□□□□ -1.24
COL12A1-206ENST00000474564 UFSP1Q6NVU6 142 aa7.33□□□□□ -1.24
COL12A1-206ENST00000474564 SLC25A29Q8N8R3 303 aa7.33□□□□□ -1.24
COL12A1-206ENST00000474564 HIST1H2BLQ99880 126 aa7.33□□□□□ -1.24
COL12A1-206ENST00000474564 EDA2RQ9HAV5 297 aa7.33□□□□□ -1.24
COL12A1-206ENST00000474564 TRBV7-3A0A075B6L6 115 aa7.32□□□□□ -1.24
COL12A1-206ENST00000474564 ESDP10768 282 aa7.32□□□□□ -1.24
COL12A1-206ENST00000474564 CRYBA4P53673 196 aa7.32□□□□□ -1.24
COL12A1-206ENST00000474564 LINC00315P59091 139 aa7.32□□□□□ -1.24
COL12A1-206ENST00000474564 KRTDAPP60985 99 aa7.32□□□□□ -1.24
COL12A1-206ENST00000474564 SUMO2P61956 95 aaKnown RBP7.32□□□□□ -1.24
COL12A1-206ENST00000474564 MRPL23Q16540 153 aaKnown RBP7.32□□□□□ -1.24
COL12A1-206ENST00000474564 TMEM97Q5BJF2 176 aa7.32□□□□□ -1.24
COL12A1-206ENST00000474564 Q6ZTC4 211 aa7.32□□□□□ -1.24
COL12A1-206ENST00000474564 FAM19A2Q8N3H0 131 aa7.32□□□□□ -1.24
COL12A1-206ENST00000474564 KIR2DL4Q99706 377 aa7.32□□□□□ -1.24
COL12A1-206ENST00000474564 KLK5Q9Y337 293 aaPredicted RBP7.32□□□□□ -1.24
COL12A1-206ENST00000474564 PKD1L1Q8TDX9 2849 aa7.32□□□□□ -1.24
COL12A1-206ENST00000474564 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 NACAE9PAV3 2078 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 TRAV26-1A0A087WT03 109 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 TRBV6-5A0A0K0K1A5 114 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 H3BNG1 76 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 NUPR1O60356 82 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 SCGB1D1O95968 90 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 GYPEP15421 78 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 FCER1GP30273 86 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 PMCHL1Q16048 86 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 DAZ4Q86SG3 579 aaKnown RBP7.31□□□□□ -1.24
COL12A1-206ENST00000474564 Q8N8P6 123 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 ZNRF2Q8NHG8 242 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 RPL39LQ96EH5 51 aaKnown RBP7.31□□□□□ -1.24
COL12A1-206ENST00000474564 SMIM2Q9BVW6 85 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 DAZ3Q9NR90 486 aaKnown RBP7.31□□□□□ -1.24
COL12A1-206ENST00000474564 HSPB8Q9UJY1 196 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 ICOSQ9Y6W8 199 aa7.31□□□□□ -1.24
COL12A1-206ENST00000474564 C20orf202A1L168 122 aa7.3□□□□□ -1.24
COL12A1-206ENST00000474564 I3L3M4 83 aa7.3□□□□□ -1.24
COL12A1-206ENST00000474564 K7EMI3 77 aa7.3□□□□□ -1.24
COL12A1-206ENST00000474564 LEPROTL1O95214 131 aa7.3□□□□□ -1.24
COL12A1-206ENST00000474564 HBDP02042 147 aa7.3□□□□□ -1.24
COL12A1-206ENST00000474564 SMIM6P0DI80 62 aa7.3□□□□□ -1.24
COL12A1-206ENST00000474564 BTF3P20290 206 aaKnown RBP7.3□□□□□ -1.24
COL12A1-206ENST00000474564 SMAGPQ0VAQ4 97 aa7.3□□□□□ -1.24
COL12A1-206ENST00000474564 C15orf53Q8NAA6 179 aa7.3□□□□□ -1.24
COL12A1-206ENST00000474564 PHLDA1Q8WV24 401 aaPredicted RBP7.3□□□□□ -1.24
COL12A1-206ENST00000474564 IGHV1-24A0A0C4DH33 117 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 A0A0J9YY99 117 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 GAGE12JA6NER3 117 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 NUPR2A6NF83 97 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 SDHAF1A6NFY7 115 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 H0Y8G0 127 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 NUDT3O95989 172 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 RPL32P62910 135 aaKnown RBP7.29□□□□□ -1.24
COL12A1-206ENST00000474564 GAGE1Q13065 139 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 GAGE4Q13068 117 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 GAGE5Q13069 117 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 COTL1Q14019 142 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 LAGE3Q14657 143 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 GAGE13Q4V321 117 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 ORMDL2Q53FV1 153 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 Q6ZSN1 163 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 NRACQ8N912 160 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 NEXN-AS1Q8NBZ9 246 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 ATP6V0E2Q8NHE4 81 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 MAP1LC3CQ9BXW4 147 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 ANK2Q01484 3957 aa7.29□□□□□ -1.24
COL12A1-206ENST00000474564 LINC01549A6NIU2 74 aa7.28□□□□□ -1.24
COL12A1-206ENST00000474564 GAS8-AS1O95177 125 aa7.28□□□□□ -1.24
COL12A1-206ENST00000474564 TCTAP57738 103 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms