RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 DYNLRB2Q8TF09 96 aa8.42□□□□□ -1.06
HPS1-208ENST00000467246 SCGB3A1Q96QR1 104 aa8.42□□□□□ -1.06
HPS1-208ENST00000467246 ANK3Q12955 4377 aaKnown RBP8.42□□□□□ -1.06
HPS1-208ENST00000467246 H3BRM9 83 aa8.42□□□□□ -1.06
HPS1-208ENST00000467246 PPP1R17O96001 155 aa8.42□□□□□ -1.06
HPS1-208ENST00000467246 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
HPS1-208ENST00000467246 DEFB114Q30KQ6 69 aa8.42□□□□□ -1.06
HPS1-208ENST00000467246 SFTA2Q6UW10 78 aa8.42□□□□□ -1.06
HPS1-208ENST00000467246 GTSCR1Q86UQ5 136 aa8.42□□□□□ -1.06
HPS1-208ENST00000467246 RAX2Q96IS3 184 aa8.42□□□□□ -1.06
HPS1-208ENST00000467246 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
HPS1-208ENST00000467246 A0A087WX48 190 aa8.41□□□□□ -1.06
HPS1-208ENST00000467246 A6NDN8 102 aa8.41□□□□□ -1.06
HPS1-208ENST00000467246 CRYGDP07320 174 aa8.41□□□□□ -1.06
HPS1-208ENST00000467246 CD300EQ496F6 205 aaPredicted RBP8.41□□□□□ -1.06
HPS1-208ENST00000467246 ZC2HC1BQ5TFG8 222 aa8.41□□□□□ -1.06
HPS1-208ENST00000467246 SAMD5Q5TGI4 173 aa8.41□□□□□ -1.06
HPS1-208ENST00000467246 C2orf66Q6UXQ4 117 aa8.41□□□□□ -1.06
HPS1-208ENST00000467246 CD28P10747 220 aa8.41□□□□□ -1.06
HPS1-208ENST00000467246 ZNF876PQ49A33 203 aa8.41□□□□□ -1.06
HPS1-208ENST00000467246 SYT8Q8NBV8 401 aa8.41□□□□□ -1.06
HPS1-208ENST00000467246 MAP6D1Q9H9H5 199 aa8.41□□□□□ -1.06
HPS1-208ENST00000467246 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
HPS1-208ENST00000467246 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
HPS1-208ENST00000467246 H3BMG7 143 aa8.4□□□□□ -1.06
HPS1-208ENST00000467246 NHP2Q9NX24 153 aaKnown RBP8.4□□□□□ -1.06
HPS1-208ENST00000467246 TRAV2A0A0B4J234 112 aa8.39□□□□□ -1.07
HPS1-208ENST00000467246 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
HPS1-208ENST00000467246 ZNF56Q15929 161 aa8.39□□□□□ -1.07
HPS1-208ENST00000467246 A8MTW9 85 aa8.39□□□□□ -1.07
HPS1-208ENST00000467246 M0QY20 66 aa8.39□□□□□ -1.07
HPS1-208ENST00000467246 FABP2P12104 132 aa8.39□□□□□ -1.07
HPS1-208ENST00000467246 MORN3Q6PF18 240 aaPredicted RBP8.39□□□□□ -1.07
HPS1-208ENST00000467246 NEXN-AS1Q8NBZ9 246 aa8.39□□□□□ -1.07
HPS1-208ENST00000467246 ZNF256Q9Y2P7 627 aaPredicted RBP8.39□□□□□ -1.07
HPS1-208ENST00000467246 TRGV11A0A075B6L2 103 aa8.39□□□□□ -1.07
HPS1-208ENST00000467246 CITED2Q99967 270 aaPredicted RBP8.39□□□□□ -1.07
HPS1-208ENST00000467246 TRAV12-1A0A0B4J245 112 aa8.38□□□□□ -1.07
HPS1-208ENST00000467246 H7C1H1 209 aa8.38□□□□□ -1.07
HPS1-208ENST00000467246 CCL24O00175 119 aa8.38□□□□□ -1.07
HPS1-208ENST00000467246 VCYO14598 125 aa8.38□□□□□ -1.07
HPS1-208ENST00000467246 RPL32P62910 135 aaKnown RBP8.38□□□□□ -1.07
HPS1-208ENST00000467246 HSD52Q0P140 79 aa8.38□□□□□ -1.07
HPS1-208ENST00000467246 ZFP2Q6ZN57 461 aa8.38□□□□□ -1.07
HPS1-208ENST00000467246 BAALCQ8WXS3 180 aa8.38□□□□□ -1.07
HPS1-208ENST00000467246 F8VRH5 84 aa8.38□□□□□ -1.07
HPS1-208ENST00000467246 FHL3Q13643 280 aa8.38□□□□□ -1.07
HPS1-208ENST00000467246 LINC01006Q8NI28 216 aa8.38□□□□□ -1.07
HPS1-208ENST00000467246 SIVA1O15304 175 aa8.37□□□□□ -1.07
HPS1-208ENST00000467246 RPL39P62891 51 aaKnown RBP8.37□□□□□ -1.07
HPS1-208ENST00000467246 SIGMAR1Q99720 223 aa8.37□□□□□ -1.07
HPS1-208ENST00000467246 TP53TG1Q9Y2A0 90 aa8.37□□□□□ -1.07
HPS1-208ENST00000467246 TRBV6-5A0A0K0K1A5 114 aa8.37□□□□□ -1.07
HPS1-208ENST00000467246 GAGE12HA6NDE8 117 aa8.37□□□□□ -1.07
HPS1-208ENST00000467246 PLNP26678 52 aa8.37□□□□□ -1.07
HPS1-208ENST00000467246 KIR2DL4Q99706 377 aa8.37□□□□□ -1.07
HPS1-208ENST00000467246 CYSLTR1Q9Y271 337 aa8.37□□□□□ -1.07
HPS1-208ENST00000467246 TRAV26-1A0A087WT03 109 aa8.36□□□□□ -1.07
HPS1-208ENST00000467246 IGHV3-73A0A0B4J1V6 119 aa8.36□□□□□ -1.07
HPS1-208ENST00000467246 TRBV27A0A0K0K1C4 114 aa8.36□□□□□ -1.07
HPS1-208ENST00000467246 PRSS29PA6NIE9 313 aa8.36□□□□□ -1.07
HPS1-208ENST00000467246 TSHBP01222 138 aa8.36□□□□□ -1.07
HPS1-208ENST00000467246 SPAG8Q99932 426 aaPredicted RBP8.36□□□□□ -1.07
HPS1-208ENST00000467246 JMJD1CQ15652 2540 aa8.36□□□□□ -1.07
HPS1-208ENST00000467246 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
HPS1-208ENST00000467246 ODF3L2Q3SX64 289 aa8.36□□□□□ -1.07
HPS1-208ENST00000467246 SMR3AQ99954 134 aa8.36□□□□□ -1.07
HPS1-208ENST00000467246 RNASE1P07998 156 aaKnown RBP8.35□□□□□ -1.07
HPS1-208ENST00000467246 PROK1P58294 105 aa8.35□□□□□ -1.07
HPS1-208ENST00000467246 MAPKAPK5-AS1Q8N8E1 139 aa8.35□□□□□ -1.07
HPS1-208ENST00000467246 IGIPA6NJ69 53 aa8.35□□□□□ -1.07
HPS1-208ENST00000467246 SETXQ7Z333 2677 aaKnown RBP8.35□□□□□ -1.07
HPS1-208ENST00000467246 TRPT1Q86TN4 253 aaKnown RBP8.34□□□□□ -1.07
HPS1-208ENST00000467246 LINC01587Q99440 93 aa8.34□□□□□ -1.07
HPS1-208ENST00000467246 TRBV25-1A0A075B6N4 114 aa8.34□□□□□ -1.07
HPS1-208ENST00000467246 P0DMU3 169 aa8.34□□□□□ -1.07
HPS1-208ENST00000467246 FAM231AP0DMU4 169 aa8.34□□□□□ -1.07
HPS1-208ENST00000467246 FAM231CP0DMU5 169 aa8.34□□□□□ -1.07
HPS1-208ENST00000467246 HIVEP2P31629 2446 aa8.34□□□□□ -1.07
HPS1-208ENST00000467246 NOTCH3Q9UM47 2321 aa8.34□□□□□ -1.07
HPS1-208ENST00000467246 C16orf95Q9H693 158 aa8.33□□□□□ -1.08
HPS1-208ENST00000467246 XCL2Q9UBD3 114 aa8.33□□□□□ -1.08
HPS1-208ENST00000467246 EMP1P54849 157 aa8.33□□□□□ -1.08
HPS1-208ENST00000467246 CKS1BP61024 79 aa8.33□□□□□ -1.08
HPS1-208ENST00000467246 CHAC1Q9BUX1 264 aa8.33□□□□□ -1.08
HPS1-208ENST00000467246 Q9UF83 564 aa8.33□□□□□ -1.08
HPS1-208ENST00000467246 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
HPS1-208ENST00000467246 M0R2P5 195 aa8.32□□□□□ -1.08
HPS1-208ENST00000467246 CRYBA4P53673 196 aa8.32□□□□□ -1.08
HPS1-208ENST00000467246 C11orf72Q8NBR9 251 aa8.32□□□□□ -1.08
HPS1-208ENST00000467246 OR5A1Q8NGJ0 315 aa8.32□□□□□ -1.08
HPS1-208ENST00000467246 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
HPS1-208ENST00000467246 INSP01308 110 aa8.32□□□□□ -1.08
HPS1-208ENST00000467246 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
HPS1-208ENST00000467246 Q6ZSN1 163 aa8.32□□□□□ -1.08
HPS1-208ENST00000467246 OPRPNQ99935 248 aaPredicted RBP8.32□□□□□ -1.08
HPS1-208ENST00000467246 HIGD1BQ9P298 99 aa8.32□□□□□ -1.08
HPS1-208ENST00000467246 IGLV4-69A0A075B6H9 119 aa8.31□□□□□ -1.08
HPS1-208ENST00000467246 HILS1P60008 231 aa8.31□□□□□ -1.08
HPS1-208ENST00000467246 STHQ8IWL8 128 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms