RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 PRADC1Q9BSG0 188 aa8.61□□□□□ -1.03
VPS16-206ENST00000466415 NXT2Q9NPJ8 142 aaKnown RBP8.61□□□□□ -1.03
VPS16-206ENST00000466415 TRBV10-1A0A0K0K1A3 114 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 HSBP1O75506 76 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 P0DMU3 169 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 FAM231AP0DMU4 169 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 FAM231CP0DMU5 169 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 HTN3P15516 51 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 S100A2P29034 98 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 IFI27P40305 119 aaPredicted RBP8.6□□□□□ -1.03
VPS16-206ENST00000466415 SNRPEP62304 92 aaKnown RBP8.6□□□□□ -1.03
VPS16-206ENST00000466415 COA6Q5JTJ3 125 aaKnown RBP8.6□□□□□ -1.03
VPS16-206ENST00000466415 Q6ZSN1 163 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 NIT1Q86X76 327 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 CHCHD1Q96BP2 118 aaKnown RBP8.6□□□□□ -1.03
VPS16-206ENST00000466415 DNAJC30Q96LL9 226 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 SMIM2Q9BVW6 85 aa8.6□□□□□ -1.03
VPS16-206ENST00000466415 TRBV6-5A0A0K0K1A5 114 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 TRBV6-4A0A1B0GX49 114 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 SDHAF1A6NFY7 115 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 LINC00614P0C842 121 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 RPL36AP83881 106 aaKnown RBP8.59□□□□□ -1.03
VPS16-206ENST00000466415 FHL2Q14192 279 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 PDZD11Q5EBL8 140 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 Q8N8P6 123 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 SLC25A29Q8N8R3 303 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 NEXN-AS1Q8NBZ9 246 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 C11orf45Q8TAV5 145 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 RPL36ALQ969Q0 106 aaKnown RBP8.59□□□□□ -1.03
VPS16-206ENST00000466415 AP5S1Q9NUS5 200 aa8.59□□□□□ -1.03
VPS16-206ENST00000466415 C5orf52A6NGY3 159 aa8.58□□□□□ -1.04
VPS16-206ENST00000466415 PRSS47A8MTI9 375 aa8.58□□□□□ -1.04
VPS16-206ENST00000466415 F5H768 121 aa8.58□□□□□ -1.04
VPS16-206ENST00000466415 NHLRC4P0CG21 123 aaPredicted RBP8.58□□□□□ -1.04
VPS16-206ENST00000466415 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
VPS16-206ENST00000466415 C12orf74Q32Q52 190 aa8.58□□□□□ -1.04
VPS16-206ENST00000466415 TMEM70Q9BUB7 260 aa8.58□□□□□ -1.04
VPS16-206ENST00000466415 PRO0255Q9UI72 69 aa8.58□□□□□ -1.04
VPS16-206ENST00000466415 HHLA3Q9XRX5 114 aa8.58□□□□□ -1.04
VPS16-206ENST00000466415 GAGE12JA6NER3 117 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 VCYO14598 125 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 HOXA5P20719 270 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 FCER1GP30273 86 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 GAGE1Q13065 139 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 GAGE4Q13068 117 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 GAGE5Q13069 117 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 GAGE13Q4V321 117 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 ZNRF2Q8NHG8 242 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 KIR2DL4Q99706 377 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 MGAM2Q2M2H8 2515 aa8.57□□□□□ -1.04
VPS16-206ENST00000466415 I3L3M4 83 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 TCAPO15273 167 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 PAX4O43316 350 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 ESDP10768 282 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 AMTP48728 403 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 CRYBA4P53673 196 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 LINC00310P59036 64 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 NANOS2P60321 138 aaKnown RBP8.56□□□□□ -1.04
VPS16-206ENST00000466415 Q6ZTC4 211 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 NEGR1Q7Z3B1 354 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 HIST3H2BBQ8N257 126 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 TMEM18Q96B42 140 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
VPS16-206ENST00000466415 IGLV2-18A0A075B6J9 118 aa8.55□□□□□ -1.04
VPS16-206ENST00000466415 TRBV7-3A0A075B6L6 115 aa8.55□□□□□ -1.04
VPS16-206ENST00000466415 TRBV27A0A0K0K1C4 114 aa8.55□□□□□ -1.04
VPS16-206ENST00000466415 K7EMI3 77 aa8.55□□□□□ -1.04
VPS16-206ENST00000466415 GYPEP15421 78 aa8.55□□□□□ -1.04
VPS16-206ENST00000466415 POLR2KP53803 58 aaKnown RBP8.55□□□□□ -1.04
VPS16-206ENST00000466415 LAGE3Q14657 143 aa8.55□□□□□ -1.04
VPS16-206ENST00000466415 ORMDL2Q53FV1 153 aa8.55□□□□□ -1.04
VPS16-206ENST00000466415 PHLDA1Q8WV24 401 aaPredicted RBP8.55□□□□□ -1.04
VPS16-206ENST00000466415 NACAE9PAV3 2078 aa8.55□□□□□ -1.04
VPS16-206ENST00000466415 TRAV26-1A0A087WT03 109 aa8.54□□□□□ -1.04
VPS16-206ENST00000466415 IGHV1-24A0A0C4DH33 117 aa8.54□□□□□ -1.04
VPS16-206ENST00000466415 A0A0J9YY99 117 aa8.54□□□□□ -1.04
VPS16-206ENST00000466415 LOC100131303A0A0U1RQF7 123 aa8.54□□□□□ -1.04
VPS16-206ENST00000466415 NUPR1O60356 82 aa8.54□□□□□ -1.04
VPS16-206ENST00000466415 NUDT3O95989 172 aa8.54□□□□□ -1.04
VPS16-206ENST00000466415 COTL1Q14019 142 aa8.54□□□□□ -1.04
VPS16-206ENST00000466415 PMCHL1Q16048 86 aa8.54□□□□□ -1.04
VPS16-206ENST00000466415 DAZ4Q86SG3 579 aaKnown RBP8.54□□□□□ -1.04
VPS16-206ENST00000466415 FAM19A2Q8N3H0 131 aa8.54□□□□□ -1.04
VPS16-206ENST00000466415 DAZ3Q9NR90 486 aaKnown RBP8.54□□□□□ -1.04
VPS16-206ENST00000466415 NOTCH1P46531 2555 aa8.53□□□□□ -1.04
VPS16-206ENST00000466415 IGHV3-38A0A0C4DH36 116 aa8.53□□□□□ -1.04
VPS16-206ENST00000466415 HBDP02042 147 aa8.53□□□□□ -1.04
VPS16-206ENST00000466415 FABP4P15090 132 aa8.53□□□□□ -1.04
VPS16-206ENST00000466415 BTF3P20290 206 aaKnown RBP8.53□□□□□ -1.04
VPS16-206ENST00000466415 UBE2D3P61077 147 aa8.53□□□□□ -1.04
VPS16-206ENST00000466415 UBE2D2P62837 147 aa8.53□□□□□ -1.04
VPS16-206ENST00000466415 Q9UF83 564 aa8.53□□□□□ -1.04
VPS16-206ENST00000466415 DEFB131BA0A096LNP1 70 aa8.52□□□□□ -1.05
VPS16-206ENST00000466415 TRAV10A0A0B4J240 114 aa8.52□□□□□ -1.05
VPS16-206ENST00000466415 LINC01546A6NGU7 62 aa8.52□□□□□ -1.05
VPS16-206ENST00000466415 G0S2P27469 103 aa8.52□□□□□ -1.05
VPS16-206ENST00000466415 DEFB104AQ8WTQ1 72 aa8.52□□□□□ -1.05
VPS16-206ENST00000466415 TSHBP01222 138 aa8.51□□□□□ -1.05
VPS16-206ENST00000466415 HIST1H2BLQ99880 126 aa8.51□□□□□ -1.05
VPS16-206ENST00000466415 ICOSQ9Y6W8 199 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms