RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 PHOX2AO14813 284 aa6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 S100A8P05109 93 aa6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 RAB5AP20339 215 aa6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 RPS10P46783 165 aaKnown RBP6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 KIAA1644Q3SXP7 199 aa6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 CASC10Q5T4H9 136 aa6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 SLC25A29Q8N8R3 303 aa6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 MUC7Q8TAX7 377 aa6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 RPL39LQ96EH5 51 aaKnown RBP6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 VSIG2Q96IQ7 327 aa6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 DNAH17Q9UFH2 4485 aa6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 FAT2Q9NYQ8 4349 aa6.28□□□□□ -1.4
NUDCD3-204ENST00000464812 TRGV4A0A0C4DH28 118 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 A0A0J9YY99 117 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 F5H697 171 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 F5H768 121 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 M0QY20 66 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 HLA-DQA1P01909 254 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 SMIM17P0DL12 118 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 CRYBA4P53673 196 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 FABP9Q0Z7S8 132 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 XP32Q5T750 250 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 ZFAND6Q6FIF0 208 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 SMIM15Q7Z3B0 74 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 NRACQ8N912 160 aa6.27□□□□□ -1.41
NUDCD3-204ENST00000464812 TRAV26-1A0A087WT03 109 aa6.26□□□□□ -1.41
NUDCD3-204ENST00000464812 DEFB131BA0A096LNP1 70 aa6.26□□□□□ -1.41
NUDCD3-204ENST00000464812 D6R8Y8 96 aa6.26□□□□□ -1.41
NUDCD3-204ENST00000464812 K7EQD1 137 aa6.26□□□□□ -1.41
NUDCD3-204ENST00000464812 NPYP01303 97 aa6.26□□□□□ -1.41
NUDCD3-204ENST00000464812 APCSP02743 223 aa6.26□□□□□ -1.41
NUDCD3-204ENST00000464812 MT-ND6P03923 174 aa6.26□□□□□ -1.41
NUDCD3-204ENST00000464812 COX19Q49B96 90 aa6.26□□□□□ -1.41
NUDCD3-204ENST00000464812 FRZBQ92765 325 aa6.26□□□□□ -1.41
NUDCD3-204ENST00000464812 TRAPPC1Q9Y5R8 145 aa6.26□□□□□ -1.41
NUDCD3-204ENST00000464812 TRAV10A0A0B4J240 114 aa6.25□□□□□ -1.41
NUDCD3-204ENST00000464812 TRBV6-4A0A1B0GX49 114 aa6.25□□□□□ -1.41
NUDCD3-204ENST00000464812 TRGC2P03986 189 aa6.25□□□□□ -1.41
NUDCD3-204ENST00000464812 NEXN-AS1Q8NBZ9 246 aa6.25□□□□□ -1.41
NUDCD3-204ENST00000464812 PHLDA1Q8WV24 401 aaPredicted RBP6.25□□□□□ -1.41
NUDCD3-204ENST00000464812 MRAP2Q96G30 205 aa6.25□□□□□ -1.41
NUDCD3-204ENST00000464812 PRO0255Q9UI72 69 aa6.25□□□□□ -1.41
NUDCD3-204ENST00000464812 HHLA3Q9XRX5 114 aa6.25□□□□□ -1.41
NUDCD3-204ENST00000464812 PAX4O43316 350 aa6.24□□□□□ -1.41
NUDCD3-204ENST00000464812 CIDEAO60543 219 aa6.24□□□□□ -1.41
NUDCD3-204ENST00000464812 SRIP30626 198 aa6.24□□□□□ -1.41
NUDCD3-204ENST00000464812 CKS2P33552 79 aa6.24□□□□□ -1.41
NUDCD3-204ENST00000464812 RHOHQ15669 191 aa6.24□□□□□ -1.41
NUDCD3-204ENST00000464812 NEGR1Q7Z3B1 354 aa6.24□□□□□ -1.41
NUDCD3-204ENST00000464812 ORMDL3Q8N138 153 aa6.24□□□□□ -1.41
NUDCD3-204ENST00000464812 PRELID3AQ96N28 172 aa6.24□□□□□ -1.41
NUDCD3-204ENST00000464812 ALKBH7Q9BT30 221 aaPredicted RBP6.24□□□□□ -1.41
NUDCD3-204ENST00000464812 TRBV6-5A0A0K0K1A5 114 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 C3orf84H3BNL1 204 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 TNFRSF6BO95407 300 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 GYPEP15421 78 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 GAGE1Q13065 139 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 GAGE4Q13068 117 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 GAGE5Q13069 117 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 IQCJQ1A5X6 159 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 OR10J3Q5JRS4 329 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 DEFB104AQ8WTQ1 72 aa6.23□□□□□ -1.41
NUDCD3-204ENST00000464812 A0A096LPF7 62 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 IGHV3-38A0A0C4DH36 116 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 TRBV10-1A0A0K0K1A3 114 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 H7C1H1 209 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 UBE2D3P61077 147 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 UBE2D2P62837 147 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 ZNRF2Q8NHG8 242 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 C18orf32Q8TCD1 76 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 URB1-AS1Q96HZ7 61 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 PRADC1Q9BSG0 188 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 NIT2Q9NQR4 276 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 BIRC6Q9NR09 4857 aa6.22□□□□□ -1.41
NUDCD3-204ENST00000464812 DNAH11Q96DT5 4516 aa6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 IGLV2-18A0A075B6J9 118 aa6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 TRBV7-3A0A075B6L6 115 aa6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 SDHAF1A6NFY7 115 aa6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 IGLL5B9A064 214 aa6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 PPBPP02775 128 aa6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 POLR2KP53803 58 aaKnown RBP6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 CEMP1Q6PRD7 247 aaPredicted RBP6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 TMEM70Q9BUB7 260 aa6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 SMIM2Q9BVW6 85 aa6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 ICOSQ9Y6W8 199 aa6.21□□□□□ -1.42
NUDCD3-204ENST00000464812 LOC389332A0A1B0GUA5 103 aa6.2□□□□□ -1.42
NUDCD3-204ENST00000464812 H3BNG1 76 aa6.2□□□□□ -1.42
NUDCD3-204ENST00000464812 HIST1H2BKO60814 126 aa6.2□□□□□ -1.42
NUDCD3-204ENST00000464812 NUDT3O95989 172 aa6.2□□□□□ -1.42
NUDCD3-204ENST00000464812 HIST1H2BJP06899 126 aa6.2□□□□□ -1.42
NUDCD3-204ENST00000464812 HIST1H2BOP23527 126 aa6.2□□□□□ -1.42
NUDCD3-204ENST00000464812 HIST1H2BBP33778 126 aa6.2□□□□□ -1.42
NUDCD3-204ENST00000464812 HIST1H2BDP58876 126 aa6.2□□□□□ -1.42
NUDCD3-204ENST00000464812 LINC00310P59036 64 aa6.2□□□□□ -1.42
NUDCD3-204ENST00000464812 HIST1H2BCP62807 126 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms