RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MDFICQ9P1T7 246 aa6.94□□□□□ -1.3
HPS4-208ENST00000464362 ZFP2Q6ZN57 461 aa6.94□□□□□ -1.3
HPS4-208ENST00000464362 TMEM141Q96I45 108 aa6.94□□□□□ -1.3
HPS4-208ENST00000464362 DSPP15924 2871 aaKnown RBP6.94□□□□□ -1.3
HPS4-208ENST00000464362 A4D1N5 150 aa6.94□□□□□ -1.3
HPS4-208ENST00000464362 SLC25A20O43772 301 aa6.94□□□□□ -1.3
HPS4-208ENST00000464362 CRPP02741 224 aa6.94□□□□□ -1.3
HPS4-208ENST00000464362 CEMP1Q6PRD7 247 aaPredicted RBP6.94□□□□□ -1.3
HPS4-208ENST00000464362 NXPH4O95158 308 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 RASL10AQ92737 203 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 Q96MF0 132 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 SIRPDQ9H106 197 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 CRYGBP07316 175 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 PPDPFLQ8WWR9 84 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 IGF2-ASQ6U949 168 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 FOXI2Q6ZQN5 318 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 MRPL53Q96EL3 112 aaKnown RBP6.93□□□□□ -1.3
HPS4-208ENST00000464362 URB1-AS1Q96HZ7 61 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 EDA2RQ9HAV5 297 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 Q8N976 141 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 SMAD5-AS1Q9Y6J3 95 aa6.93□□□□□ -1.3
HPS4-208ENST00000464362 DSCR9P59020 149 aa6.92□□□□□ -1.3
HPS4-208ENST00000464362 C19orf84I3L1E1 186 aa6.92□□□□□ -1.3
HPS4-208ENST00000464362 IGLC6P0CF74 106 aa6.92□□□□□ -1.3
HPS4-208ENST00000464362 CITED2Q99967 270 aaPredicted RBP6.92□□□□□ -1.3
HPS4-208ENST00000464362 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
HPS4-208ENST00000464362 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
HPS4-208ENST00000464362 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
HPS4-208ENST00000464362 RBMY1A1P0DJD3 496 aaKnown RBP6.92□□□□□ -1.3
HPS4-208ENST00000464362 RBMY1CP0DJD4 496 aa6.92□□□□□ -1.3
HPS4-208ENST00000464362 LMO4P61968 165 aa6.92□□□□□ -1.3
HPS4-208ENST00000464362 GAGE2AQ6NT46 116 aa6.92□□□□□ -1.3
HPS4-208ENST00000464362 C9orf47Q6ZRZ4 202 aa6.92□□□□□ -1.3
HPS4-208ENST00000464362 LENEPQ9Y5L5 61 aa6.92□□□□□ -1.3
HPS4-208ENST00000464362 LINC01619G3V211 115 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 P0DMU3 169 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 FAM231AP0DMU4 169 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 FAM231CP0DMU5 169 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 C10orf99Q6UWK7 81 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 MAPKAPK5-AS1Q8N8E1 139 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 U3KQE9 123 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 TAL2Q16559 108 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 C1QTNF4Q9BXJ3 329 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 CFC1BP0CG36 223 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 CFC1P0CG37 223 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 RNF183Q96D59 192 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 C11orf21Q9P2W6 132 aa6.91□□□□□ -1.3
HPS4-208ENST00000464362 IGHV4OR15-8A0A075B7B6 117 aa6.9□□□□□ -1.3
HPS4-208ENST00000464362 A0A087WW49 117 aa6.9□□□□□ -1.3
HPS4-208ENST00000464362 MUSTN1Q8IVN3 82 aa6.9□□□□□ -1.3
HPS4-208ENST00000464362 FLNBO75369 2602 aaKnown RBP6.9□□□□□ -1.3
HPS4-208ENST00000464362 H3BMM0 161 aa6.9□□□□□ -1.3
HPS4-208ENST00000464362 RHODO00212 210 aa6.9□□□□□ -1.3
HPS4-208ENST00000464362 HIST1H4AP62805 103 aaKnown RBP6.9□□□□□ -1.3
HPS4-208ENST00000464362 TMEM86BQ8N661 226 aa6.9□□□□□ -1.3
HPS4-208ENST00000464362 UBE2WQ96B02 151 aa6.9□□□□□ -1.3
HPS4-208ENST00000464362 C20orf173Q96LM9 149 aa6.9□□□□□ -1.3
HPS4-208ENST00000464362 C1orf43Q9BWL3 253 aa6.9□□□□□ -1.3
HPS4-208ENST00000464362 ODF3BA8MYP8 253 aa6.9□□□□□ -1.31
HPS4-208ENST00000464362 Q9H8V8 135 aa6.9□□□□□ -1.31
HPS4-208ENST00000464362 LGALS1P09382 135 aaKnown RBP6.9□□□□□ -1.31
HPS4-208ENST00000464362 CARD19Q96LW7 228 aa6.9□□□□□ -1.31
HPS4-208ENST00000464362 NOP10Q9NPE3 64 aaKnown RBP6.9□□□□□ -1.31
HPS4-208ENST00000464362 USP24Q9UPU5 2620 aa6.89□□□□□ -1.31
HPS4-208ENST00000464362 ANKRD17O75179 2603 aaKnown RBP6.89□□□□□ -1.31
HPS4-208ENST00000464362 LEPROTO15243 131 aa6.89□□□□□ -1.31
HPS4-208ENST00000464362 S100A7L2Q5SY68 101 aa6.89□□□□□ -1.31
HPS4-208ENST00000464362 C2orf91Q6ZV80 131 aa6.89□□□□□ -1.31
HPS4-208ENST00000464362 LY6LH3BQJ8 138 aa6.89□□□□□ -1.31
HPS4-208ENST00000464362 C10orf105Q8TEF2 133 aa6.89□□□□□ -1.31
HPS4-208ENST00000464362 RNF185Q96GF1 192 aa6.89□□□□□ -1.31
HPS4-208ENST00000464362 PTPRBP23467 1997 aa6.88□□□□□ -1.31
HPS4-208ENST00000464362 TRBV6-1A0A0K0K1D8 114 aa6.88□□□□□ -1.31
HPS4-208ENST00000464362 PRM2P04554 102 aa6.88□□□□□ -1.31
HPS4-208ENST00000464362 C3orf56Q8N813 242 aa6.88□□□□□ -1.31
HPS4-208ENST00000464362 ZFAND3Q9H8U3 227 aa6.88□□□□□ -1.31
HPS4-208ENST00000464362 ESM1Q9NQ30 184 aa6.88□□□□□ -1.31
HPS4-208ENST00000464362 VPREB3Q9UKI3 123 aa6.88□□□□□ -1.31
HPS4-208ENST00000464362 GATA3P23771 443 aa6.88□□□□□ -1.31
HPS4-208ENST00000464362 C5orf38Q86SI9 138 aa6.88□□□□□ -1.31
HPS4-208ENST00000464362 ADAMTS20P59510 1910 aa6.88□□□□□ -1.31
HPS4-208ENST00000464362 E9PLD3 99 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 IGHG2P01859 326 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 ELANEP08246 267 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 PRR9Q5T870 116 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 Q6ZS46 218 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 TMEM61Q8N0U2 210 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 TNRC6BQ9UPQ9 1833 aaKnown RBP6.87□□□□□ -1.31
HPS4-208ENST00000464362 FRYQ5TBA9 3013 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 FBXL19-AS1Q494R0 122 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 HIGD1BQ9P298 99 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 ASPMQ8IZT6 3477 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 MRPL23Q16540 153 aaKnown RBP6.87□□□□□ -1.31
HPS4-208ENST00000464362 TMEM243Q9BU79 118 aa6.87□□□□□ -1.31
HPS4-208ENST00000464362 C15orf53Q8NAA6 179 aa6.86□□□□□ -1.31
HPS4-208ENST00000464362 ZFAND2AQ8N6M9 145 aa6.86□□□□□ -1.31
HPS4-208ENST00000464362 LAMTOR3Q9UHA4 124 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms