RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 RPL32P62910 135 aaKnown RBP9.28□□□□□ -0.92
VAPB-203ENST00000463370 SCGB3A1Q96QR1 104 aa9.28□□□□□ -0.92
VAPB-203ENST00000463370 ZMAT4Q9H898 229 aa9.28□□□□□ -0.92
VAPB-203ENST00000463370 MRPL35Q9NZE8 188 aaKnown RBP9.28□□□□□ -0.92
VAPB-203ENST00000463370 HHLA3Q9XRX5 114 aa9.28□□□□□ -0.92
VAPB-203ENST00000463370 ATRQ13535 2644 aa9.28□□□□□ -0.92
VAPB-203ENST00000463370 TRBV27A0A0K0K1C4 114 aa9.28□□□□□ -0.92
VAPB-203ENST00000463370 RPL39P62891 51 aaKnown RBP9.28□□□□□ -0.92
VAPB-203ENST00000463370 CFAP126Q5VTH2 177 aa9.28□□□□□ -0.92
VAPB-203ENST00000463370 ZFP2Q6ZN57 461 aa9.28□□□□□ -0.92
VAPB-203ENST00000463370 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.28□□□□□ -0.92
VAPB-203ENST00000463370 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.27□□□□□ -0.93
VAPB-203ENST00000463370 K7EMI3 77 aa9.27□□□□□ -0.93
VAPB-203ENST00000463370 VCYO14598 125 aa9.27□□□□□ -0.93
VAPB-203ENST00000463370 SLC25A34Q6PIV7 304 aa9.27□□□□□ -0.93
VAPB-203ENST00000463370 MRPS16Q9Y3D3 137 aaKnown RBP9.27□□□□□ -0.93
VAPB-203ENST00000463370 NOTCH3Q9UM47 2321 aa9.26□□□□□ -0.93
VAPB-203ENST00000463370 TSHBP01222 138 aa9.26□□□□□ -0.93
VAPB-203ENST00000463370 COX8AP10176 69 aa9.26□□□□□ -0.93
VAPB-203ENST00000463370 FGF6P10767 208 aa9.26□□□□□ -0.93
VAPB-203ENST00000463370 NUTF2P61970 127 aaKnown RBP9.26□□□□□ -0.93
VAPB-203ENST00000463370 LBHQ53QV2 105 aaPredicted RBP9.26□□□□□ -0.93
VAPB-203ENST00000463370 TP53TG1Q9Y2A0 90 aa9.26□□□□□ -0.93
VAPB-203ENST00000463370 F8P00451 2351 aa9.26□□□□□ -0.93
VAPB-203ENST00000463370 A0A087WX48 190 aa9.26□□□□□ -0.93
VAPB-203ENST00000463370 IGKCP01834 107 aa9.26□□□□□ -0.93
VAPB-203ENST00000463370 HINT1P49773 126 aaPredicted RBP9.26□□□□□ -0.93
VAPB-203ENST00000463370 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
VAPB-203ENST00000463370 RNASE8Q8TDE3 154 aaKnown RBP9.26□□□□□ -0.93
VAPB-203ENST00000463370 KIR2DL4Q99706 377 aa9.26□□□□□ -0.93
VAPB-203ENST00000463370 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
VAPB-203ENST00000463370 A8MWV9 139 aa9.25□□□□□ -0.93
VAPB-203ENST00000463370 MRPL52Q86TS9 123 aaKnown RBP9.25□□□□□ -0.93
VAPB-203ENST00000463370 PCP2Q8IVA1 136 aa9.25□□□□□ -0.93
VAPB-203ENST00000463370 NEXN-AS1Q8NBZ9 246 aa9.25□□□□□ -0.93
VAPB-203ENST00000463370 IL17DQ8TAD2 202 aa9.25□□□□□ -0.93
VAPB-203ENST00000463370 BAALCQ8WXS3 180 aa9.25□□□□□ -0.93
VAPB-203ENST00000463370 FAM110AQ9BQ89 295 aa9.25□□□□□ -0.93
VAPB-203ENST00000463370 DPM2O94777 84 aa9.24□□□□□ -0.93
VAPB-203ENST00000463370 C2orf91Q6ZV80 131 aa9.24□□□□□ -0.93
VAPB-203ENST00000463370 TEP1Q99973 2627 aaKnown RBP9.24□□□□□ -0.93
VAPB-203ENST00000463370 NMUP48645 174 aa9.24□□□□□ -0.93
VAPB-203ENST00000463370 ERASQ7Z444 233 aa9.24□□□□□ -0.93
VAPB-203ENST00000463370 GTSCR1Q86UQ5 136 aa9.24□□□□□ -0.93
VAPB-203ENST00000463370 SPXQ9BT56 116 aa9.24□□□□□ -0.93
VAPB-203ENST00000463370 TTTY13Q9BZ97 58 aa9.24□□□□□ -0.93
VAPB-203ENST00000463370 IGIPA6NJ69 53 aa9.23□□□□□ -0.93
VAPB-203ENST00000463370 PIK3CD-AS1Q5SR53 167 aa9.23□□□□□ -0.93
VAPB-203ENST00000463370 CSNK1G2-AS1Q8NCQ2 148 aa9.23□□□□□ -0.93
VAPB-203ENST00000463370 PTH2Q96A98 100 aa9.23□□□□□ -0.93
VAPB-203ENST00000463370 CYSLTR1Q9Y271 337 aa9.23□□□□□ -0.93
VAPB-203ENST00000463370 CMC4P56277 68 aaPredicted RBP9.23□□□□□ -0.93
VAPB-203ENST00000463370 TRGV1A0A0A0MS02 117 aa9.22□□□□□ -0.93
VAPB-203ENST00000463370 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
VAPB-203ENST00000463370 PRSS29PA6NIE9 313 aa9.22□□□□□ -0.93
VAPB-203ENST00000463370 RIPPLY3P57055 190 aa9.22□□□□□ -0.93
VAPB-203ENST00000463370 MPV17L2Q567V2 206 aa9.22□□□□□ -0.93
VAPB-203ENST00000463370 Q6ZTI0 123 aa9.22□□□□□ -0.93
VAPB-203ENST00000463370 EDA2RQ9HAV5 297 aa9.22□□□□□ -0.93
VAPB-203ENST00000463370 RS1O15537 224 aa9.22□□□□□ -0.93
VAPB-203ENST00000463370 OPRPNQ99935 248 aaPredicted RBP9.22□□□□□ -0.93
VAPB-203ENST00000463370 CITED1Q99966 193 aa9.22□□□□□ -0.93
VAPB-203ENST00000463370 NACAE9PAV3 2078 aa9.21□□□□□ -0.93
VAPB-203ENST00000463370 PLAC8L1A1L4L8 177 aa9.21□□□□□ -0.93
VAPB-203ENST00000463370 F8VRH5 84 aa9.21□□□□□ -0.93
VAPB-203ENST00000463370 H7C1H1 209 aa9.21□□□□□ -0.93
VAPB-203ENST00000463370 I3L3M4 83 aa9.21□□□□□ -0.93
VAPB-203ENST00000463370 BOD1L2Q8IYS8 172 aa9.21□□□□□ -0.93
VAPB-203ENST00000463370 TMEM263Q8WUH6 116 aaKnown RBP9.21□□□□□ -0.93
VAPB-203ENST00000463370 ZNF479Q96JC4 524 aa9.21□□□□□ -0.93
VAPB-203ENST00000463370 CHTOPQ9Y3Y2 248 aaKnown RBP9.21□□□□□ -0.93
VAPB-203ENST00000463370 NOP10Q9NPE3 64 aaKnown RBP9.21□□□□□ -0.94
VAPB-203ENST00000463370 IGHV3-53P01767 116 aa9.2□□□□□ -0.94
VAPB-203ENST00000463370 EMP1P54849 157 aa9.2□□□□□ -0.94
VAPB-203ENST00000463370 NBEAL2Q6ZNJ1 2754 aa9.2□□□□□ -0.94
VAPB-203ENST00000463370 FBN1P35555 2871 aaKnown RBP9.2□□□□□ -0.94
VAPB-203ENST00000463370 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
VAPB-203ENST00000463370 IGHV3-38A0A0C4DH36 116 aa9.19□□□□□ -0.94
VAPB-203ENST00000463370 RHODO00212 210 aa9.19□□□□□ -0.94
VAPB-203ENST00000463370 PLNP26678 52 aa9.19□□□□□ -0.94
VAPB-203ENST00000463370 RHOHQ15669 191 aa9.19□□□□□ -0.94
VAPB-203ENST00000463370 Q6ZVH6 145 aa9.19□□□□□ -0.94
VAPB-203ENST00000463370 C20orf203Q8NBC4 194 aa9.19□□□□□ -0.94
VAPB-203ENST00000463370 IGLV4-69A0A075B6H9 119 aa9.18□□□□□ -0.94
VAPB-203ENST00000463370 COL5A1-AS1Q5SY13 56 aa9.18□□□□□ -0.94
VAPB-203ENST00000463370 OR4C5Q8NGB2 326 aa9.18□□□□□ -0.94
VAPB-203ENST00000463370 TIMM17AQ99595 171 aa9.18□□□□□ -0.94
VAPB-203ENST00000463370 BVES-AS1Q5T3Y7 98 aa9.17□□□□□ -0.94
VAPB-203ENST00000463370 PHLDA1Q8WV24 401 aaPredicted RBP9.17□□□□□ -0.94
VAPB-203ENST00000463370 CST9LQ9H4G1 147 aa9.17□□□□□ -0.94
VAPB-203ENST00000463370 G0S2P27469 103 aa9.17□□□□□ -0.94
VAPB-203ENST00000463370 CYSRT1A8MQ03 144 aa9.16□□□□□ -0.94
VAPB-203ENST00000463370 DAZ2Q13117 558 aaKnown RBP9.16□□□□□ -0.94
VAPB-203ENST00000463370 PMVKQ15126 192 aa9.16□□□□□ -0.94
VAPB-203ENST00000463370 C9orf66Q5T8R8 295 aa9.16□□□□□ -0.94
VAPB-203ENST00000463370 CEMP1Q6PRD7 247 aaPredicted RBP9.16□□□□□ -0.94
VAPB-203ENST00000463370 LURAP1LQ8IV03 231 aa9.16□□□□□ -0.94
VAPB-203ENST00000463370 MAPKAPK5-AS1Q8N8E1 139 aa9.16□□□□□ -0.94
VAPB-203ENST00000463370 FAM104AQ969W3 186 aa9.16□□□□□ -0.94
VAPB-203ENST00000463370 TMEM141Q96I45 108 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms