RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 COL5A3P25940 1745 aaPredicted RBP1.77□□□□□ -2.13
USH2A-203ENST00000463147 SCN8AQ9UQD0 1980 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 MYLKQ15746 1914 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 ZNF236Q9UL36 1845 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 SPAARA0A1B0GVQ0 90 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 A0A1W2PPM0 123 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 F8W1H4 67 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 H3BUT2 72 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 SDCBPO00560 298 aaPredicted RBP1.76□□□□□ -2.13
USH2A-203ENST00000463147 RER1O15258 196 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 NUPR1O60356 82 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 PITX3O75364 302 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 TNFP01375 233 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 MT-ND6P03923 174 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 C3orf79P0CE67 100 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 SMIM13P0DJ93 91 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 CXCL8P10145 99 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 MGST1P10620 155 aaKnown RBP1.76□□□□□ -2.13
USH2A-203ENST00000463147 HIST1H1DP16402 221 aaKnown RBP1.76□□□□□ -2.13
USH2A-203ENST00000463147 DYNLT3P51808 116 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 UBE2G1P62253 170 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 OR8B8Q15620 311 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 C7orf65Q6ZTY9 151 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.76□□□□□ -2.13
USH2A-203ENST00000463147 NUP35Q8NFH5 326 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 OR8B3Q8NGG8 313 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 OR51A4Q8NGJ6 313 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 OR5D14Q8NGL3 314 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 C18orf32Q8TCD1 76 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 ZC2HC1AQ96GY0 325 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 TMEM191AQ9H0A3 160 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 BCL2L10Q9HD36 194 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 HS3ST2Q9Y278 367 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 IER3IP1Q9Y5U9 82 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 SOX21Q9Y651 276 aaPredicted RBP1.76□□□□□ -2.13
USH2A-203ENST00000463147 ARL2-SNX15V9GYD0 113 aa1.76□□□□□ -2.13
USH2A-203ENST00000463147 A0A087WX48 190 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 PIGBOS1A0A0B4J2F0 54 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 TMEM262E9PQX1 116 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 HMGN4O00479 90 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 PIRTP0C851 137 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 COX6A1P12074 109 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 SLC25A6P12236 298 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 RPL7P18124 248 aaKnown RBP1.75□□□□□ -2.13
USH2A-203ENST00000463147 KLRD1Q13241 179 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 KRTAP13-4Q3LI77 160 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 Q56UQ5 140 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 GLYATL3Q5SZD4 288 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 C1orf140Q5VVS0 124 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 C22orf39Q6P5X5 142 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 GLIPR1L1Q6UWM5 242 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 HRCT1Q6UXD1 115 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 ZNF826PQ6ZT77 177 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 KRTAP13-1Q8IUC0 172 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 ATOH7Q8N100 152 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 ATP6V0E2Q8NHE4 81 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 SDF2Q99470 211 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 TTTY10Q9BZA0 68 aa1.75□□□□□ -2.13
USH2A-203ENST00000463147 MDC1Q14676 2089 aaKnown RBP1.75□□□□□ -2.13
USH2A-203ENST00000463147 MCM3APO60318 1980 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 CUL9Q8IWT3 2517 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 FAM24AA6NFZ4 105 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 J3KT08 172 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 K7ERJ3 54 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 CDC42EP2O14613 210 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 TIMM17BO60830 172 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 CST7O76096 145 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 GYPBP06028 91 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 IFITM1P13164 125 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 EVI2AP22794 236 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 CBLN1P23435 193 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 DEFB103AP81534 67 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 SERF2P84101 59 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 CATR1Q13166 79 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 Q6ZUT4 128 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 OR10AC1Q8NH08 325 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 TSKUQ8WUA8 353 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 LSM10Q969L4 123 aaKnown RBP1.74□□□□□ -2.13
USH2A-203ENST00000463147 RAB37Q96AX2 223 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 Q96M85 177 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 SPANXDQ9BXN6 97 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 NAA60Q9H7X0 242 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 RABAC1Q9UI14 185 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 ZFHX2Q9C0A1 2572 aaPredicted RBP1.74□□□□□ -2.13
USH2A-203ENST00000463147 ICE1Q9Y2F5 2266 aa1.74□□□□□ -2.13
USH2A-203ENST00000463147 NINQ8N4C6 2090 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 TRAV36DV7A0A075B6V5 113 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 CTXND1A0A1B0GTU2 59 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 CRYM-AS1A6NIL9 109 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 SYS1-DBNDD2H3BUS1 97 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 KLF7O75840 302 aaPredicted RBP1.73□□□□□ -2.13
USH2A-203ENST00000463147 LYZL6O75951 148 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 SNCGO76070 127 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 MT-ATP8P03928 68 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 COX8AP10176 69 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 IL9P15248 144 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 KRTAP12-1P59990 96 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 PCOTHQ58A44 107 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 PSMG4Q5JS54 123 aa1.73□□□□□ -2.13
USH2A-203ENST00000463147 MEIG1Q5JSS6 88 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms