RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 SMIM2Q9BVW6 85 aa14.04□□□□□ -0.16
HIGD1A-204ENST00000452906 TRBV6-5A0A0K0K1A5 114 aa14.03□□□□□ -0.16
HIGD1A-204ENST00000452906 LINC01546A6NGU7 62 aa14.03□□□□□ -0.16
HIGD1A-204ENST00000452906 IFITM10A6NMD0 228 aa14.03□□□□□ -0.16
HIGD1A-204ENST00000452906 LYRM9A8MSI8 78 aa14.03□□□□□ -0.16
HIGD1A-204ENST00000452906 NUPR1O60356 82 aa14.03□□□□□ -0.16
HIGD1A-204ENST00000452906 UFSP1Q6NVU6 142 aa14.03□□□□□ -0.16
HIGD1A-204ENST00000452906 SBSPONQ8IVN8 264 aa14.03□□□□□ -0.16
HIGD1A-204ENST00000452906 TRGV2A0A075B6R0 118 aa14.02□□□□□ -0.17
HIGD1A-204ENST00000452906 TCAPO15273 167 aa14.02□□□□□ -0.17
HIGD1A-204ENST00000452906 GATA1P15976 413 aaPredicted RBP14.02□□□□□ -0.17
HIGD1A-204ENST00000452906 Q6ZTI0 123 aa14.02□□□□□ -0.17
HIGD1A-204ENST00000452906 NIT2Q9NQR4 276 aa14.02□□□□□ -0.17
HIGD1A-204ENST00000452906 TEX48A0A1B0GUV7 120 aa14.01□□□□□ -0.17
HIGD1A-204ENST00000452906 M0QY20 66 aa14.01□□□□□ -0.17
HIGD1A-204ENST00000452906 IGHV3-53P01767 116 aa14.01□□□□□ -0.17
HIGD1A-204ENST00000452906 OR10D4PQ8NGN7 298 aa14.01□□□□□ -0.17
HIGD1A-204ENST00000452906 URB1-AS1Q96HZ7 61 aa14.01□□□□□ -0.17
HIGD1A-204ENST00000452906 G0S2P27469 103 aa14□□□□□ -0.17
HIGD1A-204ENST00000452906 DNAJC30Q96LL9 226 aa14□□□□□ -0.17
HIGD1A-204ENST00000452906 C18orf15Q96N68 181 aa14□□□□□ -0.17
HIGD1A-204ENST00000452906 NACAE9PAV3 2078 aa14□□□□□ -0.17
HIGD1A-204ENST00000452906 IGHV1-24A0A0C4DH33 117 aa13.99□□□□□ -0.17
HIGD1A-204ENST00000452906 VCYO14598 125 aa13.99□□□□□ -0.17
HIGD1A-204ENST00000452906 GAS8-AS1O95177 125 aa13.99□□□□□ -0.17
HIGD1A-204ENST00000452906 ORMDL2Q53FV1 153 aa13.99□□□□□ -0.17
HIGD1A-204ENST00000452906 RPL39LQ96EH5 51 aaKnown RBP13.99□□□□□ -0.17
HIGD1A-204ENST00000452906 GAGE12BA1L429 117 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 LINC01549A6NIU2 74 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 GAGE7O76087 117 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 HBDP02042 147 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 GAGE12FP0CL80 117 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 GAGE12GP0CL81 117 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 GAGE12IP0CL82 117 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 SMIM6P0DI80 62 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 LINC00612Q8N6U2 182 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 KIR2DL4Q99706 377 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 HSPB8Q9UJY1 196 aa13.98□□□□□ -0.17
HIGD1A-204ENST00000452906 IGLV2-18A0A075B6J9 118 aa13.97□□□□□ -0.17
HIGD1A-204ENST00000452906 TRBV10-1A0A0K0K1A3 114 aa13.97□□□□□ -0.17
HIGD1A-204ENST00000452906 EMP1P54849 157 aa13.97□□□□□ -0.17
HIGD1A-204ENST00000452906 LAGE3Q14657 143 aa13.97□□□□□ -0.17
HIGD1A-204ENST00000452906 FAM19A2Q8N3H0 131 aa13.97□□□□□ -0.17
HIGD1A-204ENST00000452906 MUC7Q8TAX7 377 aa13.97□□□□□ -0.17
HIGD1A-204ENST00000452906 TNFRSF18Q9Y5U5 241 aa13.97□□□□□ -0.17
HIGD1A-204ENST00000452906 HUWE1Q7Z6Z7 4374 aaKnown RBP13.97□□□□□ -0.17
HIGD1A-204ENST00000452906 RYR3Q15413 4870 aa13.96□□□□□ -0.17
HIGD1A-204ENST00000452906 IGHV4-28A0A0C4DH34 117 aa13.96□□□□□ -0.17
HIGD1A-204ENST00000452906 LEPROTL1O95214 131 aa13.96□□□□□ -0.17
HIGD1A-204ENST00000452906 TM2D3Q9BRN9 247 aa13.96□□□□□ -0.17
HIGD1A-204ENST00000452906 TMEM70Q9BUB7 260 aa13.96□□□□□ -0.17
HIGD1A-204ENST00000452906 IGHV3-73A0A0B4J1V6 119 aa13.95□□□□□ -0.18
HIGD1A-204ENST00000452906 TRBV27A0A0K0K1C4 114 aa13.95□□□□□ -0.18
HIGD1A-204ENST00000452906 SDHAF1A6NFY7 115 aa13.95□□□□□ -0.18
HIGD1A-204ENST00000452906 POLR2KP53803 58 aaKnown RBP13.95□□□□□ -0.18
HIGD1A-204ENST00000452906 Q8NAQ8 132 aa13.95□□□□□ -0.18
HIGD1A-204ENST00000452906 SPATA25Q9BR10 227 aa13.95□□□□□ -0.18
HIGD1A-204ENST00000452906 DNAH7Q8WXX0 4024 aa13.94□□□□□ -0.18
HIGD1A-204ENST00000452906 FCER1GP30273 86 aa13.94□□□□□ -0.18
HIGD1A-204ENST00000452906 TRGV4A0A0C4DH28 118 aa13.93□□□□□ -0.18
HIGD1A-204ENST00000452906 K7EQD1 137 aa13.93□□□□□ -0.18
HIGD1A-204ENST00000452906 SPART-AS1P0CW21 52 aa13.93□□□□□ -0.18
HIGD1A-204ENST00000452906 ZNF479Q96JC4 524 aa13.93□□□□□ -0.18
HIGD1A-204ENST00000452906 TRBV6-4A0A1B0GX49 114 aa13.92□□□□□ -0.18
HIGD1A-204ENST00000452906 I3L3M4 83 aa13.92□□□□□ -0.18
HIGD1A-204ENST00000452906 CASC10Q5T4H9 136 aa13.92□□□□□ -0.18
HIGD1A-204ENST00000452906 FAM222AQ5U5X8 452 aa13.92□□□□□ -0.18
HIGD1A-204ENST00000452906 DKK2Q9UBU2 259 aa13.92□□□□□ -0.18
HIGD1A-204ENST00000452906 NUDT3O95989 172 aa13.91□□□□□ -0.18
HIGD1A-204ENST00000452906 DEFB130BP0DP73 79 aa13.91□□□□□ -0.18
HIGD1A-204ENST00000452906 DEFB130AP0DP74 79 aa13.91□□□□□ -0.18
HIGD1A-204ENST00000452906 RPL36AP83881 106 aaKnown RBP13.91□□□□□ -0.18
HIGD1A-204ENST00000452906 JOSD1Q15040 202 aaPredicted RBP13.91□□□□□ -0.18
HIGD1A-204ENST00000452906 RHOHQ15669 191 aa13.91□□□□□ -0.18
HIGD1A-204ENST00000452906 PMCHL1Q16048 86 aa13.91□□□□□ -0.18
HIGD1A-204ENST00000452906 RPL36ALQ969Q0 106 aaKnown RBP13.91□□□□□ -0.18
HIGD1A-204ENST00000452906 DAD1P61803 113 aa13.9□□□□□ -0.18
HIGD1A-204ENST00000452906 PRADC1Q9BSG0 188 aa13.9□□□□□ -0.18
HIGD1A-204ENST00000452906 MAP1LC3CQ9BXW4 147 aa13.9□□□□□ -0.18
HIGD1A-204ENST00000452906 C11orf68Q9H3H3 251 aaKnown RBP13.9□□□□□ -0.18
HIGD1A-204ENST00000452906 ATP5LO75964 103 aa13.89□□□□□ -0.19
HIGD1A-204ENST00000452906 BTF3P20290 206 aaKnown RBP13.89□□□□□ -0.19
HIGD1A-204ENST00000452906 KRTDAPP60985 99 aa13.89□□□□□ -0.19
HIGD1A-204ENST00000452906 NEXN-AS1Q8NBZ9 246 aa13.89□□□□□ -0.19
HIGD1A-204ENST00000452906 C20orf202A1L168 122 aa13.88□□□□□ -0.19
HIGD1A-204ENST00000452906 TRBV7-3A0A075B6L6 115 aa13.87□□□□□ -0.19
HIGD1A-204ENST00000452906 SLC25A29Q8N8R3 303 aa13.87□□□□□ -0.19
HIGD1A-204ENST00000452906 A0A096LNJ9 63 aa13.86□□□□□ -0.19
HIGD1A-204ENST00000452906 SCGB1D1O95968 90 aa13.86□□□□□ -0.19
HIGD1A-204ENST00000452906 C3orf79P0CE67 100 aa13.86□□□□□ -0.19
HIGD1A-204ENST00000452906 Q6ZSN1 163 aa13.86□□□□□ -0.19
HIGD1A-204ENST00000452906 DAZ4Q86SG3 579 aaKnown RBP13.86□□□□□ -0.19
HIGD1A-204ENST00000452906 DAZ3Q9NR90 486 aaKnown RBP13.86□□□□□ -0.19
HIGD1A-204ENST00000452906 CYSLTR1Q9Y271 337 aa13.86□□□□□ -0.19
HIGD1A-204ENST00000452906 ATP5G1P05496 136 aa13.85□□□□□ -0.19
HIGD1A-204ENST00000452906 FHL2Q14192 279 aa13.85□□□□□ -0.19
HIGD1A-204ENST00000452906 PYY3Q5JQD4 70 aa13.85□□□□□ -0.19
HIGD1A-204ENST00000452906 PET117Q6UWS5 81 aa13.85□□□□□ -0.19
HIGD1A-204ENST00000452906 LINC00518Q8N0U6 118 aa13.85□□□□□ -0.19
HIGD1A-204ENST00000452906 TOMM6Q96B49 74 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms