RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 DAZ3Q9NR90 486 aaKnown RBP8.6□□□□□ -1.03
CHD3-206ENST00000452447 CCL20P78556 96 aa8.59□□□□□ -1.03
CHD3-206ENST00000452447 MLST8Q9BVC4 326 aa8.59□□□□□ -1.03
CHD3-206ENST00000452447 BIN3Q9NQY0 253 aa8.59□□□□□ -1.03
CHD3-206ENST00000452447 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
CHD3-206ENST00000452447 SPANXN1Q5VSR9 72 aa8.58□□□□□ -1.04
CHD3-206ENST00000452447 KCNIP4Q6PIL6 250 aa8.58□□□□□ -1.04
CHD3-206ENST00000452447 NIT1Q86X76 327 aa8.58□□□□□ -1.04
CHD3-206ENST00000452447 OR10AG1Q8NH19 301 aa8.58□□□□□ -1.04
CHD3-206ENST00000452447 FRZBQ92765 325 aa8.58□□□□□ -1.04
CHD3-206ENST00000452447 A0A087WX48 190 aa8.57□□□□□ -1.04
CHD3-206ENST00000452447 CXCL1P09341 107 aa8.57□□□□□ -1.04
CHD3-206ENST00000452447 RPL35P42766 123 aaKnown RBP8.57□□□□□ -1.04
CHD3-206ENST00000452447 RAB4BP61018 213 aa8.57□□□□□ -1.04
CHD3-206ENST00000452447 ZNF56Q15929 161 aa8.57□□□□□ -1.04
CHD3-206ENST00000452447 RMI2Q96E14 147 aa8.57□□□□□ -1.04
CHD3-206ENST00000452447 COX11Q9Y6N1 276 aa8.57□□□□□ -1.04
CHD3-206ENST00000452447 S100A8P05109 93 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 SMIM6P0DI80 62 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 FAM74A3Q4VXF1 159 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 TMEM70Q9BUB7 260 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 MUC21A0A0G2JKD1 596 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 MUC21A0A140T8X8 626 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 F5H697 171 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 SNAI2O43623 268 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 OR5AL1P0C617 328 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 UBE2D3P61077 147 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 UBE2D2P62837 147 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 ELOBQ15370 118 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 C11orf52Q96A22 123 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 SSBP4Q9BWG4 385 aaPredicted RBP8.56□□□□□ -1.04
CHD3-206ENST00000452447 KLK12Q9UKR0 248 aa8.56□□□□□ -1.04
CHD3-206ENST00000452447 IGKV2D-24A0A075B6R9 120 aa8.55□□□□□ -1.04
CHD3-206ENST00000452447 LECT2O14960 151 aa8.55□□□□□ -1.04
CHD3-206ENST00000452447 SMR3BP02814 79 aaPredicted RBP8.55□□□□□ -1.04
CHD3-206ENST00000452447 SMIM17P0DL12 118 aa8.55□□□□□ -1.04
CHD3-206ENST00000452447 Q5VSD8 79 aa8.55□□□□□ -1.04
CHD3-206ENST00000452447 OR10G8Q8NGN5 311 aa8.55□□□□□ -1.04
CHD3-206ENST00000452447 DAZAP1Q96EP5 407 aaKnown RBP8.55□□□□□ -1.04
CHD3-206ENST00000452447 SMIM12Q96EX1 92 aa8.55□□□□□ -1.04
CHD3-206ENST00000452447 CHCHD7Q9BUK0 85 aa8.55□□□□□ -1.04
CHD3-206ENST00000452447 DERL1Q9BUN8 251 aa8.55□□□□□ -1.04
CHD3-206ENST00000452447 TMEM262E9PQX1 116 aa8.54□□□□□ -1.04
CHD3-206ENST00000452447 CEBPGP53567 150 aa8.54□□□□□ -1.04
CHD3-206ENST00000452447 WFDC2Q14508 124 aa8.54□□□□□ -1.04
CHD3-206ENST00000452447 BAALCQ8WXS3 180 aa8.54□□□□□ -1.04
CHD3-206ENST00000452447 UBE2WQ96B02 151 aa8.54□□□□□ -1.04
CHD3-206ENST00000452447 TRBV6-8A0A0A6YYG3 113 aa8.53□□□□□ -1.04
CHD3-206ENST00000452447 SRP19P09132 144 aaKnown RBP8.53□□□□□ -1.04
CHD3-206ENST00000452447 INAFM2P0DMQ5 153 aa8.53□□□□□ -1.04
CHD3-206ENST00000452447 S100PP25815 95 aa8.53□□□□□ -1.04
CHD3-206ENST00000452447 HAMPP81172 84 aa8.53□□□□□ -1.04
CHD3-206ENST00000452447 CENPWQ5EE01 88 aa8.53□□□□□ -1.04
CHD3-206ENST00000452447 NEXN-AS1Q8NBZ9 246 aa8.53□□□□□ -1.04
CHD3-206ENST00000452447 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
CHD3-206ENST00000452447 FLG2Q5D862 2391 aaPredicted RBP8.53□□□□□ -1.04
CHD3-206ENST00000452447 DMBT1Q9UGM3 2413 aaPredicted RBP8.53□□□□□ -1.04
CHD3-206ENST00000452447 SRRM2Q9UQ35 2752 aaKnown RBP8.52□□□□□ -1.04
CHD3-206ENST00000452447 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.52□□□□□ -1.04
CHD3-206ENST00000452447 ZNF727A8MUV8 499 aa8.52□□□□□ -1.04
CHD3-206ENST00000452447 FAM229AH3BQW9 127 aa8.52□□□□□ -1.04
CHD3-206ENST00000452447 GNG4P50150 75 aa8.52□□□□□ -1.04
CHD3-206ENST00000452447 AP1S3Q96PC3 154 aa8.52□□□□□ -1.04
CHD3-206ENST00000452447 SMIM7Q9BQ49 75 aa8.52□□□□□ -1.04
CHD3-206ENST00000452447 AKR1D1P51857 326 aa8.52□□□□□ -1.05
CHD3-206ENST00000452447 RPS20P60866 119 aaKnown RBP8.52□□□□□ -1.05
CHD3-206ENST00000452447 Q0VG73 95 aa8.52□□□□□ -1.05
CHD3-206ENST00000452447 PNRC1Q12796 327 aaPredicted RBP8.52□□□□□ -1.05
CHD3-206ENST00000452447 Q8N976 141 aa8.52□□□□□ -1.05
CHD3-206ENST00000452447 DNAJC30Q96LL9 226 aa8.52□□□□□ -1.05
CHD3-206ENST00000452447 SEC11CQ9BY50 192 aa8.52□□□□□ -1.05
CHD3-206ENST00000452447 CRPP02741 224 aa8.51□□□□□ -1.05
CHD3-206ENST00000452447 TMEM97Q5BJF2 176 aa8.51□□□□□ -1.05
CHD3-206ENST00000452447 FER1L6-AS1Q8NA97 138 aa8.51□□□□□ -1.05
CHD3-206ENST00000452447 OR2D3Q8NGH3 330 aa8.51□□□□□ -1.05
CHD3-206ENST00000452447 CHCHD5Q9BSY4 110 aa8.51□□□□□ -1.05
CHD3-206ENST00000452447 HERC1Q15751 4861 aa8.5□□□□□ -1.05
CHD3-206ENST00000452447 TMEM218A2RU14 115 aa8.5□□□□□ -1.05
CHD3-206ENST00000452447 XKRY2A2RUG3 117 aa8.5□□□□□ -1.05
CHD3-206ENST00000452447 GZMBP10144 247 aa8.5□□□□□ -1.05
CHD3-206ENST00000452447 PKIAP61925 76 aa8.5□□□□□ -1.05
CHD3-206ENST00000452447 FAM30AQ9NZY2 134 aa8.5□□□□□ -1.05
CHD3-206ENST00000452447 NAT8Q9UHE5 227 aa8.5□□□□□ -1.05
CHD3-206ENST00000452447 MYCBP2O75592 4640 aa8.49□□□□□ -1.05
CHD3-206ENST00000452447 LINC00587B1AMM8 73 aa8.49□□□□□ -1.05
CHD3-206ENST00000452447 IGLV2-8P01709 118 aa8.49□□□□□ -1.05
CHD3-206ENST00000452447 P01737 135 aa8.49□□□□□ -1.05
CHD3-206ENST00000452447 ANGP03950 147 aaKnown RBP8.49□□□□□ -1.05
CHD3-206ENST00000452447 CACNG7P62955 275 aa8.49□□□□□ -1.05
CHD3-206ENST00000452447 TMEM241Q24JQ0 296 aa8.49□□□□□ -1.05
CHD3-206ENST00000452447 MPV17L2Q567V2 206 aa8.49□□□□□ -1.05
CHD3-206ENST00000452447 C15orf54Q8N8G6 183 aa8.49□□□□□ -1.05
CHD3-206ENST00000452447 C1orf43Q9BWL3 253 aa8.49□□□□□ -1.05
CHD3-206ENST00000452447 KIF25-AS1Q9Y6Z4 181 aa8.49□□□□□ -1.05
CHD3-206ENST00000452447 C19orf71A6NCJ1 209 aa8.48□□□□□ -1.05
CHD3-206ENST00000452447 H7C1H1 209 aa8.48□□□□□ -1.05
CHD3-206ENST00000452447 MGPP08493 103 aa8.48□□□□□ -1.05
CHD3-206ENST00000452447 IGLC6P0CF74 106 aa8.48□□□□□ -1.05
CHD3-206ENST00000452447 SRSF3P84103 164 aaKnown RBP8.48□□□□□ -1.05
CHD3-206ENST00000452447 ATRAIDQ6UW56 229 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms