RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 HOXD3P31249 432 aaPredicted RBP8.45□□□□□ -1.06
SYVN1-204ENST00000449943 LRRC75A-AS1Q8N1F1 130 aa8.45□□□□□ -1.06
SYVN1-204ENST00000449943 OPRPNQ99935 248 aaPredicted RBP8.45□□□□□ -1.06
SYVN1-204ENST00000449943 IGLV4-69A0A075B6H9 119 aa8.45□□□□□ -1.06
SYVN1-204ENST00000449943 TMEM89A2RUT3 159 aa8.45□□□□□ -1.06
SYVN1-204ENST00000449943 KLLNB2CW77 178 aa8.45□□□□□ -1.06
SYVN1-204ENST00000449943 TMEM262E9PQX1 116 aa8.45□□□□□ -1.06
SYVN1-204ENST00000449943 RPL13AP40429 203 aaKnown RBP8.45□□□□□ -1.06
SYVN1-204ENST00000449943 AVPP01185 164 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 PMVKQ15126 192 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 INSL3P51460 131 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 ZNF876PQ49A33 203 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 APRG1Q8IVJ8 170 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 LRRK2Q5S007 2527 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 IGLV1-40P01703 118 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 DCANP1Q8TF63 244 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 TRGV1A0A0A0MS02 117 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 AZU1P20160 251 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 UBE2E2Q96LR5 201 aa8.44□□□□□ -1.06
SYVN1-204ENST00000449943 SPAG8Q99932 426 aaPredicted RBP8.44□□□□□ -1.06
SYVN1-204ENST00000449943 ITPR1Q14643 2758 aa8.43□□□□□ -1.06
SYVN1-204ENST00000449943 ZNF843Q8N446 348 aa8.43□□□□□ -1.06
SYVN1-204ENST00000449943 IGIPA6NJ69 53 aa8.43□□□□□ -1.06
SYVN1-204ENST00000449943 RPL35AP18077 110 aaKnown RBP8.43□□□□□ -1.06
SYVN1-204ENST00000449943 POLR2KP53803 58 aaKnown RBP8.43□□□□□ -1.06
SYVN1-204ENST00000449943 TSPEAR-AS2P59090 65 aa8.43□□□□□ -1.06
SYVN1-204ENST00000449943 SORL1Q92673 2214 aa8.43□□□□□ -1.06
SYVN1-204ENST00000449943 NXPH4O95158 308 aa8.43□□□□□ -1.06
SYVN1-204ENST00000449943 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
SYVN1-204ENST00000449943 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
SYVN1-204ENST00000449943 K7EMT4 169 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 GAGE12HA6NDE8 117 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 COX6CP09669 75 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 Q8N1Y9 231 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 RHODO00212 210 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 TSPAN13O95857 204 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 ZNRF2Q8NHG8 242 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 SIGMAR1Q99720 223 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 IGHV4OR15-8A0A075B7B6 117 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 A0A087WW49 117 aa8.42□□□□□ -1.06
SYVN1-204ENST00000449943 USP9YO00507 2555 aaPredicted RBP8.42□□□□□ -1.06
SYVN1-204ENST00000449943 IGHV3-73A0A0B4J1V6 119 aa8.41□□□□□ -1.06
SYVN1-204ENST00000449943 TRBV7-9A0A0J9YWB2 115 aa8.41□□□□□ -1.06
SYVN1-204ENST00000449943 CD28P10747 220 aa8.41□□□□□ -1.06
SYVN1-204ENST00000449943 XCL2Q9UBD3 114 aa8.41□□□□□ -1.06
SYVN1-204ENST00000449943 IGHV3-16A0A0C4DH30 117 aa8.41□□□□□ -1.06
SYVN1-204ENST00000449943 A0A0J9YY99 117 aa8.41□□□□□ -1.06
SYVN1-204ENST00000449943 HTN3P15516 51 aa8.41□□□□□ -1.06
SYVN1-204ENST00000449943 DLX4Q92988 240 aaPredicted RBP8.41□□□□□ -1.06
SYVN1-204ENST00000449943 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
SYVN1-204ENST00000449943 PRO0461Q9UI25 63 aa8.41□□□□□ -1.06
SYVN1-204ENST00000449943 USP9XQ93008 2570 aaPredicted RBP8.41□□□□□ -1.06
SYVN1-204ENST00000449943 POM121L12Q8N7R1 296 aa8.41□□□□□ -1.06
SYVN1-204ENST00000449943 TRPT1Q86TN4 253 aaKnown RBP8.4□□□□□ -1.06
SYVN1-204ENST00000449943 TLN2Q9Y4G6 2542 aa8.4□□□□□ -1.06
SYVN1-204ENST00000449943 H7C2G1 150 aa8.4□□□□□ -1.07
SYVN1-204ENST00000449943 CIDEAO60543 219 aa8.4□□□□□ -1.07
SYVN1-204ENST00000449943 CFHR3Q02985 330 aa8.4□□□□□ -1.07
SYVN1-204ENST00000449943 DPH3Q96FX2 82 aa8.4□□□□□ -1.07
SYVN1-204ENST00000449943 A0A0J9YX75 114 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 CCL24O00175 119 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 CELSR2Q9HCU4 2923 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 A8MWV9 139 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 J3QQQ9 107 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 TMEM86BQ8N661 226 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 PTH2Q96A98 100 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 LGALS9O00182 355 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 PSMB8P28062 276 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 UBE2D1P51668 147 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 DEFB136Q30KP8 78 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 M0QY20 66 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 BRI3O95415 125 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 NDUFA11Q86Y39 141 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 CRYBG3Q68DQ2 2970 aa8.39□□□□□ -1.07
SYVN1-204ENST00000449943 TRBV27A0A0K0K1C4 114 aa8.38□□□□□ -1.07
SYVN1-204ENST00000449943 C3orf56Q8N813 242 aa8.38□□□□□ -1.07
SYVN1-204ENST00000449943 C9orf85Q96MD7 179 aa8.38□□□□□ -1.07
SYVN1-204ENST00000449943 RPL32P62910 135 aaKnown RBP8.38□□□□□ -1.07
SYVN1-204ENST00000449943 TRAV2A0A0B4J234 112 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 CHCHD5Q9BSY4 110 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 PRM2P04554 102 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 P0DMU3 169 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 FAM231AP0DMU4 169 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 FAM231CP0DMU5 169 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 SLURP1P55000 103 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 IGHV3-30P01768 117 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 CFC1BP0CG36 223 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 CFC1P0CG37 223 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 IGHV3-30-5P0DP03 117 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 IGHV4-31P0DP07 118 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
SYVN1-204ENST00000449943 IGHV3-53P01767 116 aa8.37□□□□□ -1.07
SYVN1-204ENST00000449943 RNASE13Q5GAN3 156 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms