RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 C2orf66Q6UXQ4 117 aa10.94□□□□□ -0.66
SF1-211ENST00000448404 IGHV3-16A0A0C4DH30 117 aa10.94□□□□□ -0.66
SF1-211ENST00000448404 ELANEP08246 267 aa10.94□□□□□ -0.66
SF1-211ENST00000448404 MRAP2Q96G30 205 aa10.94□□□□□ -0.66
SF1-211ENST00000448404 CKS1BP61024 79 aa10.93□□□□□ -0.66
SF1-211ENST00000448404 ZNF56Q15929 161 aa10.93□□□□□ -0.66
SF1-211ENST00000448404 ETDBQ3ZM63 59 aa10.93□□□□□ -0.66
SF1-211ENST00000448404 SMR3AQ99954 134 aa10.93□□□□□ -0.66
SF1-211ENST00000448404 NHP2Q9NX24 153 aaKnown RBP10.93□□□□□ -0.66
SF1-211ENST00000448404 SIVA1O15304 175 aa10.92□□□□□ -0.66
SF1-211ENST00000448404 DPM2O94777 84 aa10.92□□□□□ -0.66
SF1-211ENST00000448404 SCGB1A1P11684 91 aa10.92□□□□□ -0.66
SF1-211ENST00000448404 Q6ZSV7 163 aa10.92□□□□□ -0.66
SF1-211ENST00000448404 TRAV26-1A0A087WT03 109 aa10.92□□□□□ -0.66
SF1-211ENST00000448404 AMTNQ6UX39 209 aa10.92□□□□□ -0.66
SF1-211ENST00000448404 ZNF876PQ49A33 203 aa10.91□□□□□ -0.66
SF1-211ENST00000448404 ZMAT4Q9H898 229 aa10.91□□□□□ -0.66
SF1-211ENST00000448404 DNAJC9-AS1A6NH13 148 aa10.91□□□□□ -0.66
SF1-211ENST00000448404 H3BMG7 143 aa10.91□□□□□ -0.66
SF1-211ENST00000448404 SCGB2A2Q13296 93 aa10.91□□□□□ -0.66
SF1-211ENST00000448404 MORN3Q6PF18 240 aaPredicted RBP10.91□□□□□ -0.66
SF1-211ENST00000448404 SPANXB1Q9NS25 103 aaPredicted RBP10.91□□□□□ -0.66
SF1-211ENST00000448404 IGHV1OR15-1A0A075B7D0 117 aa10.9□□□□□ -0.66
SF1-211ENST00000448404 SPAG8Q99932 426 aaPredicted RBP10.9□□□□□ -0.66
SF1-211ENST00000448404 TP53TG1Q9Y2A0 90 aa10.9□□□□□ -0.66
SF1-211ENST00000448404 IGHV3OR16-12A0A075B7B8 117 aa10.9□□□□□ -0.66
SF1-211ENST00000448404 SDHAF1A6NFY7 115 aa10.9□□□□□ -0.66
SF1-211ENST00000448404 INSL3P51460 131 aa10.9□□□□□ -0.66
SF1-211ENST00000448404 TSHBP01222 138 aa10.89□□□□□ -0.67
SF1-211ENST00000448404 BAALCQ8WXS3 180 aa10.89□□□□□ -0.67
SF1-211ENST00000448404 A0A087WX48 190 aa10.89□□□□□ -0.67
SF1-211ENST00000448404 LINC01619G3V211 115 aa10.89□□□□□ -0.67
SF1-211ENST00000448404 ATP5LO75964 103 aa10.89□□□□□ -0.67
SF1-211ENST00000448404 TRBV25-1A0A075B6N4 114 aa10.88□□□□□ -0.67
SF1-211ENST00000448404 PRSS29PA6NIE9 313 aa10.88□□□□□ -0.67
SF1-211ENST00000448404 CRYGDP07320 174 aa10.88□□□□□ -0.67
SF1-211ENST00000448404 CD28P10747 220 aa10.88□□□□□ -0.67
SF1-211ENST00000448404 CRYBA4P53673 196 aa10.88□□□□□ -0.67
SF1-211ENST00000448404 CHAC1Q9BUX1 264 aa10.88□□□□□ -0.67
SF1-211ENST00000448404 J3QR89 54 aa10.88□□□□□ -0.67
SF1-211ENST00000448404 TOMM6Q96B49 74 aa10.88□□□□□ -0.67
SF1-211ENST00000448404 LGALS9O00182 355 aa10.87□□□□□ -0.67
SF1-211ENST00000448404 ZFP2Q6ZN57 461 aa10.87□□□□□ -0.67
SF1-211ENST00000448404 PHLDA1Q8WV24 401 aaPredicted RBP10.87□□□□□ -0.67
SF1-211ENST00000448404 C9orf85Q96MD7 179 aa10.87□□□□□ -0.67
SF1-211ENST00000448404 NXPH4O95158 308 aa10.87□□□□□ -0.67
SF1-211ENST00000448404 NEXN-AS1Q8NBZ9 246 aa10.87□□□□□ -0.67
SF1-211ENST00000448404 DYNLRB2Q8TF09 96 aa10.87□□□□□ -0.67
SF1-211ENST00000448404 RAX2Q96IS3 184 aa10.87□□□□□ -0.67
SF1-211ENST00000448404 C20orf78Q9BR46 151 aa10.87□□□□□ -0.67
SF1-211ENST00000448404 WFDC10AQ9H1F0 79 aa10.87□□□□□ -0.67
SF1-211ENST00000448404 KMT2BQ9UMN6 2715 aaPredicted RBP10.86□□□□□ -0.67
SF1-211ENST00000448404 ORMDL2Q53FV1 153 aa10.86□□□□□ -0.67
SF1-211ENST00000448404 RNASE13Q5GAN3 156 aaKnown RBP10.86□□□□□ -0.67
SF1-211ENST00000448404 XCL2Q9UBD3 114 aa10.86□□□□□ -0.67
SF1-211ENST00000448404 TENM1Q9UKZ4 2725 aa10.86□□□□□ -0.67
SF1-211ENST00000448404 F8W1H4 67 aa10.86□□□□□ -0.67
SF1-211ENST00000448404 H3BMM0 161 aa10.86□□□□□ -0.67
SF1-211ENST00000448404 CEMP1Q6PRD7 247 aaPredicted RBP10.86□□□□□ -0.67
SF1-211ENST00000448404 FOXI2Q6ZQN5 318 aa10.86□□□□□ -0.67
SF1-211ENST00000448404 Q6ZSN1 163 aa10.86□□□□□ -0.67
SF1-211ENST00000448404 SPATA25Q9BR10 227 aa10.86□□□□□ -0.67
SF1-211ENST00000448404 YAE1D1Q9NRH1 226 aa10.86□□□□□ -0.67
SF1-211ENST00000448404 TMEM89A2RUT3 159 aa10.85□□□□□ -0.67
SF1-211ENST00000448404 M0QY20 66 aa10.85□□□□□ -0.67
SF1-211ENST00000448404 CITED2Q99967 270 aaPredicted RBP10.85□□□□□ -0.67
SF1-211ENST00000448404 F8VRH5 84 aa10.85□□□□□ -0.67
SF1-211ENST00000448404 POLR2KP53803 58 aaKnown RBP10.85□□□□□ -0.67
SF1-211ENST00000448404 RNF152Q8N8N0 203 aa10.85□□□□□ -0.67
SF1-211ENST00000448404 ZNF479Q96JC4 524 aa10.85□□□□□ -0.67
SF1-211ENST00000448404 MAP6D1Q9H9H5 199 aa10.85□□□□□ -0.67
SF1-211ENST00000448404 IGHV3-64A0A075B6Q5 118 aa10.84□□□□□ -0.67
SF1-211ENST00000448404 TRBV7-9A0A0J9YWB2 115 aa10.84□□□□□ -0.67
SF1-211ENST00000448404 IGLL5B9A064 214 aa10.84□□□□□ -0.67
SF1-211ENST00000448404 MED14OSP0DP75 135 aa10.84□□□□□ -0.67
SF1-211ENST00000448404 GEMIN7Q9H840 131 aaKnown RBP10.84□□□□□ -0.67
SF1-211ENST00000448404 C11orf86A6NJI1 115 aa10.83□□□□□ -0.68
SF1-211ENST00000448404 E9PLD3 99 aa10.83□□□□□ -0.68
SF1-211ENST00000448404 H7C1H1 209 aa10.83□□□□□ -0.68
SF1-211ENST00000448404 KRTAP1-1Q07627 177 aa10.83□□□□□ -0.68
SF1-211ENST00000448404 CEND1Q8N111 149 aa10.83□□□□□ -0.68
SF1-211ENST00000448404 MRPL16Q9NX20 251 aaKnown RBP10.83□□□□□ -0.68
SF1-211ENST00000448404 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
SF1-211ENST00000448404 LRRC75A-AS1Q8N1F1 130 aa10.83□□□□□ -0.68
SF1-211ENST00000448404 Q8N2B8 174 aa10.83□□□□□ -0.68
SF1-211ENST00000448404 C4orf3Q8WVX3 66 aa10.83□□□□□ -0.68
SF1-211ENST00000448404 TRRAPQ9Y4A5 3859 aa10.83□□□□□ -0.68
SF1-211ENST00000448404 IGHV3-38A0A0C4DH36 116 aa10.82□□□□□ -0.68
SF1-211ENST00000448404 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
SF1-211ENST00000448404 PLEKHB2Q96CS7 222 aa10.82□□□□□ -0.68
SF1-211ENST00000448404 HLA-DRB4P13762 266 aa10.82□□□□□ -0.68
SF1-211ENST00000448404 LINC01587Q99440 93 aa10.82□□□□□ -0.68
SF1-211ENST00000448404 CYSLTR1Q9Y271 337 aa10.82□□□□□ -0.68
SF1-211ENST00000448404 HLA-DRB4X5D2U9 266 aa10.82□□□□□ -0.68
SF1-211ENST00000448404 A0A1B0GWB2 263 aa10.81□□□□□ -0.68
SF1-211ENST00000448404 ODF3L2Q3SX64 289 aa10.81□□□□□ -0.68
SF1-211ENST00000448404 KIR2DL4Q99706 377 aa10.81□□□□□ -0.68
SF1-211ENST00000448404 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
SF1-211ENST00000448404 HIGD1BQ9P298 99 aa10.81□□□□□ -0.68
SF1-211ENST00000448404 IGIPA6NJ69 53 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 314.4 ms