RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 MRPL35Q9NZE8 188 aaKnown RBP12.06□□□□□ -0.48
OTUB1-204ENST00000447683 IGHV1OR15-1A0A075B7D0 117 aa12.05□□□□□ -0.48
OTUB1-204ENST00000447683 TRAV12-1A0A0B4J245 112 aa12.05□□□□□ -0.48
OTUB1-204ENST00000447683 NAA38Q9BRA0 125 aaKnown RBP12.05□□□□□ -0.48
OTUB1-204ENST00000447683 IGKV2D-26A0A0A0MRZ7 120 aa12.05□□□□□ -0.48
OTUB1-204ENST00000447683 Q8N1Y9 231 aa12.05□□□□□ -0.48
OTUB1-204ENST00000447683 MDFICQ9P1T7 246 aa12.05□□□□□ -0.48
OTUB1-204ENST00000447683 TRAV2A0A0B4J234 112 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 A8MTW9 85 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 SUMO4Q6EEV6 95 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 SYT8Q8NBV8 401 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 CITED1Q99966 193 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 H3BMG7 143 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 APOMO95445 188 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 WFDC11Q8NEX6 87 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 PHLDA1Q8WV24 401 aaPredicted RBP12.04□□□□□ -0.48
OTUB1-204ENST00000447683 SCGB3A1Q96QR1 104 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 PRO0461Q9UI25 63 aa12.04□□□□□ -0.48
OTUB1-204ENST00000447683 APCP25054 2843 aa12.03□□□□□ -0.48
OTUB1-204ENST00000447683 POLR2KP53803 58 aaKnown RBP12.03□□□□□ -0.48
OTUB1-204ENST00000447683 ZC2HC1BQ5TFG8 222 aa12.03□□□□□ -0.48
OTUB1-204ENST00000447683 C2orf66Q6UXQ4 117 aa12.03□□□□□ -0.48
OTUB1-204ENST00000447683 TMEM160Q9NX00 188 aa12.03□□□□□ -0.48
OTUB1-204ENST00000447683 PEMTQ9UBM1 199 aa12.03□□□□□ -0.48
OTUB1-204ENST00000447683 A0A087WWL8 130 aa12.03□□□□□ -0.48
OTUB1-204ENST00000447683 HLA-DRB4P13762 266 aa12.03□□□□□ -0.48
OTUB1-204ENST00000447683 TMEM126AQ9H061 195 aa12.03□□□□□ -0.48
OTUB1-204ENST00000447683 HLA-DRB4X5D2U9 266 aa12.03□□□□□ -0.48
OTUB1-204ENST00000447683 MT-ATP8P03928 68 aa12.02□□□□□ -0.49
OTUB1-204ENST00000447683 NEXN-AS1Q8NBZ9 246 aa12.02□□□□□ -0.49
OTUB1-204ENST00000447683 F8VRH5 84 aa12.02□□□□□ -0.49
OTUB1-204ENST00000447683 H7C1H1 209 aa12.02□□□□□ -0.49
OTUB1-204ENST00000447683 PLNP26678 52 aa12.02□□□□□ -0.49
OTUB1-204ENST00000447683 Q6ZSV7 163 aa12.02□□□□□ -0.49
OTUB1-204ENST00000447683 SH2D6Q7Z4S9 175 aa12.02□□□□□ -0.49
OTUB1-204ENST00000447683 GTSCR1Q86UQ5 136 aa12.02□□□□□ -0.49
OTUB1-204ENST00000447683 TRBV6-5A0A0K0K1A5 114 aa12.01□□□□□ -0.49
OTUB1-204ENST00000447683 DEFB131AP59861 70 aa12.01□□□□□ -0.49
OTUB1-204ENST00000447683 PTH2Q96A98 100 aa12.01□□□□□ -0.49
OTUB1-204ENST00000447683 CRYGDP07320 174 aa12□□□□□ -0.49
OTUB1-204ENST00000447683 TAL2Q16559 108 aa12□□□□□ -0.49
OTUB1-204ENST00000447683 TRGV11A0A075B6L2 103 aa12□□□□□ -0.49
OTUB1-204ENST00000447683 KNCNA6PVL3 124 aa12□□□□□ -0.49
OTUB1-204ENST00000447683 XGP55808 180 aa12□□□□□ -0.49
OTUB1-204ENST00000447683 Q6Q795 121 aa12□□□□□ -0.49
OTUB1-204ENST00000447683 TMEM61Q8N0U2 210 aa12□□□□□ -0.49
OTUB1-204ENST00000447683 DLX4Q92988 240 aaPredicted RBP12□□□□□ -0.49
OTUB1-204ENST00000447683 DUX3Q96PT4 197 aa12□□□□□ -0.49
OTUB1-204ENST00000447683 F5H697 171 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 H3BMM0 161 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 VCYO14598 125 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 KLHL30-AS1Q8NEE0 82 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 DNAJC9-AS1A6NH13 148 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 LINC01549A6NIU2 74 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 IGLL5B9A064 214 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 RHODO00212 210 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 RBMY1A1P0DJD3 496 aaKnown RBP11.99□□□□□ -0.49
OTUB1-204ENST00000447683 RBMY1CP0DJD4 496 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 RBMY1FQ15415 496 aaKnown RBP11.99□□□□□ -0.49
OTUB1-204ENST00000447683 BAALCQ8WXS3 180 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 ITPR3Q14573 2671 aa11.99□□□□□ -0.49
OTUB1-204ENST00000447683 A0A1B0GWB2 263 aa11.98□□□□□ -0.49
OTUB1-204ENST00000447683 NHLRC4P0CG21 123 aaPredicted RBP11.98□□□□□ -0.49
OTUB1-204ENST00000447683 KHDC1LQ5JSQ8 128 aa11.98□□□□□ -0.49
OTUB1-204ENST00000447683 TTTY13Q9BZ97 58 aa11.98□□□□□ -0.49
OTUB1-204ENST00000447683 TRBV27A0A0K0K1C4 114 aa11.98□□□□□ -0.49
OTUB1-204ENST00000447683 ZFP2Q6ZN57 461 aa11.98□□□□□ -0.49
OTUB1-204ENST00000447683 ZNF256Q9Y2P7 627 aaPredicted RBP11.98□□□□□ -0.49
OTUB1-204ENST00000447683 TLN2Q9Y4G6 2542 aa11.97□□□□□ -0.49
OTUB1-204ENST00000447683 TRAV25A0A0B4J276 109 aa11.97□□□□□ -0.49
OTUB1-204ENST00000447683 SDHAF1A6NFY7 115 aa11.97□□□□□ -0.49
OTUB1-204ENST00000447683 M0QY20 66 aa11.97□□□□□ -0.49
OTUB1-204ENST00000447683 FAM74A4Q5TZK3 123 aa11.97□□□□□ -0.49
OTUB1-204ENST00000447683 HIST2H2BCQ6DN03 193 aa11.97□□□□□ -0.49
OTUB1-204ENST00000447683 MORN3Q6PF18 240 aaPredicted RBP11.97□□□□□ -0.49
OTUB1-204ENST00000447683 MYO9AB2RTY4 2548 aa11.97□□□□□ -0.49
OTUB1-204ENST00000447683 RBMY1BA6NDE4 496 aaKnown RBP11.97□□□□□ -0.49
OTUB1-204ENST00000447683 RBMY1EA6NEQ0 496 aaKnown RBP11.97□□□□□ -0.49
OTUB1-204ENST00000447683 RBMY1DP0C7P1 496 aaKnown RBP11.97□□□□□ -0.49
OTUB1-204ENST00000447683 DEFB114Q30KQ6 69 aa11.97□□□□□ -0.49
OTUB1-204ENST00000447683 PPDPFLQ8WWR9 84 aa11.97□□□□□ -0.49
OTUB1-204ENST00000447683 KIR2DL4Q99706 377 aa11.97□□□□□ -0.49
OTUB1-204ENST00000447683 TRBV25-1A0A075B6N4 114 aa11.95□□□□□ -0.5
OTUB1-204ENST00000447683 PRSS29PA6NIE9 313 aa11.95□□□□□ -0.5
OTUB1-204ENST00000447683 IGIPA6NJ69 53 aa11.95□□□□□ -0.5
OTUB1-204ENST00000447683 ZNF56Q15929 161 aa11.95□□□□□ -0.5
OTUB1-204ENST00000447683 ZNF876PQ49A33 203 aa11.95□□□□□ -0.5
OTUB1-204ENST00000447683 DYNLRB2Q8TF09 96 aa11.95□□□□□ -0.5
OTUB1-204ENST00000447683 MAP6D1Q9H9H5 199 aa11.95□□□□□ -0.5
OTUB1-204ENST00000447683 ZNF469Q96JG9 3925 aaPredicted RBP11.95□□□□□ -0.5
OTUB1-204ENST00000447683 NDUFV3P56181 108 aaKnown RBP11.95□□□□□ -0.5
OTUB1-204ENST00000447683 ESM1Q9NQ30 184 aa11.95□□□□□ -0.5
OTUB1-204ENST00000447683 TSHBP01222 138 aa11.94□□□□□ -0.5
OTUB1-204ENST00000447683 GCSHP23434 173 aa11.94□□□□□ -0.5
OTUB1-204ENST00000447683 KRTAP1-1Q07627 177 aa11.94□□□□□ -0.5
OTUB1-204ENST00000447683 MAPKAPK5-AS1Q8N8E1 139 aa11.94□□□□□ -0.5
OTUB1-204ENST00000447683 SPANXCQ9NY87 97 aa11.94□□□□□ -0.5
OTUB1-204ENST00000447683 TP53TG1Q9Y2A0 90 aa11.94□□□□□ -0.5
OTUB1-204ENST00000447683 INSL3P51460 131 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms