RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 RNASE4P34096 147 aaKnown RBP4.82□□□□□ -1.64
HDAC9-216ENST00000446646 TCL1AP56279 114 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 LINC00315P59091 139 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-216ENST00000446646 DAD1P61803 113 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 ERCC8Q13216 396 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 UBE2V1Q13404 147 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 ZNF726P1Q15940 193 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 OR10J3Q5JRS4 329 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 C1orf158Q8N1D5 194 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 C9orf62Q8N4C0 152 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 TMEM75Q8N9X5 138 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 FMC1Q96HJ9 113 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 SIGMAR1Q99720 223 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 AGPAT4-IT1Q9H0P7 198 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 SPANXCQ9NY87 97 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 EPDR1Q9UM22 224 aa4.82□□□□□ -1.64
HDAC9-216ENST00000446646 YTHDF2Q9Y5A9 579 aaKnown RBP4.82□□□□□ -1.64
HDAC9-216ENST00000446646 TIMM8BQ9Y5J9 83 aaPredicted RBP4.82□□□□□ -1.64
HDAC9-216ENST00000446646 TRAV21A0A0B4J279 112 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 LINC00862A6NCI5 91 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 FAM74A7A6NL05 159 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 GGTLC3B5MD39 225 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 PEX7O00628 323 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 PRM2P04554 102 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 GNG5P63218 68 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 GAGE2BQ13066 116 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 GAGE2EQ4V326 116 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 GAGE2AQ6NT46 116 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 Q8TAT8 98 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 MBD3L1Q8WWY6 194 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 KCNS1Q96KK3 526 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 VGLL1Q99990 258 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 LINC00467Q9BRT7 94 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 GAGE2DQ9UEU5 116 aa4.81□□□□□ -1.64
HDAC9-216ENST00000446646 IGHV1OR15-1A0A075B7D0 117 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 TGIF2-C20orf24A0A0A6YYL0 155 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 TRAV1-1A0A0B4J248 108 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 A0A1B0GV50 99 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 C20orf202A1L168 122 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 ZNF705GA8MUZ8 300 aaPredicted RBP4.8□□□□□ -1.64
HDAC9-216ENST00000446646 ATP5LO75964 103 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 BTN1A1Q13410 526 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 ANXA2RQ3ZCQ2 193 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 FAM74A3Q4VXF1 159 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 IBA57Q5T440 356 aaKnown RBP4.8□□□□□ -1.64
HDAC9-216ENST00000446646 Q6AWC8 147 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 ATRAIDQ6UW56 229 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 PRNTQ86SH4 94 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 COMMD7Q86VX2 200 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 DEFB104AQ8WTQ1 72 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 MRAP2Q96G30 205 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 FAM19A4Q96LR4 140 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 MAP1LC3AQ9H492 121 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 SDF2L1Q9HCN8 221 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
HDAC9-216ENST00000446646 TRAV8-1A0A0A6YYK1 113 aa4.79□□□□□ -1.64
HDAC9-216ENST00000446646 PFN1P07737 140 aaKnown RBP4.79□□□□□ -1.64
HDAC9-216ENST00000446646 CD300CQ08708 224 aa4.79□□□□□ -1.64
HDAC9-216ENST00000446646 GAGE5Q13069 117 aa4.79□□□□□ -1.64
HDAC9-216ENST00000446646 GAGE6Q13070 117 aa4.79□□□□□ -1.64
HDAC9-216ENST00000446646 FAM19A5Q7Z5A7 132 aaPredicted RBP4.79□□□□□ -1.64
HDAC9-216ENST00000446646 Q86TA4 180 aa4.79□□□□□ -1.64
HDAC9-216ENST00000446646 ZFAND2AQ8N6M9 145 aa4.79□□□□□ -1.64
HDAC9-216ENST00000446646 GNG13Q9P2W3 67 aa4.79□□□□□ -1.64
HDAC9-216ENST00000446646 ZFP30Q9Y2G7 519 aa4.79□□□□□ -1.64
HDAC9-216ENST00000446646 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 TRGV2A0A075B6R0 118 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 A0A087WTM6 91 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 M0R143 59 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 ZNF324O75467 553 aaPredicted RBP4.78□□□□□ -1.64
HDAC9-216ENST00000446646 GCGP01275 180 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 ATP5G1P05496 136 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 DEFB130BP0DP73 79 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 DEFB130AP0DP74 79 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 ATP5G3P48201 142 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 CCL18P55774 89 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 DAZ2Q13117 558 aaKnown RBP4.78□□□□□ -1.64
HDAC9-216ENST00000446646 ALKAL2Q6UX46 152 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 FA2HQ7L5A8 372 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 NOP10Q9NPE3 64 aaKnown RBP4.78□□□□□ -1.64
HDAC9-216ENST00000446646 SS18L2Q9UHA2 77 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
HDAC9-216ENST00000446646 TRBV6-1A0A0K0K1D8 114 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 KRBOX1C9JBD0 128 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 OXTP01178 125 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 BCL2P10415 239 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 S100A4P26447 101 aaKnown RBP4.77□□□□□ -1.65
HDAC9-216ENST00000446646 MEF2BQ02080 365 aaPredicted RBP4.77□□□□□ -1.65
HDAC9-216ENST00000446646 CD164Q04900 197 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 PMVKQ15126 192 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 TMEM183BQ1AE95 376 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 TDRG1Q3Y452 100 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 MUC21Q5SSG8 566 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 FAM162BQ5T6X4 162 aa4.77□□□□□ -1.65
HDAC9-216ENST00000446646 TMEM183AQ8IXX5 376 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms