RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 VCYO14598 125 aa10.03□□□□□ -0.8
RBM39-216ENST00000444878 DPM2O94777 84 aa10.03□□□□□ -0.8
RBM39-216ENST00000444878 INSP01308 110 aa10.03□□□□□ -0.8
RBM39-216ENST00000444878 POLR2KP53803 58 aaKnown RBP10.03□□□□□ -0.8
RBM39-216ENST00000444878 C2orf66Q6UXQ4 117 aa10.03□□□□□ -0.8
RBM39-216ENST00000444878 STHQ8IWL8 128 aa10.03□□□□□ -0.8
RBM39-216ENST00000444878 LINC01587Q99440 93 aa10.03□□□□□ -0.8
RBM39-216ENST00000444878 NACAE9PAV3 2078 aa10.02□□□□□ -0.8
RBM39-216ENST00000444878 SDHAF1A6NFY7 115 aa10.02□□□□□ -0.81
RBM39-216ENST00000444878 PROK1P58294 105 aa10.02□□□□□ -0.81
RBM39-216ENST00000444878 KIR2DL4Q99706 377 aa10.02□□□□□ -0.81
RBM39-216ENST00000444878 M0QY20 66 aa10.01□□□□□ -0.81
RBM39-216ENST00000444878 PRM2P04554 102 aa10.01□□□□□ -0.81
RBM39-216ENST00000444878 ZNF415Q09FC8 603 aa10.01□□□□□ -0.81
RBM39-216ENST00000444878 NSUN5P1Q3KNT7 163 aa10.01□□□□□ -0.81
RBM39-216ENST00000444878 A0A087WX48 190 aa10.01□□□□□ -0.81
RBM39-216ENST00000444878 TRBV6-5A0A0K0K1A5 114 aa10.01□□□□□ -0.81
RBM39-216ENST00000444878 NMUP48645 174 aa10.01□□□□□ -0.81
RBM39-216ENST00000444878 SEC61GP60059 68 aa10.01□□□□□ -0.81
RBM39-216ENST00000444878 MRPL35Q9NZE8 188 aaKnown RBP10.01□□□□□ -0.81
RBM39-216ENST00000444878 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
RBM39-216ENST00000444878 JMJD1CQ15652 2540 aa10.01□□□□□ -0.81
RBM39-216ENST00000444878 NIPBLQ6KC79 2804 aaeCLIP10.01□□□□□ -0.819e-8■□□□□ 8.9
RBM39-216ENST00000444878 M0R2P5 195 aa10□□□□□ -0.81
RBM39-216ENST00000444878 MPV17L2Q567V2 206 aa10□□□□□ -0.81
RBM39-216ENST00000444878 TRPT1Q86TN4 253 aaKnown RBP10□□□□□ -0.81
RBM39-216ENST00000444878 OTOGQ6ZRI0 2925 aa10□□□□□ -0.81
RBM39-216ENST00000444878 TRBV27A0A0K0K1C4 114 aa10□□□□□ -0.81
RBM39-216ENST00000444878 FGF6P10767 208 aa10□□□□□ -0.81
RBM39-216ENST00000444878 ZFP2Q6ZN57 461 aa10□□□□□ -0.81
RBM39-216ENST00000444878 BOD1L2Q8IYS8 172 aa10□□□□□ -0.81
RBM39-216ENST00000444878 XCL2Q9UBD3 114 aa10□□□□□ -0.81
RBM39-216ENST00000444878 CYSLTR1Q9Y271 337 aa10□□□□□ -0.81
RBM39-216ENST00000444878 TRAV12-1A0A0B4J245 112 aa9.99□□□□□ -0.81
RBM39-216ENST00000444878 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
RBM39-216ENST00000444878 MORN3Q6PF18 240 aaPredicted RBP9.99□□□□□ -0.81
RBM39-216ENST00000444878 DEFB104AQ8WTQ1 72 aa9.99□□□□□ -0.81
RBM39-216ENST00000444878 TMEM208Q9BTX3 173 aa9.99□□□□□ -0.81
RBM39-216ENST00000444878 FN1P02751 2386 aaKnown RBP9.99□□□□□ -0.81
RBM39-216ENST00000444878 DLEU1O43261 78 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 ZC2HC1BQ5TFG8 222 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 C12orf54Q6X4T0 127 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 C2orf91Q6ZV80 131 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 LINC00467Q9BRT7 94 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 LINC01549A6NIU2 74 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 A8MWV9 139 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 F8VRH5 84 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 H7C1H1 209 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 PLNP26678 52 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 CMC4P56277 68 aaPredicted RBP9.98□□□□□ -0.81
RBM39-216ENST00000444878 NEXN-AS1Q8NBZ9 246 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 TP53TG1Q9Y2A0 90 aa9.98□□□□□ -0.81
RBM39-216ENST00000444878 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
RBM39-216ENST00000444878 GTSCR1Q86UQ5 136 aa9.97□□□□□ -0.81
RBM39-216ENST00000444878 PCP2Q8IVA1 136 aa9.97□□□□□ -0.81
RBM39-216ENST00000444878 IGHV3-73A0A0B4J1V6 119 aa9.97□□□□□ -0.81
RBM39-216ENST00000444878 A0A0U1RRA0 63 aa9.97□□□□□ -0.81
RBM39-216ENST00000444878 IGLV1-51P01701 117 aa9.97□□□□□ -0.81
RBM39-216ENST00000444878 C11orf72Q8NBR9 251 aa9.97□□□□□ -0.81
RBM39-216ENST00000444878 BAALCQ8WXS3 180 aa9.97□□□□□ -0.81
RBM39-216ENST00000444878 C2CD3Q4AC94 2353 aa9.96□□□□□ -0.81
RBM39-216ENST00000444878 NSD1Q96L73 2696 aaPredicted RBP9.96□□□□□ -0.81
RBM39-216ENST00000444878 IGHV3OR16-12A0A075B7B8 117 aa9.96□□□□□ -0.82
RBM39-216ENST00000444878 INAFM1C9JVW0 142 aa9.96□□□□□ -0.82
RBM39-216ENST00000444878 BVES-AS1Q5T3Y7 98 aa9.96□□□□□ -0.82
RBM39-216ENST00000444878 PTH2Q96A98 100 aa9.96□□□□□ -0.82
RBM39-216ENST00000444878 IGKV2D-26A0A0A0MRZ7 120 aa9.95□□□□□ -0.82
RBM39-216ENST00000444878 ZNF25P17030 456 aaPredicted RBP9.95□□□□□ -0.82
RBM39-216ENST00000444878 RIPPLY3P57055 190 aa9.95□□□□□ -0.82
RBM39-216ENST00000444878 RBX1P62877 108 aa9.95□□□□□ -0.82
RBM39-216ENST00000444878 RPL39P62891 51 aaKnown RBP9.95□□□□□ -0.82
RBM39-216ENST00000444878 NDUFA11Q86Y39 141 aa9.95□□□□□ -0.82
RBM39-216ENST00000444878 PRSS29PA6NIE9 313 aa9.94□□□□□ -0.82
RBM39-216ENST00000444878 I3L3M4 83 aa9.94□□□□□ -0.82
RBM39-216ENST00000444878 SIVA1O15304 175 aa9.94□□□□□ -0.82
RBM39-216ENST00000444878 C1orf158Q8N1D5 194 aa9.94□□□□□ -0.82
RBM39-216ENST00000444878 EDA2RQ9HAV5 297 aa9.94□□□□□ -0.82
RBM39-216ENST00000444878 IGIPA6NJ69 53 aa9.94□□□□□ -0.82
RBM39-216ENST00000444878 KRTAP10-3P60369 221 aa9.94□□□□□ -0.82
RBM39-216ENST00000444878 RHOHQ15669 191 aa9.94□□□□□ -0.82
RBM39-216ENST00000444878 CFAP126Q5VTH2 177 aa9.94□□□□□ -0.82
RBM39-216ENST00000444878 MRPL16Q9NX20 251 aaKnown RBP9.94□□□□□ -0.82
RBM39-216ENST00000444878 AZU1P20160 251 aa9.93□□□□□ -0.82
RBM39-216ENST00000444878 UFSP1Q6NVU6 142 aa9.93□□□□□ -0.82
RBM39-216ENST00000444878 TMEM141Q96I45 108 aa9.93□□□□□ -0.82
RBM39-216ENST00000444878 TIMM17AQ99595 171 aa9.93□□□□□ -0.82
RBM39-216ENST00000444878 RHODO00212 210 aa9.92□□□□□ -0.82
RBM39-216ENST00000444878 TSHBP01222 138 aa9.92□□□□□ -0.82
RBM39-216ENST00000444878 P0DMU3 169 aa9.92□□□□□ -0.82
RBM39-216ENST00000444878 FAM231AP0DMU4 169 aa9.92□□□□□ -0.82
RBM39-216ENST00000444878 FAM231CP0DMU5 169 aa9.92□□□□□ -0.82
RBM39-216ENST00000444878 BEAN1Q3B7T3 259 aa9.92□□□□□ -0.82
RBM39-216ENST00000444878 TMEM97Q5BJF2 176 aa9.92□□□□□ -0.82
RBM39-216ENST00000444878 TTTY13Q9BZ97 58 aa9.92□□□□□ -0.82
RBM39-216ENST00000444878 WFDC10AQ9H1F0 79 aa9.92□□□□□ -0.82
RBM39-216ENST00000444878 HERV-K104P63124 156 aa9.91□□□□□ -0.82
RBM39-216ENST00000444878 PMVKQ15126 192 aa9.91□□□□□ -0.82
RBM39-216ENST00000444878 HIVEP1P15822 2718 aa9.91□□□□□ -0.82
RBM39-216ENST00000444878 C19orf73Q9NVV2 129 aa9.91□□□□□ -0.82
RBM39-216ENST00000444878 TRAV8-6A0A0B4J262 113 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms