RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CITED1Q99966 193 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 C20orf78Q9BR46 151 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 DPH3P1Q9H4G8 78 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 PLXNB1O43157 2135 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 RP1L1Q8IWN7 2480 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 PIEZO2Q9H5I5 2752 aa2.48□□□□□ -2.01
HMGB3P11-201ENST00000440127 ANKHD1Q8IWZ3 2542 aaKnown RBP2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 WDFY4Q6ZS81 3184 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 PCNX1Q96RV3 2341 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 IGLV4-3A0A075B6K6 122 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 TRAV26-2A0A0B4J265 109 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 TRAV12-3A0A0B4J271 114 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 TEX48A0A1B0GUV7 120 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 C7orf71A4D174 169 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 LINC01619G3V211 115 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 K7EMI3 77 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 SIVA1O15304 175 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 RS1O15537 224 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 DLEU1O43261 78 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 CD5LO43866 347 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 MGPP08493 103 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 ZNF688P0C7X2 276 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 RNASE3P12724 160 aaKnown RBP2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 SYNJ2BPP57105 145 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 HIGD2BQ4VC39 106 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 MPV17L2Q567V2 206 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 FOXI2Q6ZQN5 318 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 BOD1L2Q8IYS8 172 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 Q8N2B8 174 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 TMEM86BQ8N661 226 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 C14orf178Q8N769 122 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 POM121L12Q8N7R1 296 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 ORAOV1Q8WV07 137 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 C18orf15Q96N68 181 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 AP1S3Q96PC3 154 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 FOXC2Q99958 501 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 TMEM208Q9BTX3 173 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 SMIM2Q9BVW6 85 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 CHTOPQ9Y3Y2 248 aaKnown RBP2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 ZFHX4Q86UP3 3567 aa2.47□□□□□ -2.01
HMGB3P11-201ENST00000440127 TLN1Q9Y490 2541 aaKnown RBP2.46□□□□□ -2.01
HMGB3P11-201ENST00000440127 IGHV1OR15-1A0A075B7D0 117 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 A0A087WX48 190 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 TRAV2A0A0B4J234 112 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 IGHV3-16A0A0C4DH30 117 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 LINC01549A6NIU2 74 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 DPM2O94777 84 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 IGKCP01834 107 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 CD7P09564 240 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 FGF6P10767 208 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 RPL13AP40429 203 aaKnown RBP2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 CDKN1BP46527 198 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 RPL32P62910 135 aaKnown RBP2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 TMEM97Q5BJF2 176 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 BVES-AS1Q5T3Y7 98 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 C2orf91Q6ZV80 131 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 OR11H1Q8NG94 326 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 OR9G4Q8NGQ1 327 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 RPL39LQ96EH5 51 aaKnown RBP2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 C9orf85Q96MD7 179 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 SCGB3A1Q96QR1 104 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 PRR34Q9NV39 138 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 HHLA3Q9XRX5 114 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 CSDC2Q9Y534 153 aaKnown RBP2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 KIF25-AS1Q9Y6Z4 181 aa2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 MAP1BP46821 2468 aaKnown RBP2.46□□□□□ -2.02
HMGB3P11-201ENST00000440127 ABCA4P78363 2273 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 MGAQ8IWI9 3026 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 CEP295Q9C0D2 2601 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 DSPP15924 2871 aaKnown RBP2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 IGF2RP11717 2491 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 AGRNO00468 2067 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 TRAV12-2A0A075B6T6 113 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 TRAV12-1A0A0B4J245 112 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 TRBV6-5A0A0K0K1A5 114 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 A8MU10 97 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 EPM2AB3EWF7 344 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 H7C1H1 209 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 NMUP48645 174 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 POLR2KP53803 58 aaKnown RBP2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 LINC00315P59091 139 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 SEC11AP67812 179 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 HSD52Q0P140 79 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 SPINK13Q1W4C9 94 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 REG3GQ6UW15 175 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 AMTNQ6UX39 209 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 C2orf66Q6UXQ4 117 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 Q8NBF4 154 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 WFDC11Q8NEX6 87 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 C4orf3Q8WVX3 66 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 TOMM6Q96B49 74 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 PPDPFQ9H3Y8 114 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 JPT2Q9H910 190 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 MRPL35Q9NZE8 188 aaKnown RBP2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 HIGD1BQ9P298 99 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 TP73-AS1Q9UF72 201 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 FRYQ5TBA9 3013 aa2.45□□□□□ -2.02
HMGB3P11-201ENST00000440127 SPTBN2O15020 2390 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms