RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ERASQ7Z444 233 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 GTSCR1Q86UQ5 136 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 TMEM141Q96I45 108 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 CLUHP3Q96NS8 147 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 RHPN1-AS1Q9BWJ2 59 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 TM2D2Q9BX73 214 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 NACAE9PAV3 2078 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 HUWE1Q7Z6Z7 4374 aaKnown RBP3.51□□□□□ -1.85
EDEM3-203ENST00000439962 OR11H12B2RN74 326 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 CRYBA4P53673 196 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 ANKRD39Q53RE8 183 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 ZFAND6Q6FIF0 208 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 SYT8Q8NBV8 401 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 DCANP1Q8TF63 244 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 C20orf173Q96LM9 149 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 MCRIP2Q9BUT9 160 aaKnown RBP3.51□□□□□ -1.85
EDEM3-203ENST00000439962 PHLDA3Q9Y5J5 127 aa3.51□□□□□ -1.85
EDEM3-203ENST00000439962 DEFB4AO15263 64 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 CCL25O15444 150 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 SNRPD3P62318 126 aaKnown RBP3.5□□□□□ -1.85
EDEM3-203ENST00000439962 RHOHQ15669 191 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 C9orf85Q96MD7 179 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 TIMM17AQ99595 171 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 MSRB1Q9NZV6 116 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 PEMTQ9UBM1 199 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 MUC21A0A0G2JKD1 596 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 MUC21A0A140T8X8 626 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 CBY3A6NI87 242 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 PRSS1P07477 247 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 S100A4P26447 101 aaKnown RBP3.5□□□□□ -1.85
EDEM3-203ENST00000439962 MUC21Q5SSG8 566 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 OR4C5Q8NGB2 326 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 KIF25-AS1Q9Y6Z4 181 aa3.5□□□□□ -1.85
EDEM3-203ENST00000439962 TRGV11A0A075B6L2 103 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 SMKR1H3BMG3 65 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 H3BVH4 76 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 K7EQG2 157 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 RNASE3P12724 160 aaKnown RBP3.49□□□□□ -1.85
EDEM3-203ENST00000439962 CDKN1BP46527 198 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 VAMP3Q15836 100 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 ANXA2RQ3ZCQ2 193 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 IGFL4Q6B9Z1 124 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 UFSP1Q6NVU6 142 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 FAM159AQ6UWV7 190 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 FOXI2Q6ZQN5 318 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 NEXN-AS1Q8NBZ9 246 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 RASL10AQ92737 203 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 A0A1B0GWB2 263 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 VCYO14598 125 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 SMIM13P0DJ93 91 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 DEFB114Q30KQ6 69 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 PRR9Q5T870 116 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 IGHV3OR16-12A0A075B7B8 117 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 A0A0J9YX75 114 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 TRBV27A0A0K0K1C4 114 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 E9PLD3 99 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 K7EP34 96 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 IGLV1-51P01701 117 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 ZNF688P0C7X2 276 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 POLR2KP53803 58 aaKnown RBP3.49□□□□□ -1.85
EDEM3-203ENST00000439962 FXYD7P58549 80 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 DEFB135Q30KP9 77 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 DKK2Q9UBU2 259 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 CYSLTR1Q9Y271 337 aa3.49□□□□□ -1.85
EDEM3-203ENST00000439962 LINC00315P59091 139 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 HERVK_113P61574 105 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 EGFEM1PQ0D2K5 195 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 CFAP161Q6P656 301 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 TRPT1Q86TN4 253 aaKnown RBP3.48□□□□□ -1.85
EDEM3-203ENST00000439962 CEND1Q8N111 149 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 SCGB3A1Q96QR1 104 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 CHAC1Q9BUX1 264 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 CHTOPQ9Y3Y2 248 aaKnown RBP3.48□□□□□ -1.85
EDEM3-203ENST00000439962 TRAV25A0A0B4J276 109 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 H0Y8G0 127 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 K7ERU9 68 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 HTN1P15515 57 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 RNASE4P34096 147 aaKnown RBP3.48□□□□□ -1.85
EDEM3-203ENST00000439962 ZC2HC1BQ5TFG8 222 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 KIR2DL4Q99706 377 aa3.48□□□□□ -1.85
EDEM3-203ENST00000439962 SPAG8Q99932 426 aaPredicted RBP3.48□□□□□ -1.85
EDEM3-203ENST00000439962 SPANXB1Q9NS25 103 aaPredicted RBP3.48□□□□□ -1.85
EDEM3-203ENST00000439962 TRBV25-1A0A075B6N4 114 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 IGHV3-16A0A0C4DH30 117 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 A0A1W2PPM0 123 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 GAGE10A6NGK3 116 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 C11orf86A6NJI1 115 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 KNCNA6PVL3 124 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 J3KRW8 73 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 NMUP48645 174 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 EMP1P54849 157 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 CMC4P56277 68 aaPredicted RBP3.47□□□□□ -1.85
EDEM3-203ENST00000439962 DEFB131AP59861 70 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 C2orf66Q6UXQ4 117 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 OR11H2Q8NH07 326 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 MRPL35Q9NZE8 188 aaKnown RBP3.47□□□□□ -1.85
EDEM3-203ENST00000439962 TP73-AS1Q9UF72 201 aa3.47□□□□□ -1.85
EDEM3-203ENST00000439962 IGHV1OR15-1A0A075B7D0 117 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms