RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 SVIPQ8NHG7 77 aa9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 NDUFV3P56181 108 aaKnown RBP9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 HERV-K104P63124 156 aa9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 VCX2Q9H322 139 aa9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 UTP20O75691 2785 aaKnown RBP9.31□□□□□ -0.92
SLC38A1-202ENST00000439706 IGIPA6NJ69 53 aa9.3□□□□□ -0.92
SLC38A1-202ENST00000439706 IGHV3-33P01772 117 aa9.3□□□□□ -0.92
SLC38A1-202ENST00000439706 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
SLC38A1-202ENST00000439706 M0R1W7 72 aa9.3□□□□□ -0.92
SLC38A1-202ENST00000439706 NHLRC4P0CG21 123 aaPredicted RBP9.3□□□□□ -0.92
SLC38A1-202ENST00000439706 C9orf139Q6ZV77 190 aa9.3□□□□□ -0.92
SLC38A1-202ENST00000439706 MYO18BQ8IUG5 2567 aa9.3□□□□□ -0.92
SLC38A1-202ENST00000439706 FOXC1Q12948 553 aa9.3□□□□□ -0.92
SLC38A1-202ENST00000439706 Q8N6K4 173 aa9.3□□□□□ -0.92
SLC38A1-202ENST00000439706 CHCHD5Q9BSY4 110 aa9.3□□□□□ -0.92
SLC38A1-202ENST00000439706 GAGE12JA6NER3 117 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 GAGE7O76087 117 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 GAGE12FP0CL80 117 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 GAGE12GP0CL81 117 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 GAGE12IP0CL82 117 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 IFITM1P13164 125 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 PROK1P58294 105 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 GAGE4Q13068 117 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 TMEM95Q3KNT9 176 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 BPESC1Q9GZL8 116 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 BLCAPP62952 87 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 LINC01620Q4KN68 170 aa9.29□□□□□ -0.92
SLC38A1-202ENST00000439706 TRIAP1O43715 76 aa9.28□□□□□ -0.92
SLC38A1-202ENST00000439706 SHISA2Q6UWI4 295 aa9.28□□□□□ -0.92
SLC38A1-202ENST00000439706 IGHV4-4A0A075B6R2 117 aa9.28□□□□□ -0.92
SLC38A1-202ENST00000439706 TRBV7-1A0A0A6YYK4 115 aa9.28□□□□□ -0.92
SLC38A1-202ENST00000439706 IGHV3-38A0A0C4DH36 116 aa9.28□□□□□ -0.92
SLC38A1-202ENST00000439706 RS1O15537 224 aa9.28□□□□□ -0.92
SLC38A1-202ENST00000439706 UBE2E1P51965 193 aa9.28□□□□□ -0.92
SLC38A1-202ENST00000439706 CCDC168Q8NDH2 2452 aa9.28□□□□□ -0.92
SLC38A1-202ENST00000439706 MINOS1Q5TGZ0 78 aa9.28□□□□□ -0.92
SLC38A1-202ENST00000439706 Q9UF83 564 aa9.28□□□□□ -0.92
SLC38A1-202ENST00000439706 CENPVL3A0A0U1RRI6 287 aa9.27□□□□□ -0.92
SLC38A1-202ENST00000439706 ATXN8Q156A1 80 aa9.27□□□□□ -0.93
SLC38A1-202ENST00000439706 EPG5Q9HCE0 2579 aa9.26□□□□□ -0.93
SLC38A1-202ENST00000439706 A0A1W2PPR1 153 aa9.26□□□□□ -0.93
SLC38A1-202ENST00000439706 OVOL1O14753 267 aa9.26□□□□□ -0.93
SLC38A1-202ENST00000439706 CD28P10747 220 aa9.26□□□□□ -0.93
SLC38A1-202ENST00000439706 MEIG1Q5JSS6 88 aa9.26□□□□□ -0.93
SLC38A1-202ENST00000439706 FN1P02751 2386 aaKnown RBP9.26□□□□□ -0.93
SLC38A1-202ENST00000439706 PAPPA-AS1Q5QFB9 102 aa9.26□□□□□ -0.93
SLC38A1-202ENST00000439706 ADAMTSL4-AS1Q5T5F5 129 aa9.26□□□□□ -0.93
SLC38A1-202ENST00000439706 HIST2H2BDQ6DRA6 164 aa9.26□□□□□ -0.93
SLC38A1-202ENST00000439706 H3BMM0 161 aa9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 POLR2KP53803 58 aaKnown RBP9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 TMEM263Q8WUH6 116 aaKnown RBP9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 TMEM190Q8WZ59 177 aa9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 UBE2WQ96B02 151 aa9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 NAV2Q8IVL1 2488 aa9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 NIPBLQ6KC79 2804 aaeCLIP9.25□□□□□ -0.935e-6■■■■■ 32.2
SLC38A1-202ENST00000439706 LINC00315P59091 139 aa9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 FBN2P35556 2912 aa9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 FLNCQ14315 2725 aa9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 NPFFO15130 113 aa9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 ZNF22P17026 224 aaPredicted RBP9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 ITLN2Q8WWU7 325 aaPredicted RBP9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 MINOS1-NBL1R4GNA1 71 aa9.25□□□□□ -0.93
SLC38A1-202ENST00000439706 RHODO00212 210 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 TIMM21Q9BVV7 248 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 ABCA12Q86UK0 2595 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 IGHV3-16A0A0C4DH30 117 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 A0A0J9YXY3 114 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 LINC01619G3V211 115 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 IGHV3-30-3P0DP02 117 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 C5orf56Q8N8D9 126 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 PPP1R17O96001 155 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 C10orf99Q6UWK7 81 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 AMELXQ99217 191 aa9.24□□□□□ -0.93
SLC38A1-202ENST00000439706 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
SLC38A1-202ENST00000439706 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
SLC38A1-202ENST00000439706 ZFYVE26Q68DK2 2539 aa9.23□□□□□ -0.93
SLC38A1-202ENST00000439706 TRBV7-9A0A0J9YWB2 115 aa9.23□□□□□ -0.93
SLC38A1-202ENST00000439706 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
SLC38A1-202ENST00000439706 CITED1Q99966 193 aa9.23□□□□□ -0.93
SLC38A1-202ENST00000439706 SIRPDQ9H106 197 aa9.23□□□□□ -0.93
SLC38A1-202ENST00000439706 H3BUX3 64 aa9.22□□□□□ -0.93
SLC38A1-202ENST00000439706 M0R2P5 195 aa9.22□□□□□ -0.93
SLC38A1-202ENST00000439706 TMEM141Q96I45 108 aa9.22□□□□□ -0.93
SLC38A1-202ENST00000439706 NDUFA12Q9UI09 145 aa9.22□□□□□ -0.93
SLC38A1-202ENST00000439706 KIF25-AS1Q9Y6Z4 181 aa9.22□□□□□ -0.93
SLC38A1-202ENST00000439706 TMEM223A0PJW6 202 aa9.22□□□□□ -0.93
SLC38A1-202ENST00000439706 IGF2-ASQ6U949 168 aa9.22□□□□□ -0.93
SLC38A1-202ENST00000439706 SYNJ2BPP57105 145 aa9.22□□□□□ -0.93
SLC38A1-202ENST00000439706 EBI3Q14213 229 aa9.22□□□□□ -0.93
SLC38A1-202ENST00000439706 COX6CP09669 75 aa9.21□□□□□ -0.93
SLC38A1-202ENST00000439706 RPL32P62910 135 aaKnown RBP9.21□□□□□ -0.93
SLC38A1-202ENST00000439706 LEPROTO15243 131 aa9.21□□□□□ -0.94
SLC38A1-202ENST00000439706 MRPL53Q96EL3 112 aaKnown RBP9.21□□□□□ -0.94
SLC38A1-202ENST00000439706 ICOSQ9Y6W8 199 aa9.21□□□□□ -0.94
SLC38A1-202ENST00000439706 H7C423 109 aa9.21□□□□□ -0.94
SLC38A1-202ENST00000439706 RPL13AP40429 203 aaKnown RBP9.21□□□□□ -0.94
SLC38A1-202ENST00000439706 TIMM17AQ99595 171 aa9.21□□□□□ -0.94
SLC38A1-202ENST00000439706 U3KQE9 123 aa9.21□□□□□ -0.94
SLC38A1-202ENST00000439706 CHD6Q8TD26 2715 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms