RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IGKCP01834 107 aa18.73■□□□□ 0.59
CPNE1-216ENST00000437340 BEAN1Q3B7T3 259 aa18.73■□□□□ 0.59
CPNE1-216ENST00000437340 A0A087WX48 190 aa18.72■□□□□ 0.59
CPNE1-216ENST00000437340 H7C1H1 209 aa18.72■□□□□ 0.59
CPNE1-216ENST00000437340 MORN3Q6PF18 240 aaPredicted RBP18.72■□□□□ 0.59
CPNE1-216ENST00000437340 STPG4Q8N801 248 aa18.72■□□□□ 0.59
CPNE1-216ENST00000437340 XCL2Q9UBD3 114 aa18.72■□□□□ 0.59
CPNE1-216ENST00000437340 ZFP2Q6ZN57 461 aa18.7■□□□□ 0.58
CPNE1-216ENST00000437340 ERASQ7Z444 233 aa18.7■□□□□ 0.58
CPNE1-216ENST00000437340 HHLA3Q9XRX5 114 aa18.7■□□□□ 0.58
CPNE1-216ENST00000437340 CYSLTR1Q9Y271 337 aa18.7■□□□□ 0.58
CPNE1-216ENST00000437340 BATFQ16520 125 aa18.7■□□□□ 0.58
CPNE1-216ENST00000437340 UFSP1Q6NVU6 142 aa18.7■□□□□ 0.58
CPNE1-216ENST00000437340 NEGR1Q7Z3B1 354 aa18.7■□□□□ 0.58
CPNE1-216ENST00000437340 PRM2P04554 102 aa18.69■□□□□ 0.58
CPNE1-216ENST00000437340 TMEM208Q9BTX3 173 aa18.69■□□□□ 0.58
CPNE1-216ENST00000437340 RIPPLY3P57055 190 aa18.68■□□□□ 0.58
CPNE1-216ENST00000437340 C1orf158Q8N1D5 194 aa18.68■□□□□ 0.58
CPNE1-216ENST00000437340 COL5A1-AS1Q5SY13 56 aa18.68■□□□□ 0.58
CPNE1-216ENST00000437340 C19orf73Q9NVV2 129 aa18.68■□□□□ 0.58
CPNE1-216ENST00000437340 MRPL35Q9NZE8 188 aaKnown RBP18.68■□□□□ 0.58
CPNE1-216ENST00000437340 PF4P02776 101 aa18.67■□□□□ 0.58
CPNE1-216ENST00000437340 FGF6P10767 208 aa18.67■□□□□ 0.58
CPNE1-216ENST00000437340 NEXN-AS1Q8NBZ9 246 aa18.67■□□□□ 0.58
CPNE1-216ENST00000437340 TP73-AS1Q9UF72 201 aa18.67■□□□□ 0.58
CPNE1-216ENST00000437340 RHODO00212 210 aa18.66■□□□□ 0.58
CPNE1-216ENST00000437340 DLEU1O43261 78 aa18.66■□□□□ 0.58
CPNE1-216ENST00000437340 PLNP26678 52 aa18.66■□□□□ 0.58
CPNE1-216ENST00000437340 RHOHQ15669 191 aa18.66■□□□□ 0.58
CPNE1-216ENST00000437340 BOD1L2Q8IYS8 172 aa18.66■□□□□ 0.58
CPNE1-216ENST00000437340 LINC00482Q8N8I6 264 aa18.66■□□□□ 0.58
CPNE1-216ENST00000437340 F8VRH5 84 aa18.65■□□□□ 0.58
CPNE1-216ENST00000437340 CFAP126Q5VTH2 177 aa18.65■□□□□ 0.58
CPNE1-216ENST00000437340 IL17DQ8TAD2 202 aa18.64■□□□□ 0.57
CPNE1-216ENST00000437340 BAALCQ8WXS3 180 aa18.64■□□□□ 0.57
CPNE1-216ENST00000437340 TP53TG1Q9Y2A0 90 aa18.64■□□□□ 0.57
CPNE1-216ENST00000437340 HINT1P49773 126 aaPredicted RBP18.63■□□□□ 0.57
CPNE1-216ENST00000437340 I3L3M4 83 aa18.63■□□□□ 0.57
CPNE1-216ENST00000437340 TMEM141Q96I45 108 aa18.63■□□□□ 0.57
CPNE1-216ENST00000437340 TIMM17AQ99595 171 aa18.63■□□□□ 0.57
CPNE1-216ENST00000437340 IGIPA6NJ69 53 aa18.62■□□□□ 0.57
CPNE1-216ENST00000437340 CHTOPQ9Y3Y2 248 aaKnown RBP18.62■□□□□ 0.57
CPNE1-216ENST00000437340 TENM1Q9UKZ4 2725 aa18.62■□□□□ 0.57
CPNE1-216ENST00000437340 RS1O15537 224 aa18.61■□□□□ 0.57
CPNE1-216ENST00000437340 AZU1P20160 251 aa18.61■□□□□ 0.57
CPNE1-216ENST00000437340 KRTAP24-1Q3LI83 254 aa18.61■□□□□ 0.57
CPNE1-216ENST00000437340 ZC2HC1BQ5TFG8 222 aa18.61■□□□□ 0.57
CPNE1-216ENST00000437340 C12orf54Q6X4T0 127 aa18.61■□□□□ 0.57
CPNE1-216ENST00000437340 C2orf91Q6ZV80 131 aa18.61■□□□□ 0.57
CPNE1-216ENST00000437340 SIVA1O15304 175 aa18.6■□□□□ 0.57
CPNE1-216ENST00000437340 PRIMA1Q86XR5 153 aa18.6■□□□□ 0.57
CPNE1-216ENST00000437340 RNASE8Q8TDE3 154 aaKnown RBP18.6■□□□□ 0.57
CPNE1-216ENST00000437340 C1QTNF4Q9BXJ3 329 aa18.6■□□□□ 0.57
CPNE1-216ENST00000437340 TSHBP01222 138 aa18.6■□□□□ 0.57
CPNE1-216ENST00000437340 GIG44P09565 113 aaPredicted RBP18.6■□□□□ 0.57
CPNE1-216ENST00000437340 NMUP48645 174 aa18.6■□□□□ 0.57
CPNE1-216ENST00000437340 TMEM263Q8WUH6 116 aaKnown RBP18.6■□□□□ 0.57
CPNE1-216ENST00000437340 MRPL16Q9NX20 251 aaKnown RBP18.6■□□□□ 0.57
CPNE1-216ENST00000437340 IGHV3OR16-12A0A075B7B8 117 aa18.59■□□□□ 0.57
CPNE1-216ENST00000437340 IGHV3-73A0A0B4J1V6 119 aa18.59■□□□□ 0.57
CPNE1-216ENST00000437340 PRSS29PA6NIE9 313 aa18.58■□□□□ 0.57
CPNE1-216ENST00000437340 MPV17L2Q567V2 206 aa18.58■□□□□ 0.57
CPNE1-216ENST00000437340 IGHV3-53P01767 116 aa18.58■□□□□ 0.56
CPNE1-216ENST00000437340 WFDC10AQ9H1F0 79 aa18.58■□□□□ 0.56
CPNE1-216ENST00000437340 ATRQ13535 2644 aa18.58■□□□□ 0.56
CPNE1-216ENST00000437340 INSL3P51460 131 aa18.57■□□□□ 0.56
CPNE1-216ENST00000437340 RPL39P62891 51 aaKnown RBP18.57■□□□□ 0.56
CPNE1-216ENST00000437340 GTSCR1Q86UQ5 136 aa18.57■□□□□ 0.56
CPNE1-216ENST00000437340 CITED1Q99966 193 aa18.57■□□□□ 0.56
CPNE1-216ENST00000437340 TNFRSF18Q9Y5U5 241 aa18.57■□□□□ 0.56
CPNE1-216ENST00000437340 PCP2Q8IVA1 136 aa18.56■□□□□ 0.56
CPNE1-216ENST00000437340 DNAJC30Q96LL9 226 aa18.56■□□□□ 0.56
CPNE1-216ENST00000437340 TCTAP57738 103 aa18.55■□□□□ 0.56
CPNE1-216ENST00000437340 IGKV2D-26A0A0A0MRZ7 120 aa18.55■□□□□ 0.56
CPNE1-216ENST00000437340 BVES-AS1Q5T3Y7 98 aa18.55■□□□□ 0.56
CPNE1-216ENST00000437340 C20orf203Q8NBC4 194 aa18.55■□□□□ 0.56
CPNE1-216ENST00000437340 P0DMU3 169 aa18.54■□□□□ 0.56
CPNE1-216ENST00000437340 FAM231AP0DMU4 169 aa18.54■□□□□ 0.56
CPNE1-216ENST00000437340 FAM231CP0DMU5 169 aa18.54■□□□□ 0.56
CPNE1-216ENST00000437340 PMVKQ15126 192 aa18.54■□□□□ 0.56
CPNE1-216ENST00000437340 NACAE9PAV3 2078 aa18.53■□□□□ 0.56
CPNE1-216ENST00000437340 RPL35AP18077 110 aaKnown RBP18.53■□□□□ 0.56
CPNE1-216ENST00000437340 Q6ZSN1 163 aa18.53■□□□□ 0.56
CPNE1-216ENST00000437340 DEFB104AQ8WTQ1 72 aa18.53■□□□□ 0.56
CPNE1-216ENST00000437340 PAPPA-AS1Q5QFB9 102 aa18.53■□□□□ 0.56
CPNE1-216ENST00000437340 CSNK1G2-AS1Q8NCQ2 148 aa18.53■□□□□ 0.56
CPNE1-216ENST00000437340 DAZ2Q13117 558 aaKnown RBP18.52■□□□□ 0.55
CPNE1-216ENST00000437340 C16orf74Q96GX8 76 aa18.52■□□□□ 0.55
CPNE1-216ENST00000437340 TRGV1A0A0A0MS02 117 aa18.51■□□□□ 0.55
CPNE1-216ENST00000437340 TMEM97Q5BJF2 176 aa18.5■□□□□ 0.55
CPNE1-216ENST00000437340 C9orf66Q5T8R8 295 aa18.5■□□□□ 0.55
CPNE1-216ENST00000437340 OR4C5Q8NGB2 326 aa18.5■□□□□ 0.55
CPNE1-216ENST00000437340 CST9LQ9H4G1 147 aa18.5■□□□□ 0.55
CPNE1-216ENST00000437340 HIGD1BQ9P298 99 aa18.5■□□□□ 0.55
CPNE1-216ENST00000437340 FBN1P35555 2871 aaKnown RBP18.5■□□□□ 0.55
CPNE1-216ENST00000437340 TRAV4A0A0B4J268 109 aa18.47■□□□□ 0.55
CPNE1-216ENST00000437340 HSD52Q0P140 79 aa18.47■□□□□ 0.55
CPNE1-216ENST00000437340 PYGO1Q9Y3Y4 419 aa18.47■□□□□ 0.55
CPNE1-216ENST00000437340 IGLV4-69A0A075B6H9 119 aa18.46■□□□□ 0.55
CPNE1-216ENST00000437340 PLAC8L1A1L4L8 177 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms