RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RHODO00212 210 aa4.97□□□□□ -1.61
LSM3P3-201ENST00000436601 IGHV3-53P01767 116 aa4.97□□□□□ -1.61
LSM3P3-201ENST00000436601 MGPP08493 103 aa4.97□□□□□ -1.61
LSM3P3-201ENST00000436601 SPART-AS1P0CW21 52 aa4.97□□□□□ -1.61
LSM3P3-201ENST00000436601 SMIM17P0DL12 118 aa4.97□□□□□ -1.61
LSM3P3-201ENST00000436601 FAM74A4Q5TZK3 123 aa4.97□□□□□ -1.61
LSM3P3-201ENST00000436601 OR4C5Q8NGB2 326 aa4.97□□□□□ -1.61
LSM3P3-201ENST00000436601 ALKBH7Q9BT30 221 aaPredicted RBP4.97□□□□□ -1.61
LSM3P3-201ENST00000436601 C11orf68Q9H3H3 251 aaKnown RBP4.97□□□□□ -1.61
LSM3P3-201ENST00000436601 C1orf196B1AJZ1 125 aa4.96□□□□□ -1.62
LSM3P3-201ENST00000436601 D6R8Y8 96 aa4.96□□□□□ -1.62
LSM3P3-201ENST00000436601 M0QY20 66 aa4.96□□□□□ -1.62
LSM3P3-201ENST00000436601 NCR2O95944 276 aa4.96□□□□□ -1.62
LSM3P3-201ENST00000436601 GATA1P15976 413 aaPredicted RBP4.96□□□□□ -1.62
LSM3P3-201ENST00000436601 FHL2Q14192 279 aa4.96□□□□□ -1.62
LSM3P3-201ENST00000436601 C12orf74Q32Q52 190 aa4.96□□□□□ -1.62
LSM3P3-201ENST00000436601 ZFP2Q6ZN57 461 aa4.96□□□□□ -1.62
LSM3P3-201ENST00000436601 MRAP2Q96G30 205 aa4.96□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST1H2BKO60814 126 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 NPYP01303 97 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 PPBPP02775 128 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST1H2BJP06899 126 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 NHLRC4P0CG21 123 aaPredicted RBP4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST1H2BOP23527 126 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 SRIP30626 198 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 CKS2P33552 79 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST1H2BBP33778 126 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST1H2BDP58876 126 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 DAD1P61803 113 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST1H2BCP62807 126 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 ZNF56Q15929 161 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST2H2BEQ16778 126 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 ORMDL3Q8N138 153 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 NRACQ8N912 160 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST1H2BHQ93079 126 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST1H2BNQ99877 126 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 HIST1H2BMQ99879 126 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 Q9UF83 564 aa4.95□□□□□ -1.62
LSM3P3-201ENST00000436601 MGAM2Q2M2H8 2515 aa4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 TEX48A0A1B0GUV7 120 aa4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 CIDEAO60543 219 aa4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 P0DMU3 169 aa4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 FAM231AP0DMU4 169 aa4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 FAM231CP0DMU5 169 aa4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 SLC25A29Q8N8R3 303 aa4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 C11orf45Q8TAV5 145 aa4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 RPL39LQ96EH5 51 aaKnown RBP4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 PRELID3AQ96N28 172 aa4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 EDA2RQ9HAV5 297 aa4.94□□□□□ -1.62
LSM3P3-201ENST00000436601 TRGV4A0A0C4DH28 118 aa4.93□□□□□ -1.62
LSM3P3-201ENST00000436601 TRBV6-4A0A1B0GX49 114 aa4.93□□□□□ -1.62
LSM3P3-201ENST00000436601 ATP5G1P05496 136 aa4.93□□□□□ -1.62
LSM3P3-201ENST00000436601 NANOS2P60321 138 aaKnown RBP4.93□□□□□ -1.62
LSM3P3-201ENST00000436601 RAB5BP61020 215 aa4.93□□□□□ -1.62
LSM3P3-201ENST00000436601 Q0VG73 95 aa4.93□□□□□ -1.62
LSM3P3-201ENST00000436601 IQCJQ1A5X6 159 aa4.93□□□□□ -1.62
LSM3P3-201ENST00000436601 C18orf32Q8TCD1 76 aa4.93□□□□□ -1.62
LSM3P3-201ENST00000436601 HHLA3Q9XRX5 114 aa4.93□□□□□ -1.62
LSM3P3-201ENST00000436601 LAMTOR2Q9Y2Q5 125 aa4.93□□□□□ -1.62
LSM3P3-201ENST00000436601 TRBV6-5A0A0K0K1A5 114 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 LOC100131303A0A0U1RQF7 123 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 LOC389332A0A1B0GUA5 103 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 H7C1H1 209 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 PPP1R17O96001 155 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 HTN3P15516 51 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 CRYBA4P53673 196 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 OR10J3Q5JRS4 329 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 Q6ZTC4 211 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 NEXN-AS1Q8NBZ9 246 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 URB1-AS1Q96HZ7 61 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 VSIG2Q96IQ7 327 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 C20orf78Q9BR46 151 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 NIT2Q9NQR4 276 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 MUC4Q99102 2169 aa4.92□□□□□ -1.62
LSM3P3-201ENST00000436601 NOTCH1P46531 2555 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 IGLV2-18A0A075B6J9 118 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 TRBV10-1A0A0K0K1A3 114 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 F5H768 121 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 K7EQD1 137 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 NUPR1O60356 82 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 IFI27P40305 119 aaPredicted RBP4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 POLR2KP53803 58 aaKnown RBP4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 NDUFA6P56556 154 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 COA6Q5JTJ3 125 aaKnown RBP4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 NIT1Q86X76 327 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 DNAJC30Q96LL9 226 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 MAP1LC3AQ9H492 121 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 ST20Q9HBF5 79 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 PRO0255Q9UI72 69 aa4.91□□□□□ -1.62
LSM3P3-201ENST00000436601 NBEAL1Q6ZS30 2694 aa4.9□□□□□ -1.62
LSM3P3-201ENST00000436601 CMYA5Q8N3K9 4069 aa4.9□□□□□ -1.62
LSM3P3-201ENST00000436601 TRBV7-3A0A075B6L6 115 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 TRAV26-1A0A087WT03 109 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 A0A0J9YY99 117 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 TRBV27A0A0K0K1C4 114 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 GAGE12JA6NER3 117 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 SDHAF1A6NFY7 115 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 LINC01546A6NGU7 62 aa4.9□□□□□ -1.63
LSM3P3-201ENST00000436601 LINC00694P0DN24 101 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms