RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 PPP1R17O96001 155 aa16.23■□□□□ 0.19
SMARCAL1-208ENST00000434435 KIAA1644Q3SXP7 199 aa16.23■□□□□ 0.19
SMARCAL1-208ENST00000434435 OR10J3Q5JRS4 329 aa16.23■□□□□ 0.19
SMARCAL1-208ENST00000434435 CEMP1Q6PRD7 247 aaPredicted RBP16.23■□□□□ 0.19
SMARCAL1-208ENST00000434435 NEXN-AS1Q8NBZ9 246 aa16.23■□□□□ 0.19
SMARCAL1-208ENST00000434435 RPL39LQ96EH5 51 aaKnown RBP16.23■□□□□ 0.19
SMARCAL1-208ENST00000434435 NIT2Q9NQR4 276 aa16.23■□□□□ 0.19
SMARCAL1-208ENST00000434435 GAS8-AS1O95177 125 aa16.22■□□□□ 0.19
SMARCAL1-208ENST00000434435 RPL36AP83881 106 aaKnown RBP16.22■□□□□ 0.19
SMARCAL1-208ENST00000434435 MUC7Q8TAX7 377 aa16.22■□□□□ 0.19
SMARCAL1-208ENST00000434435 RPL36ALQ969Q0 106 aaKnown RBP16.22■□□□□ 0.19
SMARCAL1-208ENST00000434435 DNAJC30Q96LL9 226 aa16.22■□□□□ 0.19
SMARCAL1-208ENST00000434435 ICOSQ9Y6W8 199 aa16.22■□□□□ 0.19
SMARCAL1-208ENST00000434435 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.21■□□□□ 0.19
SMARCAL1-208ENST00000434435 PRELID3AQ96N28 172 aa16.21■□□□□ 0.19
SMARCAL1-208ENST00000434435 KLK5Q9Y337 293 aaPredicted RBP16.21■□□□□ 0.19
SMARCAL1-208ENST00000434435 TNFRSF18Q9Y5U5 241 aa16.21■□□□□ 0.19
SMARCAL1-208ENST00000434435 GAGE12JA6NER3 117 aa16.2■□□□□ 0.18
SMARCAL1-208ENST00000434435 IGLL5B9A064 214 aa16.2■□□□□ 0.18
SMARCAL1-208ENST00000434435 GAGE1Q13065 139 aa16.2■□□□□ 0.18
SMARCAL1-208ENST00000434435 GAGE4Q13068 117 aa16.2■□□□□ 0.18
SMARCAL1-208ENST00000434435 GAGE5Q13069 117 aa16.2■□□□□ 0.18
SMARCAL1-208ENST00000434435 GAGE13Q4V321 117 aa16.2■□□□□ 0.18
SMARCAL1-208ENST00000434435 NRACQ8N912 160 aa16.2■□□□□ 0.18
SMARCAL1-208ENST00000434435 C15orf53Q8NAA6 179 aa16.2■□□□□ 0.18
SMARCAL1-208ENST00000434435 Q9UF83 564 aa16.2■□□□□ 0.18
SMARCAL1-208ENST00000434435 LAMTOR2Q9Y2Q5 125 aa16.2■□□□□ 0.18
SMARCAL1-208ENST00000434435 TRBV7-3A0A075B6L6 115 aa16.19■□□□□ 0.18
SMARCAL1-208ENST00000434435 MRPL23Q16540 153 aaKnown RBP16.19■□□□□ 0.18
SMARCAL1-208ENST00000434435 ZNRF2Q8NHG8 242 aa16.19■□□□□ 0.18
SMARCAL1-208ENST00000434435 TRBV6-5A0A0K0K1A5 114 aa16.18■□□□□ 0.18
SMARCAL1-208ENST00000434435 PHOX2AO14813 284 aa16.18■□□□□ 0.18
SMARCAL1-208ENST00000434435 TNFRSF6BO95407 300 aa16.18■□□□□ 0.18
SMARCAL1-208ENST00000434435 NPYP01303 97 aa16.18■□□□□ 0.18
SMARCAL1-208ENST00000434435 LINC00694P0DN24 101 aa16.18■□□□□ 0.18
SMARCAL1-208ENST00000434435 SRIP30626 198 aa16.18■□□□□ 0.18
SMARCAL1-208ENST00000434435 NUDT3O95989 172 aa16.17■□□□□ 0.18
SMARCAL1-208ENST00000434435 TRGC2P03986 189 aa16.17■□□□□ 0.18
SMARCAL1-208ENST00000434435 ZFAND6Q6FIF0 208 aa16.17■□□□□ 0.18
SMARCAL1-208ENST00000434435 ST20Q9HBF5 79 aa16.17■□□□□ 0.18
SMARCAL1-208ENST00000434435 A0A096LPF7 62 aa16.16■□□□□ 0.18
SMARCAL1-208ENST00000434435 UBE2D3P61077 147 aa16.16■□□□□ 0.18
SMARCAL1-208ENST00000434435 UBE2D2P62837 147 aa16.16■□□□□ 0.18
SMARCAL1-208ENST00000434435 ALKBH7Q9BT30 221 aaPredicted RBP16.16■□□□□ 0.18
SMARCAL1-208ENST00000434435 SUMO2P61956 95 aaKnown RBP16.15■□□□□ 0.18
SMARCAL1-208ENST00000434435 SH2D6Q7Z4S9 175 aa16.15■□□□□ 0.18
SMARCAL1-208ENST00000434435 C20orf78Q9BR46 151 aa16.14■□□□□ 0.17
SMARCAL1-208ENST00000434435 MAP1LC3AQ9H492 121 aa16.14■□□□□ 0.17
SMARCAL1-208ENST00000434435 SDHAF1A6NFY7 115 aa16.13■□□□□ 0.17
SMARCAL1-208ENST00000434435 NEGR1Q7Z3B1 354 aa16.13■□□□□ 0.17
SMARCAL1-208ENST00000434435 ATP6V0E2Q8NHE4 81 aa16.13■□□□□ 0.17
SMARCAL1-208ENST00000434435 TCTAP57738 103 aa16.12■□□□□ 0.17
SMARCAL1-208ENST00000434435 DAZ4Q86SG3 579 aaKnown RBP16.12■□□□□ 0.17
SMARCAL1-208ENST00000434435 TMEM70Q9BUB7 260 aa16.12■□□□□ 0.17
SMARCAL1-208ENST00000434435 DAZ3Q9NR90 486 aaKnown RBP16.12■□□□□ 0.17
SMARCAL1-208ENST00000434435 DYNC2H1Q8NCM8 4307 aaKnown RBP16.1■□□□□ 0.17
SMARCAL1-208ENST00000434435 IGHV3-38A0A0C4DH36 116 aa16.1■□□□□ 0.17
SMARCAL1-208ENST00000434435 POLR2KP53803 58 aaKnown RBP16.1■□□□□ 0.17
SMARCAL1-208ENST00000434435 RPL32P62910 135 aaKnown RBP16.1■□□□□ 0.17
SMARCAL1-208ENST00000434435 SMIM2Q9BVW6 85 aa16.1■□□□□ 0.17
SMARCAL1-208ENST00000434435 CSMD3Q7Z407 3707 aa16.09■□□□□ 0.17
SMARCAL1-208ENST00000434435 C3orf84H3BNL1 204 aa16.09■□□□□ 0.17
SMARCAL1-208ENST00000434435 APLNQ9ULZ1 77 aa16.09■□□□□ 0.17
SMARCAL1-208ENST00000434435 TRBV27A0A0K0K1C4 114 aa16.08■□□□□ 0.16
SMARCAL1-208ENST00000434435 LOC389332A0A1B0GUA5 103 aa16.08■□□□□ 0.16
SMARCAL1-208ENST00000434435 PRSS47A8MTI9 375 aa16.08■□□□□ 0.16
SMARCAL1-208ENST00000434435 VCYO14598 125 aa16.08■□□□□ 0.16
SMARCAL1-208ENST00000434435 PMCHP20382 165 aa16.08■□□□□ 0.16
SMARCAL1-208ENST00000434435 I3L3M4 83 aa16.07■□□□□ 0.16
SMARCAL1-208ENST00000434435 C18orf32Q8TCD1 76 aa16.07■□□□□ 0.16
SMARCAL1-208ENST00000434435 GTSF1LQ9H1H1 148 aa16.07■□□□□ 0.16
SMARCAL1-208ENST00000434435 COTL1Q14019 142 aa16.06■□□□□ 0.16
SMARCAL1-208ENST00000434435 TMEM97Q5BJF2 176 aa16.06■□□□□ 0.16
SMARCAL1-208ENST00000434435 C1orf196B1AJZ1 125 aa16.05■□□□□ 0.16
SMARCAL1-208ENST00000434435 IQCJQ1A5X6 159 aa16.05■□□□□ 0.16
SMARCAL1-208ENST00000434435 KIR2DL4Q99706 377 aa16.05■□□□□ 0.16
SMARCAL1-208ENST00000434435 NXT2Q9NPJ8 142 aaKnown RBP16.05■□□□□ 0.16
SMARCAL1-208ENST00000434435 TIRAPP58753 221 aa16.04■□□□□ 0.16
SMARCAL1-208ENST00000434435 CASC10Q5T4H9 136 aa16.04■□□□□ 0.16
SMARCAL1-208ENST00000434435 Q8N8P6 123 aa16.04■□□□□ 0.16
SMARCAL1-208ENST00000434435 IGLV2-18A0A075B6J9 118 aa16.03■□□□□ 0.16
SMARCAL1-208ENST00000434435 LYPD5Q6UWN5 251 aa16.03■□□□□ 0.16
SMARCAL1-208ENST00000434435 PRSS3P2Q8NHM4 247 aa16.03■□□□□ 0.16
SMARCAL1-208ENST00000434435 STARD9Q9P2P6 4700 aa16.02■□□□□ 0.16
SMARCAL1-208ENST00000434435 TCAPO15273 167 aa16.02■□□□□ 0.16
SMARCAL1-208ENST00000434435 FCER1GP30273 86 aa16.02■□□□□ 0.16
SMARCAL1-208ENST00000434435 IFI27P40305 119 aaPredicted RBP16.02■□□□□ 0.16
SMARCAL1-208ENST00000434435 TSHBP01222 138 aa16.01■□□□□ 0.15
SMARCAL1-208ENST00000434435 CCL18P55774 89 aa16.01■□□□□ 0.15
SMARCAL1-208ENST00000434435 ESRGQ1W209 222 aa16.01■□□□□ 0.15
SMARCAL1-208ENST00000434435 DEFB104AQ8WTQ1 72 aa16.01■□□□□ 0.15
SMARCAL1-208ENST00000434435 TRBV6-8A0A0A6YYG3 113 aa16■□□□□ 0.15
SMARCAL1-208ENST00000434435 AMTP48728 403 aa16■□□□□ 0.15
SMARCAL1-208ENST00000434435 LELP1Q5T871 98 aa16■□□□□ 0.15
SMARCAL1-208ENST00000434435 FA2HQ7L5A8 372 aa16■□□□□ 0.15
SMARCAL1-208ENST00000434435 TRBV25-1A0A075B6N4 114 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 IGHV1-24A0A0C4DH33 117 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 HIST1H2BKO60814 126 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 HIST1H2BJP06899 126 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 HIST1H2BOP23527 126 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms