RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 IGHV3-53P01767 116 aa11.6□□□□□ -0.55
TTC28-202ENST00000431039 ATP5G1P05496 136 aa11.6□□□□□ -0.55
TTC28-202ENST00000431039 MGPP08493 103 aa11.6□□□□□ -0.55
TTC28-202ENST00000431039 SLAQ13239 276 aa11.6□□□□□ -0.55
TTC28-202ENST00000431039 MRPL51Q4U2R6 128 aaKnown RBP11.6□□□□□ -0.55
TTC28-202ENST00000431039 MRPL18Q9H0U6 180 aaKnown RBP11.6□□□□□ -0.55
TTC28-202ENST00000431039 IGHV3-73A0A0B4J1V6 119 aa11.59□□□□□ -0.55
TTC28-202ENST00000431039 A0A1B0GVY2 172 aa11.59□□□□□ -0.55
TTC28-202ENST00000431039 M0R2N4 97 aa11.59□□□□□ -0.55
TTC28-202ENST00000431039 FABP9Q0Z7S8 132 aa11.59□□□□□ -0.55
TTC28-202ENST00000431039 FHL2Q14192 279 aa11.59□□□□□ -0.55
TTC28-202ENST00000431039 MRAP2Q96G30 205 aa11.59□□□□□ -0.55
TTC28-202ENST00000431039 F5H697 171 aa11.58□□□□□ -0.56
TTC28-202ENST00000431039 PPBPP02775 128 aa11.58□□□□□ -0.56
TTC28-202ENST00000431039 GATA1P15976 413 aaPredicted RBP11.58□□□□□ -0.56
TTC28-202ENST00000431039 ZNF56Q15929 161 aa11.58□□□□□ -0.56
TTC28-202ENST00000431039 TRGV4A0A0C4DH28 118 aa11.57□□□□□ -0.56
TTC28-202ENST00000431039 SUMO4Q6EEV6 95 aa11.57□□□□□ -0.56
TTC28-202ENST00000431039 Q6ZSN1 163 aa11.57□□□□□ -0.56
TTC28-202ENST00000431039 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.57□□□□□ -0.56
TTC28-202ENST00000431039 TRBV6-4A0A1B0GX49 114 aa11.56□□□□□ -0.56
TTC28-202ENST00000431039 PRSS29PA6NIE9 313 aa11.56□□□□□ -0.56
TTC28-202ENST00000431039 H7C1H1 209 aa11.56□□□□□ -0.56
TTC28-202ENST00000431039 M0QY20 66 aa11.56□□□□□ -0.56
TTC28-202ENST00000431039 TRGC2P03986 189 aa11.56□□□□□ -0.56
TTC28-202ENST00000431039 P0DMU3 169 aa11.56□□□□□ -0.56
TTC28-202ENST00000431039 FAM231AP0DMU4 169 aa11.56□□□□□ -0.56
TTC28-202ENST00000431039 FAM231CP0DMU5 169 aa11.56□□□□□ -0.56
TTC28-202ENST00000431039 CKS2P33552 79 aa11.56□□□□□ -0.56
TTC28-202ENST00000431039 TRAV26-2A0A0B4J265 109 aa11.55□□□□□ -0.56
TTC28-202ENST00000431039 PHOX2AO14813 284 aa11.55□□□□□ -0.56
TTC28-202ENST00000431039 RTL8CO15255 209 aa11.55□□□□□ -0.56
TTC28-202ENST00000431039 HOXA5P20719 270 aa11.55□□□□□ -0.56
TTC28-202ENST00000431039 KIAA1644Q3SXP7 199 aa11.55□□□□□ -0.56
TTC28-202ENST00000431039 ORMDL3Q8N138 153 aa11.55□□□□□ -0.56
TTC28-202ENST00000431039 HHLA3Q9XRX5 114 aa11.55□□□□□ -0.56
TTC28-202ENST00000431039 D6R8Y8 96 aa11.54□□□□□ -0.56
TTC28-202ENST00000431039 PPP1R17O96001 155 aa11.54□□□□□ -0.56
TTC28-202ENST00000431039 PRO0255Q9UI72 69 aa11.54□□□□□ -0.56
TTC28-202ENST00000431039 LAMTOR2Q9Y2Q5 125 aa11.54□□□□□ -0.56
TTC28-202ENST00000431039 TRBV10-1A0A0K0K1A3 114 aa11.53□□□□□ -0.56
TTC28-202ENST00000431039 F5H768 121 aa11.53□□□□□ -0.56
TTC28-202ENST00000431039 SMKR1H3BMG3 65 aa11.53□□□□□ -0.56
TTC28-202ENST00000431039 GAS8-AS1O95177 125 aa11.53□□□□□ -0.56
TTC28-202ENST00000431039 CRYBA4P53673 196 aa11.53□□□□□ -0.56
TTC28-202ENST00000431039 SLC25A29Q8N8R3 303 aa11.53□□□□□ -0.56
TTC28-202ENST00000431039 PRELID3AQ96N28 172 aa11.53□□□□□ -0.56
TTC28-202ENST00000431039 ALKBH7Q9BT30 221 aaPredicted RBP11.53□□□□□ -0.56
TTC28-202ENST00000431039 NACAE9PAV3 2078 aa11.53□□□□□ -0.56
TTC28-202ENST00000431039 IGLV2-18A0A075B6J9 118 aa11.52□□□□□ -0.57
TTC28-202ENST00000431039 K7EQD1 137 aa11.52□□□□□ -0.57
TTC28-202ENST00000431039 NCR2O95944 276 aa11.52□□□□□ -0.57
TTC28-202ENST00000431039 HTN3P15516 51 aa11.52□□□□□ -0.57
TTC28-202ENST00000431039 RHOHQ15669 191 aa11.52□□□□□ -0.57
TTC28-202ENST00000431039 UBE2DNLQ8IWF7 75 aa11.52□□□□□ -0.57
TTC28-202ENST00000431039 NRACQ8N912 160 aa11.52□□□□□ -0.57
TTC28-202ENST00000431039 DNAJC30Q96LL9 226 aa11.52□□□□□ -0.57
TTC28-202ENST00000431039 PRADC1Q9BSG0 188 aa11.52□□□□□ -0.57
TTC28-202ENST00000431039 NIT2Q9NQR4 276 aa11.52□□□□□ -0.57
TTC28-202ENST00000431039 TRBV6-5A0A0K0K1A5 114 aa11.51□□□□□ -0.57
TTC28-202ENST00000431039 PAX4O43316 350 aa11.5□□□□□ -0.57
TTC28-202ENST00000431039 TNFRSF6BO95407 300 aa11.5□□□□□ -0.57
TTC28-202ENST00000431039 SRIP30626 198 aa11.5□□□□□ -0.57
TTC28-202ENST00000431039 OR10J3Q5JRS4 329 aa11.5□□□□□ -0.57
TTC28-202ENST00000431039 RPL39LQ96EH5 51 aaKnown RBP11.5□□□□□ -0.57
TTC28-202ENST00000431039 C20orf78Q9BR46 151 aa11.5□□□□□ -0.57
TTC28-202ENST00000431039 PRSS47A8MTI9 375 aa11.49□□□□□ -0.57
TTC28-202ENST00000431039 H3BNG1 76 aa11.49□□□□□ -0.57
TTC28-202ENST00000431039 NPYP01303 97 aa11.49□□□□□ -0.57
TTC28-202ENST00000431039 NEXN-AS1Q8NBZ9 246 aa11.49□□□□□ -0.57
TTC28-202ENST00000431039 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
TTC28-202ENST00000431039 Q9UF83 564 aa11.49□□□□□ -0.57
TTC28-202ENST00000431039 TRAV26-1A0A087WT03 109 aa11.48□□□□□ -0.57
TTC28-202ENST00000431039 C1orf196B1AJZ1 125 aa11.48□□□□□ -0.57
TTC28-202ENST00000431039 RPL36AP83881 106 aaKnown RBP11.48□□□□□ -0.57
TTC28-202ENST00000431039 RPL36ALQ969Q0 106 aaKnown RBP11.48□□□□□ -0.57
TTC28-202ENST00000431039 ST20Q9HBF5 79 aa11.48□□□□□ -0.57
TTC28-202ENST00000431039 TNFRSF18Q9Y5U5 241 aa11.48□□□□□ -0.57
TTC28-202ENST00000431039 HSPG2P98160 4391 aa11.48□□□□□ -0.57
TTC28-202ENST00000431039 TRBV7-3A0A075B6L6 115 aa11.47□□□□□ -0.57
TTC28-202ENST00000431039 SUMO2P61956 95 aaKnown RBP11.47□□□□□ -0.57
TTC28-202ENST00000431039 RPL32P62910 135 aaKnown RBP11.47□□□□□ -0.57
TTC28-202ENST00000431039 A0A0J9YY99 117 aa11.46□□□□□ -0.57
TTC28-202ENST00000431039 LOC100131303A0A0U1RQF7 123 aa11.46□□□□□ -0.57
TTC28-202ENST00000431039 GYPEP15421 78 aa11.46□□□□□ -0.57
TTC28-202ENST00000431039 POLR2KP53803 58 aaKnown RBP11.46□□□□□ -0.57
TTC28-202ENST00000431039 ZNRF2Q8NHG8 242 aa11.46□□□□□ -0.57
TTC28-202ENST00000431039 MAP1LC3AQ9H492 121 aa11.46□□□□□ -0.57
TTC28-202ENST00000431039 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 LINC00694P0DN24 101 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 UBE2D3P61077 147 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 UBE2D2P62837 147 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 GAGE1Q13065 139 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 GAGE4Q13068 117 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 GAGE5Q13069 117 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 Q6ZR54 194 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 C18orf32Q8TCD1 76 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 TMEM70Q9BUB7 260 aa11.45□□□□□ -0.58
TTC28-202ENST00000431039 SDHAF1A6NFY7 115 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms