RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 LINC00315P59091 139 aa7.01□□□□□ -1.29
ATG4B-212ENST00000430617 RAB4BP61018 213 aa7.01□□□□□ -1.29
ATG4B-212ENST00000430617 SSTP61278 116 aa7.01□□□□□ -1.29
ATG4B-212ENST00000430617 FABP9Q0Z7S8 132 aa7.01□□□□□ -1.29
ATG4B-212ENST00000430617 FAM104BQ5XKR9 115 aa7.01□□□□□ -1.29
ATG4B-212ENST00000430617 AMN1Q8IY45 258 aa7.01□□□□□ -1.29
ATG4B-212ENST00000430617 LINC00612Q8N6U2 182 aa7.01□□□□□ -1.29
ATG4B-212ENST00000430617 RASL10AQ92737 203 aa7.01□□□□□ -1.29
ATG4B-212ENST00000430617 MRPL16Q9NX20 251 aaKnown RBP7.01□□□□□ -1.29
ATG4B-212ENST00000430617 APCSP02743 223 aa7□□□□□ -1.29
ATG4B-212ENST00000430617 FUSP35637 526 aaKnown RBP eCLIP7□□□□□ -1.29
ATG4B-212ENST00000430617 ZNF876PQ49A33 203 aa7□□□□□ -1.29
ATG4B-212ENST00000430617 SERTAD4-AS1Q5TG53 156 aa7□□□□□ -1.29
ATG4B-212ENST00000430617 UFSP1Q6NVU6 142 aa7□□□□□ -1.29
ATG4B-212ENST00000430617 DPH3P1Q9H4G8 78 aa7□□□□□ -1.29
ATG4B-212ENST00000430617 JPT2Q9H910 190 aa7□□□□□ -1.29
ATG4B-212ENST00000430617 LRP1Q07954 4544 aaKnown RBP7□□□□□ -1.29
ATG4B-212ENST00000430617 C1orf196B1AJZ1 125 aa6.99□□□□□ -1.29
ATG4B-212ENST00000430617 CRYGDP07320 174 aa6.99□□□□□ -1.29
ATG4B-212ENST00000430617 RAB4AP20338 218 aa6.99□□□□□ -1.29
ATG4B-212ENST00000430617 MRPL51Q4U2R6 128 aaKnown RBP6.99□□□□□ -1.29
ATG4B-212ENST00000430617 Q6ZTI0 123 aa6.99□□□□□ -1.29
ATG4B-212ENST00000430617 C14orf178Q8N769 122 aaPredicted RBP6.99□□□□□ -1.29
ATG4B-212ENST00000430617 SAMD10Q9BYL1 202 aa6.99□□□□□ -1.29
ATG4B-212ENST00000430617 NOP10Q9NPE3 64 aaKnown RBP6.99□□□□□ -1.29
ATG4B-212ENST00000430617 A0A087WWL8 130 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 TRGV1A0A0A0MS02 117 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 A8MWV9 139 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 RS1O15537 224 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 RAB5BP61020 215 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 KIAA1644Q3SXP7 199 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
ATG4B-212ENST00000430617 CFAP126Q5VTH2 177 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 SMIM15Q7Z3B0 74 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
ATG4B-212ENST00000430617 ALKBH7Q9BT30 221 aaPredicted RBP6.98□□□□□ -1.29
ATG4B-212ENST00000430617 TRAV4A0A0B4J268 109 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 LOC105371267A0A1B0GV96 52 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 LYRM9A8MSI8 78 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 D6R8Y8 96 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 GAS8-AS1O95177 125 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 NCR2O95944 276 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 SRIP30626 198 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 ZNRF2Q8NHG8 242 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 DKK2Q9UBU2 259 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
ATG4B-212ENST00000430617 TRAV26-2A0A0B4J265 109 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 KRTAP29-1A8MX34 341 aaPredicted RBP6.96□□□□□ -1.3
ATG4B-212ENST00000430617 SMKR1H3BMG3 65 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 RHODO00212 210 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 MGPP08493 103 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 EMP1P54849 157 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 FAM74A4Q5TZK3 123 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 FAM222AQ5U5X8 452 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 SUMO4Q6EEV6 95 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 ZFP2Q6ZN57 461 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 ORMDL3Q8N138 153 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 NRACQ8N912 160 aa6.96□□□□□ -1.3
ATG4B-212ENST00000430617 GAGE12BA1L429 117 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 GAGE7O76087 117 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 NPYP01303 97 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 PPBPP02775 128 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 GAGE12FP0CL80 117 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 GAGE12GP0CL81 117 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 GAGE12IP0CL82 117 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 SMIM17P0DL12 118 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 ZNF56Q15929 161 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 C18orf32Q8TCD1 76 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 ZNF479Q96JC4 524 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 KRTAP1-5Q9BYS1 174 aa6.95□□□□□ -1.3
ATG4B-212ENST00000430617 GATA1P15976 413 aaPredicted RBP6.94□□□□□ -1.3
ATG4B-212ENST00000430617 CKS2P33552 79 aa6.94□□□□□ -1.3
ATG4B-212ENST00000430617 LINC00310P59036 64 aa6.94□□□□□ -1.3
ATG4B-212ENST00000430617 COA6Q5JTJ3 125 aaKnown RBP6.94□□□□□ -1.3
ATG4B-212ENST00000430617 PRELID3AQ96N28 172 aa6.94□□□□□ -1.3
ATG4B-212ENST00000430617 LAMTOR2Q9Y2Q5 125 aa6.94□□□□□ -1.3
ATG4B-212ENST00000430617 TRGV2A0A075B6R0 118 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 IGHV3-73A0A0B4J1V6 119 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 M0QY20 66 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 IGHV3-53P01767 116 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 HTN3P15516 51 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 BTF3P20290 206 aaKnown RBP6.93□□□□□ -1.3
ATG4B-212ENST00000430617 KRTAP10-1P60331 282 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 HAMPP81172 84 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 Q0VG73 95 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 IQCJQ1A5X6 159 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 OR10J3Q5JRS4 329 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 Q6ZSN1 163 aa6.93□□□□□ -1.3
ATG4B-212ENST00000430617 OR4C5Q8NGB2 326 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms