RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SLC25A16P16260 332 aa9.76□□□□□ -0.85
COL12A1-205ENST00000425443 RPL35AP18077 110 aaKnown RBP9.76□□□□□ -0.85
COL12A1-205ENST00000425443 JPT2Q9H910 190 aa9.76□□□□□ -0.85
COL12A1-205ENST00000425443 RNF223E7ERA6 249 aa9.76□□□□□ -0.85
COL12A1-205ENST00000425443 IGLV1-40P01703 118 aa9.76□□□□□ -0.85
COL12A1-205ENST00000425443 C10orf99Q6UWK7 81 aa9.76□□□□□ -0.85
COL12A1-205ENST00000425443 ZFAND2AQ8N6M9 145 aa9.76□□□□□ -0.85
COL12A1-205ENST00000425443 ATP5LO75964 103 aa9.76□□□□□ -0.85
COL12A1-205ENST00000425443 SCGB3A1Q96QR1 104 aa9.76□□□□□ -0.85
COL12A1-205ENST00000425443 F5H697 171 aa9.75□□□□□ -0.85
COL12A1-205ENST00000425443 FAM74A4Q5TZK3 123 aa9.75□□□□□ -0.85
COL12A1-205ENST00000425443 RASL10AQ92737 203 aa9.75□□□□□ -0.85
COL12A1-205ENST00000425443 PRO0461Q9UI25 63 aa9.75□□□□□ -0.85
COL12A1-205ENST00000425443 MXRA5Q9NR99 2828 aa9.75□□□□□ -0.85
COL12A1-205ENST00000425443 A0A087WWL8 130 aa9.75□□□□□ -0.85
COL12A1-205ENST00000425443 PRADC1Q9BSG0 188 aa9.75□□□□□ -0.85
COL12A1-205ENST00000425443 EPG5Q9HCE0 2579 aa9.74□□□□□ -0.85
COL12A1-205ENST00000425443 IGHV4-4A0A075B6R2 117 aa9.74□□□□□ -0.85
COL12A1-205ENST00000425443 SOCS3O14543 225 aa9.74□□□□□ -0.85
COL12A1-205ENST00000425443 LINC01587Q99440 93 aa9.74□□□□□ -0.85
COL12A1-205ENST00000425443 IGLL5B9A064 214 aa9.74□□□□□ -0.85
COL12A1-205ENST00000425443 SMIM2Q9BVW6 85 aa9.74□□□□□ -0.85
COL12A1-205ENST00000425443 C10orf126Q8N4M7 172 aa9.73□□□□□ -0.85
COL12A1-205ENST00000425443 MRAPQ8TCY5 172 aa9.73□□□□□ -0.85
COL12A1-205ENST00000425443 MUC4Q99102 2169 aa9.73□□□□□ -0.85
COL12A1-205ENST00000425443 TRAV12-2A0A075B6T6 113 aa9.73□□□□□ -0.85
COL12A1-205ENST00000425443 HTN1P15515 57 aa9.73□□□□□ -0.85
COL12A1-205ENST00000425443 SUMO2P61956 95 aaKnown RBP9.73□□□□□ -0.85
COL12A1-205ENST00000425443 CARD19Q96LW7 228 aa9.73□□□□□ -0.85
COL12A1-205ENST00000425443 HIST1H4GQ99525 98 aa9.73□□□□□ -0.85
COL12A1-205ENST00000425443 TRAV12-3A0A0B4J271 114 aa9.73□□□□□ -0.85
COL12A1-205ENST00000425443 TINCRA0A1B0GVN0 87 aa9.73□□□□□ -0.85
COL12A1-205ENST00000425443 DPH3P1Q9H4G8 78 aa9.73□□□□□ -0.85
COL12A1-205ENST00000425443 ZNF688P0C7X2 276 aa9.72□□□□□ -0.85
COL12A1-205ENST00000425443 NACAE9PAV3 2078 aa9.72□□□□□ -0.85
COL12A1-205ENST00000425443 FAM236AA0A1B0GUQ0 79 aa9.72□□□□□ -0.85
COL12A1-205ENST00000425443 FAM236BA0A1B0GV22 79 aa9.72□□□□□ -0.85
COL12A1-205ENST00000425443 E9PLD3 99 aa9.72□□□□□ -0.85
COL12A1-205ENST00000425443 HERVK_113P63121 156 aa9.72□□□□□ -0.85
COL12A1-205ENST00000425443 DUX3Q96PT4 197 aa9.72□□□□□ -0.85
COL12A1-205ENST00000425443 SMCPP49901 116 aaPredicted RBP9.71□□□□□ -0.85
COL12A1-205ENST00000425443 PSMG4Q5JS54 123 aa9.71□□□□□ -0.85
COL12A1-205ENST00000425443 C9orf153Q5TBE3 101 aa9.71□□□□□ -0.85
COL12A1-205ENST00000425443 C12orf74Q32Q52 190 aa9.71□□□□□ -0.85
COL12A1-205ENST00000425443 TEX15Q9BXT5 2789 aa9.71□□□□□ -0.86
COL12A1-205ENST00000425443 LOC107984156A0A0G2JMH3 177 aa9.71□□□□□ -0.86
COL12A1-205ENST00000425443 K7EMT4 169 aa9.71□□□□□ -0.86
COL12A1-205ENST00000425443 CD7P09564 240 aa9.71□□□□□ -0.86
COL12A1-205ENST00000425443 PSMB8P28062 276 aa9.71□□□□□ -0.86
COL12A1-205ENST00000425443 C2orf66Q6UXQ4 117 aa9.71□□□□□ -0.86
COL12A1-205ENST00000425443 ARL17AQ8IVW1 177 aa9.71□□□□□ -0.86
COL12A1-205ENST00000425443 FBN2P35556 2912 aa9.7□□□□□ -0.86
COL12A1-205ENST00000425443 TRBV7-3A0A075B6L6 115 aa9.7□□□□□ -0.86
COL12A1-205ENST00000425443 SNRPD3P62318 126 aaKnown RBP9.7□□□□□ -0.86
COL12A1-205ENST00000425443 NEXN-AS1Q8NBZ9 246 aa9.7□□□□□ -0.86
COL12A1-205ENST00000425443 DLX4Q92988 240 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-205ENST00000425443 TMEM262E9PQX1 116 aa9.7□□□□□ -0.86
COL12A1-205ENST00000425443 SYNJ2BPP57105 145 aa9.7□□□□□ -0.86
COL12A1-205ENST00000425443 CFHR3Q02985 330 aa9.7□□□□□ -0.86
COL12A1-205ENST00000425443 HIST2H2BDQ6DRA6 164 aa9.7□□□□□ -0.86
COL12A1-205ENST00000425443 TOMM6Q96B49 74 aa9.7□□□□□ -0.86
COL12A1-205ENST00000425443 F8VRH5 84 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 RS1O15537 224 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
COL12A1-205ENST00000425443 HLA-DRB4P13762 266 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 PPDPFLQ8WWR9 84 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 HLA-DRB4X5D2U9 266 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 H7C1H1 209 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 LRRC75A-AS1Q8N1F1 130 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 BAALCQ8WXS3 180 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 ZNF256Q9Y2P7 627 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-205ENST00000425443 JMJD1CQ15652 2540 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 DUSP14O95147 198 aaKnown RBP9.69□□□□□ -0.86
COL12A1-205ENST00000425443 PLNP26678 52 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 RPL39P62891 51 aaKnown RBP9.69□□□□□ -0.86
COL12A1-205ENST00000425443 ORMDL2Q53FV1 153 aa9.69□□□□□ -0.86
COL12A1-205ENST00000425443 BEX4Q9NWD9 120 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-205ENST00000425443 NF1P21359 2839 aa9.68□□□□□ -0.86
COL12A1-205ENST00000425443 LGALS1P09382 135 aaKnown RBP9.68□□□□□ -0.86
COL12A1-205ENST00000425443 PSMB2P49721 201 aa9.68□□□□□ -0.86
COL12A1-205ENST00000425443 SCGB1D4Q6XE38 83 aa9.68□□□□□ -0.86
COL12A1-205ENST00000425443 KLHL30-AS1Q8NEE0 82 aa9.68□□□□□ -0.86
COL12A1-205ENST00000425443 PLEKHB2Q96CS7 222 aa9.68□□□□□ -0.86
COL12A1-205ENST00000425443 V9GYY9 64 aa9.68□□□□□ -0.86
COL12A1-205ENST00000425443 USP24Q9UPU5 2620 aa9.67□□□□□ -0.86
COL12A1-205ENST00000425443 TRAV12-1A0A0B4J245 112 aa9.67□□□□□ -0.86
COL12A1-205ENST00000425443 CRYGDP07320 174 aa9.67□□□□□ -0.86
COL12A1-205ENST00000425443 DCANP1Q8TF63 244 aa9.67□□□□□ -0.86
COL12A1-205ENST00000425443 FAM19A4Q96LR4 140 aa9.67□□□□□ -0.86
COL12A1-205ENST00000425443 MYMXA0A1B0GTQ4 84 aa9.67□□□□□ -0.86
COL12A1-205ENST00000425443 TSHBP01222 138 aa9.67□□□□□ -0.86
COL12A1-205ENST00000425443 ZNF415Q09FC8 603 aa9.67□□□□□ -0.86
COL12A1-205ENST00000425443 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
COL12A1-205ENST00000425443 MORN3Q6PF18 240 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-205ENST00000425443 TP53TG1Q9Y2A0 90 aa9.66□□□□□ -0.86
COL12A1-205ENST00000425443 HOXA3O43365 443 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-205ENST00000425443 MED14OSP0DP75 135 aa9.66□□□□□ -0.86
COL12A1-205ENST00000425443 LINC00315P59091 139 aa9.66□□□□□ -0.86
COL12A1-205ENST00000425443 SPINK13Q1W4C9 94 aa9.66□□□□□ -0.86
COL12A1-205ENST00000425443 H7C2G1 150 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms