RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 TRGV11A0A075B6L2 103 aa11.83□□□□□ -0.52
CTSB-203ENST00000420692 P0DMU3 169 aa11.83□□□□□ -0.52
CTSB-203ENST00000420692 FAM231AP0DMU4 169 aa11.83□□□□□ -0.52
CTSB-203ENST00000420692 FAM231CP0DMU5 169 aa11.83□□□□□ -0.52
CTSB-203ENST00000420692 HTN1P15515 57 aa11.83□□□□□ -0.52
CTSB-203ENST00000420692 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
CTSB-203ENST00000420692 H3BUT2 72 aa11.83□□□□□ -0.52
CTSB-203ENST00000420692 CD300EQ496F6 205 aaPredicted RBP11.83□□□□□ -0.52
CTSB-203ENST00000420692 RNASE8Q8TDE3 154 aaKnown RBP11.83□□□□□ -0.52
CTSB-203ENST00000420692 RAX2Q96IS3 184 aa11.83□□□□□ -0.52
CTSB-203ENST00000420692 SETXQ7Z333 2677 aaKnown RBP11.82□□□□□ -0.52
CTSB-203ENST00000420692 C11orf86A6NJI1 115 aa11.82□□□□□ -0.52
CTSB-203ENST00000420692 EMP1P54849 157 aa11.82□□□□□ -0.52
CTSB-203ENST00000420692 PROK1P58294 105 aa11.82□□□□□ -0.52
CTSB-203ENST00000420692 CEND1Q8N111 149 aa11.82□□□□□ -0.52
CTSB-203ENST00000420692 C11orf44Q8N8P7 122 aa11.82□□□□□ -0.52
CTSB-203ENST00000420692 CST9LQ9H4G1 147 aa11.82□□□□□ -0.52
CTSB-203ENST00000420692 KMT2BQ9UMN6 2715 aaPredicted RBP11.82□□□□□ -0.52
CTSB-203ENST00000420692 PHLDA1Q8WV24 401 aaPredicted RBP11.82□□□□□ -0.52
CTSB-203ENST00000420692 SPAG8Q99932 426 aaPredicted RBP11.82□□□□□ -0.52
CTSB-203ENST00000420692 E9PLD3 99 aa11.81□□□□□ -0.52
CTSB-203ENST00000420692 K7ERJ3 54 aa11.81□□□□□ -0.52
CTSB-203ENST00000420692 UFSP1Q6NVU6 142 aa11.81□□□□□ -0.52
CTSB-203ENST00000420692 TRPT1Q86TN4 253 aaKnown RBP11.81□□□□□ -0.52
CTSB-203ENST00000420692 TIMM17AQ99595 171 aa11.81□□□□□ -0.52
CTSB-203ENST00000420692 UNC79Q9P2D8 2635 aa11.81□□□□□ -0.52
CTSB-203ENST00000420692 OPRPNQ99935 248 aaPredicted RBP11.8□□□□□ -0.52
CTSB-203ENST00000420692 PRADC1Q9BSG0 188 aa11.8□□□□□ -0.52
CTSB-203ENST00000420692 Q9UF83 564 aa11.8□□□□□ -0.52
CTSB-203ENST00000420692 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
CTSB-203ENST00000420692 OR11H12B2RN74 326 aa11.8□□□□□ -0.52
CTSB-203ENST00000420692 PMVKQ15126 192 aa11.8□□□□□ -0.52
CTSB-203ENST00000420692 OR11H2Q8NH07 326 aa11.8□□□□□ -0.52
CTSB-203ENST00000420692 DYNLRB2Q8TF09 96 aa11.8□□□□□ -0.52
CTSB-203ENST00000420692 TMEM141Q96I45 108 aa11.8□□□□□ -0.52
CTSB-203ENST00000420692 IGHV3-73A0A0B4J1V6 119 aa11.79□□□□□ -0.52
CTSB-203ENST00000420692 CD28P10747 220 aa11.79□□□□□ -0.52
CTSB-203ENST00000420692 NSUN5P1Q3KNT7 163 aa11.79□□□□□ -0.52
CTSB-203ENST00000420692 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
CTSB-203ENST00000420692 SMIM13P0DJ93 91 aa11.79□□□□□ -0.52
CTSB-203ENST00000420692 FHL3Q13643 280 aa11.79□□□□□ -0.52
CTSB-203ENST00000420692 Q6ZSN1 163 aa11.79□□□□□ -0.52
CTSB-203ENST00000420692 ZNRF2Q8NHG8 242 aa11.79□□□□□ -0.52
CTSB-203ENST00000420692 A0A1W2PRX2 142 aa11.78□□□□□ -0.52
CTSB-203ENST00000420692 ODF3L2Q3SX64 289 aa11.78□□□□□ -0.52
CTSB-203ENST00000420692 JMJD1CQ15652 2540 aa11.78□□□□□ -0.52
CTSB-203ENST00000420692 LINC01549A6NIU2 74 aa11.78□□□□□ -0.52
CTSB-203ENST00000420692 C11orf72Q8NBR9 251 aa11.78□□□□□ -0.52
CTSB-203ENST00000420692 GAGE10A6NGK3 116 aa11.77□□□□□ -0.53
CTSB-203ENST00000420692 RHOHQ15669 191 aa11.77□□□□□ -0.53
CTSB-203ENST00000420692 C20orf203Q8NBC4 194 aa11.77□□□□□ -0.53
CTSB-203ENST00000420692 EDA2RQ9HAV5 297 aa11.77□□□□□ -0.53
CTSB-203ENST00000420692 A0A1W2PPM0 123 aa11.76□□□□□ -0.53
CTSB-203ENST00000420692 I3L3M4 83 aa11.76□□□□□ -0.53
CTSB-203ENST00000420692 TAL2Q16559 108 aa11.76□□□□□ -0.53
CTSB-203ENST00000420692 PLEKHB2Q96CS7 222 aa11.76□□□□□ -0.53
CTSB-203ENST00000420692 NHP2Q9NX24 153 aaKnown RBP11.76□□□□□ -0.53
CTSB-203ENST00000420692 M0R2P5 195 aa11.76□□□□□ -0.53
CTSB-203ENST00000420692 FAM104AQ969W3 186 aa11.76□□□□□ -0.53
CTSB-203ENST00000420692 K7EP34 96 aa11.75□□□□□ -0.53
CTSB-203ENST00000420692 GAGE12BA1L429 117 aa11.75□□□□□ -0.53
CTSB-203ENST00000420692 CCL24O00175 119 aa11.75□□□□□ -0.53
CTSB-203ENST00000420692 LINC01587Q99440 93 aa11.75□□□□□ -0.53
CTSB-203ENST00000420692 CITED2Q99967 270 aaPredicted RBP11.75□□□□□ -0.53
CTSB-203ENST00000420692 TSPEAR-AS2P59090 65 aa11.74□□□□□ -0.53
CTSB-203ENST00000420692 CFAP126Q5VTH2 177 aa11.74□□□□□ -0.53
CTSB-203ENST00000420692 TEX29Q8N6K0 151 aa11.74□□□□□ -0.53
CTSB-203ENST00000420692 HIST1H4GQ99525 98 aa11.74□□□□□ -0.53
CTSB-203ENST00000420692 LINC00467Q9BRT7 94 aa11.74□□□□□ -0.53
CTSB-203ENST00000420692 AZU1P20160 251 aa11.74□□□□□ -0.53
CTSB-203ENST00000420692 SAMD5Q5TGI4 173 aa11.74□□□□□ -0.53
CTSB-203ENST00000420692 ZNF815PA8K554 130 aa11.73□□□□□ -0.53
CTSB-203ENST00000420692 PLA2G2AP14555 144 aa11.73□□□□□ -0.53
CTSB-203ENST00000420692 RBX1P62877 108 aa11.73□□□□□ -0.53
CTSB-203ENST00000420692 ZNF415Q09FC8 603 aa11.73□□□□□ -0.53
CTSB-203ENST00000420692 LINC01006Q8NI28 216 aa11.73□□□□□ -0.53
CTSB-203ENST00000420692 PTH2Q96A98 100 aa11.73□□□□□ -0.53
CTSB-203ENST00000420692 A8MWV9 139 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 FOSL1P15407 271 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 C12orf74Q32Q52 190 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 PAPPA-AS1Q5QFB9 102 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 PIK3CD-AS1Q5SR53 167 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 CLUHP3Q96NS8 147 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 XCL2Q9UBD3 114 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 IGLV4-3A0A075B6K6 122 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 NFE4Q86UQ8 179 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 YAE1D1Q9NRH1 226 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 NOTCH3Q9UM47 2321 aa11.72□□□□□ -0.53
CTSB-203ENST00000420692 FASNP49327 2511 aaKnown RBP11.71□□□□□ -0.53
CTSB-203ENST00000420692 TRAV25A0A0B4J276 109 aa11.71□□□□□ -0.53
CTSB-203ENST00000420692 BEAN1Q3B7T3 259 aa11.71□□□□□ -0.53
CTSB-203ENST00000420692 GTF2H5Q6ZYL4 71 aa11.71□□□□□ -0.53
CTSB-203ENST00000420692 C1orf158Q8N1D5 194 aa11.71□□□□□ -0.53
CTSB-203ENST00000420692 AMELXQ99217 191 aa11.71□□□□□ -0.53
CTSB-203ENST00000420692 MRPL16Q9NX20 251 aaKnown RBP11.71□□□□□ -0.53
CTSB-203ENST00000420692 INSP01308 110 aa11.71□□□□□ -0.54
CTSB-203ENST00000420692 SPCS1Q9Y6A9 102 aa11.71□□□□□ -0.54
CTSB-203ENST00000420692 A0A1B0GWB2 263 aa11.7□□□□□ -0.54
CTSB-203ENST00000420692 IGLL5B9A064 214 aa11.7□□□□□ -0.54
CTSB-203ENST00000420692 TMEM170BQ5T4T1 132 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms