RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 LINC00310P59036 64 aa9.44□□□□□ -0.9
HLA-DMB-258ENST00000418107 SUMO4Q6EEV6 95 aa9.44□□□□□ -0.9
HLA-DMB-258ENST00000418107 FAM19A2Q8N3H0 131 aa9.44□□□□□ -0.9
HLA-DMB-258ENST00000418107 PACRGQ96M98 296 aaPredicted RBP9.44□□□□□ -0.9
HLA-DMB-258ENST00000418107 SMIM9A6NGZ8 99 aa9.43□□□□□ -0.9
HLA-DMB-258ENST00000418107 DAZ2Q13117 558 aaKnown RBP9.43□□□□□ -0.9
HLA-DMB-258ENST00000418107 NRACQ8N912 160 aa9.43□□□□□ -0.9
HLA-DMB-258ENST00000418107 OR4C5Q8NGB2 326 aa9.43□□□□□ -0.9
HLA-DMB-258ENST00000418107 RASL10AQ92737 203 aa9.43□□□□□ -0.9
HLA-DMB-258ENST00000418107 NXT2Q9NPJ8 142 aaKnown RBP9.43□□□□□ -0.9
HLA-DMB-258ENST00000418107 AP5S1Q9NUS5 200 aa9.43□□□□□ -0.9
HLA-DMB-258ENST00000418107 H7C1H1 209 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 RHODO00212 210 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 LINC00315P59091 139 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 LGALS9BQ3B8N2 356 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 CFAP126Q5VTH2 177 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 Q6ZTI0 123 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 POM121L12Q8N7R1 296 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 OR11H2Q8NH07 326 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 LINC00476Q8WZB0 136 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 RPL39LQ96EH5 51 aaKnown RBP9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 NDUFAF3Q9BU61 184 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 ST20Q9HBF5 79 aa9.42□□□□□ -0.9
HLA-DMB-258ENST00000418107 KMT2AQ03164 3969 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 TRGV2A0A075B6R0 118 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 GAGE12BA1L429 117 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 RS1O15537 224 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 GAGE7O76087 117 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 GAGE12FP0CL80 117 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 GAGE12GP0CL81 117 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 GAGE12IP0CL82 117 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 Q8N8P6 123 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 URB1-AS1Q96HZ7 61 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 C20orf78Q9BR46 151 aa9.41□□□□□ -0.9
HLA-DMB-258ENST00000418107 SUMO2P61956 95 aaKnown RBP9.4□□□□□ -0.9
HLA-DMB-258ENST00000418107 PMCHL1Q16048 86 aa9.4□□□□□ -0.9
HLA-DMB-258ENST00000418107 X6R8D5 127 aa9.4□□□□□ -0.9
HLA-DMB-258ENST00000418107 LY6G6CO95867 125 aa9.39□□□□□ -0.91
HLA-DMB-258ENST00000418107 IGHV3-53P01767 116 aa9.39□□□□□ -0.91
HLA-DMB-258ENST00000418107 Q6ZWC4 215 aa9.39□□□□□ -0.91
HLA-DMB-258ENST00000418107 OVOL2Q9BRP0 275 aa9.39□□□□□ -0.91
HLA-DMB-258ENST00000418107 SMIM2Q9BVW6 85 aa9.39□□□□□ -0.91
HLA-DMB-258ENST00000418107 TRAV4A0A0B4J268 109 aa9.38□□□□□ -0.91
HLA-DMB-258ENST00000418107 IGHV1-24A0A0C4DH33 117 aa9.38□□□□□ -0.91
HLA-DMB-258ENST00000418107 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
HLA-DMB-258ENST00000418107 M0QY20 66 aa9.38□□□□□ -0.91
HLA-DMB-258ENST00000418107 ZFP2Q6ZN57 461 aa9.38□□□□□ -0.91
HLA-DMB-258ENST00000418107 RNF183Q96D59 192 aa9.38□□□□□ -0.91
HLA-DMB-258ENST00000418107 NIT2Q9NQR4 276 aa9.38□□□□□ -0.91
HLA-DMB-258ENST00000418107 PRSS47A8MTI9 375 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 DEFB130BP0DP73 79 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 DEFB130AP0DP74 79 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 LAGE3Q14657 143 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 ZNF479Q96JC4 524 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 TNFRSF18Q9Y5U5 241 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 IGHV4-28A0A0C4DH34 117 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 VCYO14598 125 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 TCAPO15273 167 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 LEPROTL1O95214 131 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 MIFP14174 115 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 KRTDAPP60985 99 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 UFSP1Q6NVU6 142 aa9.37□□□□□ -0.91
HLA-DMB-258ENST00000418107 PCLOQ9Y6V0 5065 aa9.36□□□□□ -0.91
HLA-DMB-258ENST00000418107 TRGV4A0A0C4DH28 118 aa9.36□□□□□ -0.91
HLA-DMB-258ENST00000418107 DEFB4AO15263 64 aa9.36□□□□□ -0.91
HLA-DMB-258ENST00000418107 SCGB1D1O95968 90 aa9.36□□□□□ -0.91
HLA-DMB-258ENST00000418107 NUDT3O95989 172 aa9.36□□□□□ -0.91
HLA-DMB-258ENST00000418107 HBDP02042 147 aa9.36□□□□□ -0.91
HLA-DMB-258ENST00000418107 TMEM70Q9BUB7 260 aa9.36□□□□□ -0.91
HLA-DMB-258ENST00000418107 HSPB8Q9UJY1 196 aa9.36□□□□□ -0.91
HLA-DMB-258ENST00000418107 IGLV2-18A0A075B6J9 118 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 TRBV6-5A0A0K0K1A5 114 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 LYRM9A8MSI8 78 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 CIDEAO60543 219 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 P0DMU3 169 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 FAM231AP0DMU4 169 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 FAM231CP0DMU5 169 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 FCER1GP30273 86 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 RPL32P62910 135 aaKnown RBP9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 ORMDL2Q53FV1 153 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 Q6ZSN1 163 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
HLA-DMB-258ENST00000418107 VPS13DQ5THJ4 4388 aa9.34□□□□□ -0.91
HLA-DMB-258ENST00000418107 SMIM6P0DI80 62 aa9.34□□□□□ -0.91
HLA-DMB-258ENST00000418107 BTF3P20290 206 aaKnown RBP9.34□□□□□ -0.91
HLA-DMB-258ENST00000418107 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
HLA-DMB-258ENST00000418107 FAM222AQ5U5X8 452 aa9.34□□□□□ -0.91
HLA-DMB-258ENST00000418107 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
HLA-DMB-258ENST00000418107 HECTD4Q9Y4D8 3996 aa9.33□□□□□ -0.92
HLA-DMB-258ENST00000418107 LINC01546A6NGU7 62 aa9.33□□□□□ -0.92
HLA-DMB-258ENST00000418107 K7EMI3 77 aa9.33□□□□□ -0.92
HLA-DMB-258ENST00000418107 K7EQD1 137 aa9.33□□□□□ -0.92
HLA-DMB-258ENST00000418107 DAD1P61803 113 aa9.33□□□□□ -0.92
HLA-DMB-258ENST00000418107 DEFB104AQ8WTQ1 72 aa9.33□□□□□ -0.92
HLA-DMB-258ENST00000418107 C12orf57Q99622 126 aa9.33□□□□□ -0.92
HLA-DMB-258ENST00000418107 MAP1LC3CQ9BXW4 147 aa9.33□□□□□ -0.92
HLA-DMB-258ENST00000418107 TP53TG1Q9Y2A0 90 aa9.33□□□□□ -0.92
HLA-DMB-258ENST00000418107 NUPR2A6NF83 97 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms