RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 PATE2Q6UY27 113 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 TMPRSS11AQ6ZMR5 421 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 ACBD7Q8N6N7 88 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 OCC1Q8TAD7 63 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 ASB13Q8WXK3 278 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 DIRAS2Q96HU8 199 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 ATP5SQ99766 215 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 BCL7BQ9BQE9 202 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 MARVELD1Q9BSK0 173 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 PDCD10Q9BUL8 212 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 DERL1Q9BUN8 251 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 TMEM109Q9BVC6 243 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 TMBIM4Q9HC24 238 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 FKBP14Q9NWM8 211 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 GID8Q9NWU2 228 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 OR5AC2Q9NZP5 309 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 LGALS13Q9UHV8 139 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 ANXA10Q9UJ72 324 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 FLVCR2Q9UPI3 526 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 PSG8Q9UQ74 426 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 PXMP4Q9Y6I8 212 aa0.78□□□□□ -2.28
LINC00428-201ENST00000415620 BBIP1A8MTZ0 92 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 M0R036 132 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 EI24O14681 340 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 CDS2O95674 445 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 HIST1H1DP16402 221 aaKnown RBP0.77□□□□□ -2.29
LINC00428-201ENST00000415620 ARPC4P59998 168 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 S100A10P60903 97 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 GNG11P61952 73 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 SPHARQ15513 63 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 IZUMO2Q6UXV1 221 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 MRPL55Q7Z7F7 128 aaKnown RBP0.77□□□□□ -2.29
LINC00428-201ENST00000415620 OR10R2Q8NGX6 335 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 MITD1Q8WV92 249 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 SMIM19Q96E16 107 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 MRPL48Q96GC5 212 aaKnown RBP0.77□□□□□ -2.29
LINC00428-201ENST00000415620 C16orf45Q96MC5 204 aaPredicted RBP0.77□□□□□ -2.29
LINC00428-201ENST00000415620 NKIRAS1Q9NYS0 192 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 RBM12B-AS1Q9P1G2 102 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 C6orf48Q9UBA6 75 aa0.77□□□□□ -2.29
LINC00428-201ENST00000415620 RRP15Q9Y3B9 282 aaKnown RBP0.77□□□□□ -2.29
LINC00428-201ENST00000415620 IGHV1-24A0A0C4DH33 117 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 LOC107984156A0A0G2JMH3 177 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 C5orf52A6NGY3 159 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 CEBPZOSA8MTT3 80 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 F6UZH7 168 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 SSX5O60225 188 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 HYPMO75409 117 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 CFDP00746 253 aaPredicted RBP0.76□□□□□ -2.29
LINC00428-201ENST00000415620 LINC00869P0C866 280 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 GPX4P36969 197 aaPredicted RBP0.76□□□□□ -2.29
LINC00428-201ENST00000415620 DAPP51397 102 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 AKR1C2P52895 323 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 NKX2-5P52952 324 aaPredicted RBP0.76□□□□□ -2.29
LINC00428-201ENST00000415620 PLP1P60201 277 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 SPCS3P61009 180 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 HERVK_113P61574 105 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 SPAG11BQ08648 103 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 GPR107Q5VW38 600 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 RPL22L1Q6P5R6 122 aaKnown RBP0.76□□□□□ -2.29
LINC00428-201ENST00000415620 UNQ6190/PRO20217Q6UXQ8 127 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 FAM19A1Q7Z5A9 133 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 ARPINQ7Z6K5 226 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 BPIFA4PQ86YQ2 179 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 ARL17AQ8IVW1 177 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 LINC00469Q8N7U9 141 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 OR1S1Q8NH92 325 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 PHYHIPQ92561 330 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 PTH2Q96A98 100 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 HIGD2AQ9BW72 106 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 ARL6Q9H0F7 186 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 FXYD6Q9H0Q3 95 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 ARV1Q9H2C2 271 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 MRPL35Q9NZE8 188 aaKnown RBP0.76□□□□□ -2.29
LINC00428-201ENST00000415620 IL36BQ9NZH7 164 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 NDUFA13Q9P0J0 144 aa0.76□□□□□ -2.29
LINC00428-201ENST00000415620 A0A0B4J2A0 478 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 TRBV7-9A0A0J9YWB2 115 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 LINC00959A0A1B0GUT2 108 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 LIMS3P0CW19 117 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 LIMS4P0CW20 117 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 HIST1H1EP10412 219 aaKnown RBP0.75□□□□□ -2.29
LINC00428-201ENST00000415620 S100A7P31151 101 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 CSN1S1P47710 185 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 RPS25P62851 125 aaKnown RBP0.75□□□□□ -2.29
LINC00428-201ENST00000415620 MRPL28Q13084 256 aaKnown RBP0.75□□□□□ -2.29
LINC00428-201ENST00000415620 C2orf76Q3KRA6 126 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 AARDQ4LEZ3 155 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 CCDC58Q4VC31 144 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 TMEM97Q5BJF2 176 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 HRCT1Q6UXD1 115 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 CYP2G1PQ6ZSU1 146 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 FAM231DQ6ZW35 169 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 LINC00305Q7Z4B0 112 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 LINC01551Q86U37 167 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 CBLN2Q8IUK8 224 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 C15orf40Q8WUR7 153 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 CYGBQ8WWM9 190 aa0.75□□□□□ -2.29
LINC00428-201ENST00000415620 TMEM80Q96HE8 168 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms