RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MDFICQ9P1T7 246 aa7.26□□□□□ -1.25
CD44-206ENST00000415148 ZNF256Q9Y2P7 627 aaPredicted RBP7.26□□□□□ -1.25
CD44-206ENST00000415148 CUBNO60494 3623 aa7.26□□□□□ -1.25
CD44-206ENST00000415148 B4DSR2 109 aa7.25□□□□□ -1.25
CD44-206ENST00000415148 SPINK8P0C7L1 97 aa7.25□□□□□ -1.25
CD44-206ENST00000415148 LGALS3P17931 250 aaKnown RBP7.25□□□□□ -1.25
CD44-206ENST00000415148 EDA2RQ9HAV5 297 aa7.25□□□□□ -1.25
CD44-206ENST00000415148 IGHV3-64A0A075B6Q5 118 aa7.25□□□□□ -1.25
CD44-206ENST00000415148 TMEM223A0PJW6 202 aa7.25□□□□□ -1.25
CD44-206ENST00000415148 I3L3M4 83 aa7.25□□□□□ -1.25
CD44-206ENST00000415148 Q6ZUT4 128 aa7.25□□□□□ -1.25
CD44-206ENST00000415148 SBSPONQ8IVN8 264 aa7.25□□□□□ -1.25
CD44-206ENST00000415148 Q8N1Y9 231 aa7.25□□□□□ -1.25
CD44-206ENST00000415148 C10orf126Q8N4M7 172 aa7.25□□□□□ -1.25
CD44-206ENST00000415148 IGHV4-30-2A0A087WSY4 118 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 ELANEP08246 267 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 ATP5J2P56134 94 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 DSCR9P59020 149 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 ZNF56Q15929 161 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 FAM74A4Q5TZK3 123 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 C20orf203Q8NBC4 194 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 PRO1854Q9UHT4 67 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 TRGV11A0A075B6L2 103 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 ZNF688P0C7X2 276 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 P0DMU3 169 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 FAM231AP0DMU4 169 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 FAM231CP0DMU5 169 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 CRYBA4P53673 196 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 TCTEX1D4Q5JR98 221 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 ANKRD29Q8N6D5 301 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 RAX2Q96IS3 184 aa7.24□□□□□ -1.25
CD44-206ENST00000415148 GEMIN7Q9H840 131 aaKnown RBP7.24□□□□□ -1.25
CD44-206ENST00000415148 ACACBO00763 2458 aa7.23□□□□□ -1.25
CD44-206ENST00000415148 PYGO1Q9Y3Y4 419 aa7.23□□□□□ -1.25
CD44-206ENST00000415148 H7C2G1 150 aa7.23□□□□□ -1.25
CD44-206ENST00000415148 M0QXV9 152 aa7.23□□□□□ -1.25
CD44-206ENST00000415148 PPDPFLQ8WWR9 84 aa7.23□□□□□ -1.25
CD44-206ENST00000415148 PKD1L2Q7Z442 2459 aa7.22□□□□□ -1.25
CD44-206ENST00000415148 RHODO00212 210 aa7.22□□□□□ -1.25
CD44-206ENST00000415148 AVPP01185 164 aa7.22□□□□□ -1.25
CD44-206ENST00000415148 TEN1Q86WV5 123 aa7.22□□□□□ -1.25
CD44-206ENST00000415148 TRAV12-2A0A075B6T6 113 aa7.22□□□□□ -1.25
CD44-206ENST00000415148 A0A0B4J2C4 111 aa7.22□□□□□ -1.25
CD44-206ENST00000415148 A4D1N5 150 aa7.22□□□□□ -1.25
CD44-206ENST00000415148 IGKV3-20P01619 116 aa7.22□□□□□ -1.25
CD44-206ENST00000415148 ZNF22P17026 224 aaPredicted RBP7.21□□□□□ -1.26
CD44-206ENST00000415148 SPINK13Q1W4C9 94 aa7.21□□□□□ -1.26
CD44-206ENST00000415148 PIK3CD-AS1Q5SR53 167 aa7.21□□□□□ -1.26
CD44-206ENST00000415148 RNF183Q96D59 192 aa7.21□□□□□ -1.26
CD44-206ENST00000415148 IGLV4-3A0A075B6K6 122 aa7.2□□□□□ -1.26
CD44-206ENST00000415148 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.2□□□□□ -1.26
CD44-206ENST00000415148 ADARB2-AS1A8MUL3 147 aa7.2□□□□□ -1.26
CD44-206ENST00000415148 A8MWV9 139 aa7.2□□□□□ -1.26
CD44-206ENST00000415148 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.2□□□□□ -1.26
CD44-206ENST00000415148 ITPR1Q14643 2758 aa7.2□□□□□ -1.26
CD44-206ENST00000415148 J3QLI3 93 aa7.2□□□□□ -1.26
CD44-206ENST00000415148 SCGB1C2P0DMR2 95 aa7.2□□□□□ -1.26
CD44-206ENST00000415148 DEFB112Q30KQ8 113 aa7.2□□□□□ -1.26
CD44-206ENST00000415148 TMEM95Q3KNT9 176 aa7.2□□□□□ -1.26
CD44-206ENST00000415148 TRAV2A0A0B4J234 112 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 A8MTW9 85 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 M0R2P5 195 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 IGHV3-33P01772 117 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 IGHV4-59P01825 116 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 TMEM263Q8WUH6 116 aaKnown RBP7.19□□□□□ -1.26
CD44-206ENST00000415148 UBE2E2Q96LR5 201 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 USP24Q9UPU5 2620 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 SPG11Q96JI7 2443 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 C9JAW5 83 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 SYNJ2BPP57105 145 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 MRPS36P82909 103 aaKnown RBP7.19□□□□□ -1.26
CD44-206ENST00000415148 MUSTN1Q8IVN3 82 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 LINC01356Q8N9X3 169 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 ERG28Q9UKR5 140 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 DOPEY2Q9Y3R5 2298 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 CSPG4Q6UVK1 2322 aa7.19□□□□□ -1.26
CD44-206ENST00000415148 UTP20O75691 2785 aaKnown RBP7.19□□□□□ -1.26
CD44-206ENST00000415148 A0A0J9YXV3 536 aa7.18□□□□□ -1.26
CD44-206ENST00000415148 C10orf99Q6UWK7 81 aa7.18□□□□□ -1.26
CD44-206ENST00000415148 Q6ZSV7 163 aa7.18□□□□□ -1.26
CD44-206ENST00000415148 LINC01600Q96MT4 127 aa7.18□□□□□ -1.26
CD44-206ENST00000415148 Q9UF83 564 aa7.18□□□□□ -1.26
CD44-206ENST00000415148 TMEM262E9PQX1 116 aa7.18□□□□□ -1.26
CD44-206ENST00000415148 SLC25A20O43772 301 aa7.18□□□□□ -1.26
CD44-206ENST00000415148 RNASE13Q5GAN3 156 aaKnown RBP7.18□□□□□ -1.26
CD44-206ENST00000415148 FAM104AQ969W3 186 aa7.18□□□□□ -1.26
CD44-206ENST00000415148 PRRC2AP48634 2157 aaKnown RBP7.18□□□□□ -1.26
CD44-206ENST00000415148 CRLF1O75462 422 aa7.17□□□□□ -1.26
CD44-206ENST00000415148 PRM2P04554 102 aa7.17□□□□□ -1.26
CD44-206ENST00000415148 CEMP1Q6PRD7 247 aaPredicted RBP7.17□□□□□ -1.26
CD44-206ENST00000415148 BEX4Q9NWD9 120 aaPredicted RBP7.17□□□□□ -1.26
CD44-206ENST00000415148 ZANQ9Y493 2812 aa7.17□□□□□ -1.26
CD44-206ENST00000415148 A0A0J9YXY3 114 aa7.17□□□□□ -1.26
CD44-206ENST00000415148 A8MZ25 164 aa7.17□□□□□ -1.26
CD44-206ENST00000415148 HOXD3P31249 432 aaPredicted RBP7.17□□□□□ -1.26
CD44-206ENST00000415148 PROK1P58294 105 aa7.17□□□□□ -1.26
CD44-206ENST00000415148 TIMM21Q9BVV7 248 aa7.17□□□□□ -1.26
CD44-206ENST00000415148 TNFRSF18Q9Y5U5 241 aa7.17□□□□□ -1.26
CD44-206ENST00000415148 IGHV3-73A0A0B4J1V6 119 aa7.16□□□□□ -1.26
CD44-206ENST00000415148 IGHV3-30-3P0DP02 117 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms