RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 GAGE4Q13068 117 aa9.15□□□□□ -0.94
CNOT4-204ENST00000414802 GAGE5Q13069 117 aa9.15□□□□□ -0.94
CNOT4-204ENST00000414802 GAGE13Q4V321 117 aa9.15□□□□□ -0.94
CNOT4-204ENST00000414802 PRADC1Q9BSG0 188 aa9.15□□□□□ -0.94
CNOT4-204ENST00000414802 A0A096LPF7 62 aa9.14□□□□□ -0.95
CNOT4-204ENST00000414802 D6R8Y8 96 aa9.14□□□□□ -0.95
CNOT4-204ENST00000414802 RPS10P46783 165 aaKnown RBP9.14□□□□□ -0.95
CNOT4-204ENST00000414802 KIAA1644Q3SXP7 199 aa9.14□□□□□ -0.95
CNOT4-204ENST00000414802 NEXN-AS1Q8NBZ9 246 aa9.14□□□□□ -0.95
CNOT4-204ENST00000414802 COLCA2A8K830 154 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 HLA-DQA1P01909 254 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 FRZBQ92765 325 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 MRAP2Q96G30 205 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 GNB1LQ9BYB4 327 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
CNOT4-204ENST00000414802 DNAH6Q9C0G6 4158 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 H7C1H1 209 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 APCSP02743 223 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 CKS2P33552 79 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 OR10J3Q5JRS4 329 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 ZNRF2Q8NHG8 242 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 ICOSQ9Y6W8 199 aa9.13□□□□□ -0.95
CNOT4-204ENST00000414802 FABP9Q0Z7S8 132 aa9.12□□□□□ -0.95
CNOT4-204ENST00000414802 COX19Q49B96 90 aa9.12□□□□□ -0.95
CNOT4-204ENST00000414802 KLK5Q9Y337 293 aaPredicted RBP9.12□□□□□ -0.95
CNOT4-204ENST00000414802 TRAPPC1Q9Y5R8 145 aa9.12□□□□□ -0.95
CNOT4-204ENST00000414802 TRBV10-1A0A0K0K1A3 114 aa9.11□□□□□ -0.95
CNOT4-204ENST00000414802 MT-ND6P03923 174 aa9.11□□□□□ -0.95
CNOT4-204ENST00000414802 LINC00694P0DN24 101 aa9.11□□□□□ -0.95
CNOT4-204ENST00000414802 NRACQ8N912 160 aa9.11□□□□□ -0.95
CNOT4-204ENST00000414802 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.11□□□□□ -0.95
CNOT4-204ENST00000414802 IGHV3-38A0A0C4DH36 116 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 NPYP01303 97 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 SRIP30626 198 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 RPL36AP83881 106 aaKnown RBP9.1□□□□□ -0.95
CNOT4-204ENST00000414802 NEGR1Q7Z3B1 354 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 ORMDL3Q8N138 153 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 C15orf53Q8NAA6 179 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 RPL36ALQ969Q0 106 aaKnown RBP9.1□□□□□ -0.95
CNOT4-204ENST00000414802 PRELID3AQ96N28 172 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 NIT2Q9NQR4 276 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 APLNQ9ULZ1 77 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 TNFRSF18Q9Y5U5 241 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 SACSQ9NZJ4 4579 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 H3BNG1 76 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 RAB5AP20339 215 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 MRPL23Q16540 153 aaKnown RBP9.1□□□□□ -0.95
CNOT4-204ENST00000414802 CASC10Q5T4H9 136 aa9.1□□□□□ -0.95
CNOT4-204ENST00000414802 TRBV7-3A0A075B6L6 115 aa9.09□□□□□ -0.95
CNOT4-204ENST00000414802 UBE2D3P61077 147 aa9.09□□□□□ -0.95
CNOT4-204ENST00000414802 UBE2D2P62837 147 aa9.09□□□□□ -0.95
CNOT4-204ENST00000414802 C3orf84H3BNL1 204 aa9.08□□□□□ -0.96
CNOT4-204ENST00000414802 TNFRSF6BO95407 300 aa9.08□□□□□ -0.96
CNOT4-204ENST00000414802 DNAJC30Q96LL9 226 aa9.08□□□□□ -0.96
CNOT4-204ENST00000414802 ST20Q9HBF5 79 aa9.08□□□□□ -0.96
CNOT4-204ENST00000414802 SDHAF1A6NFY7 115 aa9.07□□□□□ -0.96
CNOT4-204ENST00000414802 PPBPP02775 128 aa9.07□□□□□ -0.96
CNOT4-204ENST00000414802 ATP6V0E2Q8NHE4 81 aa9.07□□□□□ -0.96
CNOT4-204ENST00000414802 TRBV6-5A0A0K0K1A5 114 aa9.07□□□□□ -0.96
CNOT4-204ENST00000414802 TRGC2P03986 189 aa9.07□□□□□ -0.96
CNOT4-204ENST00000414802 LOC389332A0A1B0GUA5 103 aa9.06□□□□□ -0.96
CNOT4-204ENST00000414802 SUMO2P61956 95 aaKnown RBP9.06□□□□□ -0.96
CNOT4-204ENST00000414802 ALKBH7Q9BT30 221 aaPredicted RBP9.06□□□□□ -0.96
CNOT4-204ENST00000414802 TMEM70Q9BUB7 260 aa9.06□□□□□ -0.96
CNOT4-204ENST00000414802 KMT2AQ03164 3969 aa9.05□□□□□ -0.96
CNOT4-204ENST00000414802 IQCJQ1A5X6 159 aa9.05□□□□□ -0.96
CNOT4-204ENST00000414802 ESRGQ1W209 222 aa9.05□□□□□ -0.96
CNOT4-204ENST00000414802 HYDINQ4G0P3 5121 aa9.05□□□□□ -0.96
CNOT4-204ENST00000414802 PPP1R17O96001 155 aa9.04□□□□□ -0.96
CNOT4-204ENST00000414802 POLR2KP53803 58 aaKnown RBP9.04□□□□□ -0.96
CNOT4-204ENST00000414802 SMIM2Q9BVW6 85 aa9.04□□□□□ -0.96
CNOT4-204ENST00000414802 GTSF1LQ9H1H1 148 aa9.04□□□□□ -0.96
CNOT4-204ENST00000414802 MAP1LC3AQ9H492 121 aa9.04□□□□□ -0.96
CNOT4-204ENST00000414802 PHOX2AO14813 284 aa9.04□□□□□ -0.96
CNOT4-204ENST00000414802 LYPD5Q6UWN5 251 aa9.04□□□□□ -0.96
CNOT4-204ENST00000414802 SH2D6Q7Z4S9 175 aa9.04□□□□□ -0.96
CNOT4-204ENST00000414802 DAZ4Q86SG3 579 aaKnown RBP9.04□□□□□ -0.96
CNOT4-204ENST00000414802 C20orf78Q9BR46 151 aa9.04□□□□□ -0.96
CNOT4-204ENST00000414802 DAZ3Q9NR90 486 aaKnown RBP9.04□□□□□ -0.96
CNOT4-204ENST00000414802 LAMTOR2Q9Y2Q5 125 aa9.04□□□□□ -0.96
CNOT4-204ENST00000414802 PMCHP20382 165 aa9.03□□□□□ -0.96
CNOT4-204ENST00000414802 TCTAP57738 103 aa9.03□□□□□ -0.96
CNOT4-204ENST00000414802 NTM-AS1Q6ZSK4 140 aa9.03□□□□□ -0.96
CNOT4-204ENST00000414802 LINC00588Q9Y4M8 146 aa9.03□□□□□ -0.96
CNOT4-204ENST00000414802 TSHBP01222 138 aa9.02□□□□□ -0.97
CNOT4-204ENST00000414802 COTL1Q14019 142 aa9.02□□□□□ -0.97
CNOT4-204ENST00000414802 UBE2DNLQ8IWF7 75 aa9.02□□□□□ -0.97
CNOT4-204ENST00000414802 TRBV27A0A0K0K1C4 114 aa9.01□□□□□ -0.97
CNOT4-204ENST00000414802 I3L3M4 83 aa9.01□□□□□ -0.97
CNOT4-204ENST00000414802 TCAPO15273 167 aa9.01□□□□□ -0.97
CNOT4-204ENST00000414802 IFI27P40305 119 aaPredicted RBP9.01□□□□□ -0.97
CNOT4-204ENST00000414802 C18orf32Q8TCD1 76 aa9.01□□□□□ -0.97
CNOT4-204ENST00000414802 IGLV2-18A0A075B6J9 118 aa9□□□□□ -0.97
CNOT4-204ENST00000414802 VCYO14598 125 aa9□□□□□ -0.97
CNOT4-204ENST00000414802 CCL18P55774 89 aa9□□□□□ -0.97
CNOT4-204ENST00000414802 TRBV6-8A0A0A6YYG3 113 aa9□□□□□ -0.97
CNOT4-204ENST00000414802 FCER1GP30273 86 aa9□□□□□ -0.97
CNOT4-204ENST00000414802 AMTP48728 403 aa9□□□□□ -0.97
CNOT4-204ENST00000414802 RPL32P62910 135 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms