RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 RASL10AQ92737 203 aa12.47□□□□□ -0.41
PTPRC-206ENST00000413409 IFI27L1Q96BM0 104 aa12.47□□□□□ -0.41
PTPRC-206ENST00000413409 ST20Q9HBF5 79 aa12.47□□□□□ -0.41
PTPRC-206ENST00000413409 SORL1Q92673 2214 aa12.46□□□□□ -0.41
PTPRC-206ENST00000413409 LINC00315P59091 139 aa12.46□□□□□ -0.41
PTPRC-206ENST00000413409 SUMO2P61956 95 aaKnown RBP12.46□□□□□ -0.41
PTPRC-206ENST00000413409 C9orf66Q5T8R8 295 aa12.46□□□□□ -0.41
PTPRC-206ENST00000413409 SPRY2O43597 315 aa12.45□□□□□ -0.42
PTPRC-206ENST00000413409 CMC4P56277 68 aaPredicted RBP12.45□□□□□ -0.42
PTPRC-206ENST00000413409 LAGE3Q14657 143 aa12.45□□□□□ -0.42
PTPRC-206ENST00000413409 ODF3L2Q3SX64 289 aa12.45□□□□□ -0.42
PTPRC-206ENST00000413409 ZMAT4Q9H898 229 aa12.45□□□□□ -0.42
PTPRC-206ENST00000413409 HSBP1L1C9JCN9 74 aa12.44□□□□□ -0.42
PTPRC-206ENST00000413409 RBMY1A1P0DJD3 496 aaKnown RBP12.44□□□□□ -0.42
PTPRC-206ENST00000413409 RBMY1CP0DJD4 496 aa12.44□□□□□ -0.42
PTPRC-206ENST00000413409 RBMY1FQ15415 496 aaKnown RBP12.44□□□□□ -0.42
PTPRC-206ENST00000413409 PIK3CD-AS1Q5SR53 167 aa12.44□□□□□ -0.42
PTPRC-206ENST00000413409 MDFICQ9P1T7 246 aa12.44□□□□□ -0.42
PTPRC-206ENST00000413409 ATP5LO75964 103 aa12.43□□□□□ -0.42
PTPRC-206ENST00000413409 INSP01308 110 aa12.43□□□□□ -0.42
PTPRC-206ENST00000413409 ORMDL2Q53FV1 153 aa12.43□□□□□ -0.42
PTPRC-206ENST00000413409 PTH2Q96A98 100 aa12.43□□□□□ -0.42
PTPRC-206ENST00000413409 MUC4Q99102 2169 aa12.43□□□□□ -0.42
PTPRC-206ENST00000413409 CBY3A6NI87 242 aa12.42□□□□□ -0.42
PTPRC-206ENST00000413409 OR11H12B2RN74 326 aa12.42□□□□□ -0.42
PTPRC-206ENST00000413409 MAJINQ3KP22 176 aa12.42□□□□□ -0.42
PTPRC-206ENST00000413409 FAM110AQ9BQ89 295 aa12.42□□□□□ -0.42
PTPRC-206ENST00000413409 TM2D3Q9BRN9 247 aa12.42□□□□□ -0.42
PTPRC-206ENST00000413409 C2orf88Q9BSF0 95 aa12.42□□□□□ -0.42
PTPRC-206ENST00000413409 KMT2AQ03164 3969 aa12.42□□□□□ -0.42
PTPRC-206ENST00000413409 FXYD7P58549 80 aa12.41□□□□□ -0.42
PTPRC-206ENST00000413409 ZNF415Q09FC8 603 aa12.41□□□□□ -0.42
PTPRC-206ENST00000413409 ZNF124Q15973 351 aa12.41□□□□□ -0.42
PTPRC-206ENST00000413409 SUMO4Q6EEV6 95 aa12.41□□□□□ -0.42
PTPRC-206ENST00000413409 RPL39LQ96EH5 51 aaKnown RBP12.41□□□□□ -0.42
PTPRC-206ENST00000413409 GOLT1BQ9Y3E0 138 aa12.41□□□□□ -0.42
PTPRC-206ENST00000413409 TRBV6-5A0A0K0K1A5 114 aa12.4□□□□□ -0.42
PTPRC-206ENST00000413409 H0Y8G0 127 aa12.4□□□□□ -0.42
PTPRC-206ENST00000413409 M0R143 59 aa12.4□□□□□ -0.42
PTPRC-206ENST00000413409 IGLV1-51P01701 117 aa12.4□□□□□ -0.42
PTPRC-206ENST00000413409 TRPT1Q86TN4 253 aaKnown RBP12.4□□□□□ -0.42
PTPRC-206ENST00000413409 ABCA13Q86UQ4 5058 aa12.4□□□□□ -0.42
PTPRC-206ENST00000413409 AGRNO00468 2067 aa12.4□□□□□ -0.42
PTPRC-206ENST00000413409 STHQ8IWL8 128 aa12.39□□□□□ -0.43
PTPRC-206ENST00000413409 hDV102S1A0JD36 115 aa12.38□□□□□ -0.43
PTPRC-206ENST00000413409 LINC01549A6NIU2 74 aa12.38□□□□□ -0.43
PTPRC-206ENST00000413409 EREGO14944 169 aa12.38□□□□□ -0.43
PTPRC-206ENST00000413409 TCAPO15273 167 aa12.38□□□□□ -0.43
PTPRC-206ENST00000413409 SAP30O75446 220 aa12.38□□□□□ -0.43
PTPRC-206ENST00000413409 NUDT3O95989 172 aa12.38□□□□□ -0.43
PTPRC-206ENST00000413409 CRYGDP07320 174 aa12.38□□□□□ -0.43
PTPRC-206ENST00000413409 HNRNPA3P51991 378 aaKnown RBP12.38□□□□□ -0.43
PTPRC-206ENST00000413409 Q6ZN92 141 aa12.38□□□□□ -0.43
PTPRC-206ENST00000413409 SNHG12Q9BXW3 62 aa12.38□□□□□ -0.43
PTPRC-206ENST00000413409 JPT2Q9H910 190 aa12.38□□□□□ -0.43
PTPRC-206ENST00000413409 A0A087WWL8 130 aa12.37□□□□□ -0.43
PTPRC-206ENST00000413409 G0S2P27469 103 aa12.37□□□□□ -0.43
PTPRC-206ENST00000413409 ZNF876PQ49A33 203 aa12.37□□□□□ -0.43
PTPRC-206ENST00000413409 MRPS16Q9Y3D3 137 aaKnown RBP12.37□□□□□ -0.43
PTPRC-206ENST00000413409 M0R2P5 195 aa12.37□□□□□ -0.43
PTPRC-206ENST00000413409 POLR2KP53803 58 aaKnown RBP12.37□□□□□ -0.43
PTPRC-206ENST00000413409 TOMM6Q96B49 74 aa12.37□□□□□ -0.43
PTPRC-206ENST00000413409 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
PTPRC-206ENST00000413409 PMCHL2Q9BQD1 86 aa12.37□□□□□ -0.43
PTPRC-206ENST00000413409 SPXQ9BT56 116 aa12.37□□□□□ -0.43
PTPRC-206ENST00000413409 CSTL1Q9H114 145 aa12.37□□□□□ -0.43
PTPRC-206ENST00000413409 ODF1Q14990 250 aa12.36□□□□□ -0.43
PTPRC-206ENST00000413409 ZNF56Q15929 161 aa12.36□□□□□ -0.43
PTPRC-206ENST00000413409 A8MWV9 139 aa12.35□□□□□ -0.43
PTPRC-206ENST00000413409 F5H697 171 aa12.35□□□□□ -0.43
PTPRC-206ENST00000413409 M0QY20 66 aa12.35□□□□□ -0.43
PTPRC-206ENST00000413409 VCYO14598 125 aa12.35□□□□□ -0.43
PTPRC-206ENST00000413409 NUTF2P61970 127 aaKnown RBP12.35□□□□□ -0.43
PTPRC-206ENST00000413409 SLC25A34Q6PIV7 304 aa12.35□□□□□ -0.43
PTPRC-206ENST00000413409 C11orf72Q8NBR9 251 aa12.35□□□□□ -0.43
PTPRC-206ENST00000413409 LINC01587Q99440 93 aa12.35□□□□□ -0.43
PTPRC-206ENST00000413409 TRAV12-1A0A0B4J245 112 aa12.34□□□□□ -0.43
PTPRC-206ENST00000413409 TRBV27A0A0K0K1C4 114 aa12.34□□□□□ -0.43
PTPRC-206ENST00000413409 H7C1H1 209 aa12.34□□□□□ -0.43
PTPRC-206ENST00000413409 FAM74A4Q5TZK3 123 aa12.34□□□□□ -0.43
PTPRC-206ENST00000413409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.33□□□□□ -0.44
PTPRC-206ENST00000413409 RHODO00212 210 aa12.33□□□□□ -0.44
PTPRC-206ENST00000413409 PRSS1P07477 247 aa12.33□□□□□ -0.44
PTPRC-206ENST00000413409 SDHAF1A6NFY7 115 aa12.32□□□□□ -0.44
PTPRC-206ENST00000413409 COX8AP10176 69 aa12.32□□□□□ -0.44
PTPRC-206ENST00000413409 UFSP1Q6NVU6 142 aa12.32□□□□□ -0.44
PTPRC-206ENST00000413409 MORN3Q6PF18 240 aaPredicted RBP12.32□□□□□ -0.44
PTPRC-206ENST00000413409 C2orf66Q6UXQ4 117 aa12.32□□□□□ -0.44
PTPRC-206ENST00000413409 IL17DQ8TAD2 202 aa12.32□□□□□ -0.44
PTPRC-206ENST00000413409 KIR2DL4Q99706 377 aa12.32□□□□□ -0.44
PTPRC-206ENST00000413409 C19orf73Q9NVV2 129 aa12.32□□□□□ -0.44
PTPRC-206ENST00000413409 DKK2Q9UBU2 259 aa12.32□□□□□ -0.44
PTPRC-206ENST00000413409 A0A087WX48 190 aa12.31□□□□□ -0.44
PTPRC-206ENST00000413409 DPM2O94777 84 aa12.31□□□□□ -0.44
PTPRC-206ENST00000413409 RHOHQ15669 191 aa12.31□□□□□ -0.44
PTPRC-206ENST00000413409 LINC00476Q8WZB0 136 aa12.31□□□□□ -0.44
PTPRC-206ENST00000413409 SCGB3A1Q96QR1 104 aa12.31□□□□□ -0.44
PTPRC-206ENST00000413409 XCL2Q9UBD3 114 aa12.31□□□□□ -0.44
PTPRC-206ENST00000413409 CYSLTR1Q9Y271 337 aa12.31□□□□□ -0.44
PTPRC-206ENST00000413409 IGKCP01834 107 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms