RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 PSMG3-AS1Q96PY0 264 aa10.5□□□□□ -0.73
CLTCL1-201ENST00000412649 PIMREGQ9BSJ6 248 aa10.5□□□□□ -0.73
CLTCL1-201ENST00000412649 ANKHD1Q8IWZ3 2542 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-201ENST00000412649 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-201ENST00000412649 IGKV2-29A2NJV5 120 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-201ENST00000412649 H3BUX3 64 aa10.5□□□□□ -0.73
CLTCL1-201ENST00000412649 ZNRF2Q8NHG8 242 aa10.5□□□□□ -0.73
CLTCL1-201ENST00000412649 DNAJC30Q96LL9 226 aa10.5□□□□□ -0.73
CLTCL1-201ENST00000412649 MSRB2Q9Y3D2 182 aa10.5□□□□□ -0.73
CLTCL1-201ENST00000412649 RPL36AP83881 106 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-201ENST00000412649 PRR9Q5T870 116 aa10.49□□□□□ -0.73
CLTCL1-201ENST00000412649 RPL36ALQ969Q0 106 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-201ENST00000412649 H7C423 109 aa10.49□□□□□ -0.73
CLTCL1-201ENST00000412649 IGLV4-69A0A075B6H9 119 aa10.48□□□□□ -0.73
CLTCL1-201ENST00000412649 IGKV3D-7A0A0C4DH55 119 aa10.48□□□□□ -0.73
CLTCL1-201ENST00000412649 TSPEAR-AS2P59090 65 aa10.48□□□□□ -0.73
CLTCL1-201ENST00000412649 FAM240AA0A1B0GVK7 77 aa10.48□□□□□ -0.73
CLTCL1-201ENST00000412649 IGIPA6NJ69 53 aa10.48□□□□□ -0.73
CLTCL1-201ENST00000412649 M0QXV9 152 aa10.48□□□□□ -0.73
CLTCL1-201ENST00000412649 TMEM86BQ8N661 226 aa10.48□□□□□ -0.73
CLTCL1-201ENST00000412649 PLA2G2CQ5R387 149 aa10.48□□□□□ -0.73
CLTCL1-201ENST00000412649 C20orf173Q96LM9 149 aa10.48□□□□□ -0.73
CLTCL1-201ENST00000412649 NSUN5P1Q3KNT7 163 aa10.47□□□□□ -0.73
CLTCL1-201ENST00000412649 LST1O00453 97 aa10.47□□□□□ -0.73
CLTCL1-201ENST00000412649 IGHV4OR15-8A0A075B7B6 117 aa10.47□□□□□ -0.73
CLTCL1-201ENST00000412649 A0A087WW49 117 aa10.47□□□□□ -0.73
CLTCL1-201ENST00000412649 IGHV3-16A0A0C4DH30 117 aa10.47□□□□□ -0.73
CLTCL1-201ENST00000412649 TRBV27A0A0K0K1C4 114 aa10.47□□□□□ -0.73
CLTCL1-201ENST00000412649 POLR2KP53803 58 aaKnown RBP10.47□□□□□ -0.73
CLTCL1-201ENST00000412649 BRCA2P51587 3418 aa10.46□□□□□ -0.73
CLTCL1-201ENST00000412649 IGLV4-3A0A075B6K6 122 aa10.46□□□□□ -0.73
CLTCL1-201ENST00000412649 COX7A2LO14548 114 aa10.46□□□□□ -0.73
CLTCL1-201ENST00000412649 ODF3BA8MYP8 253 aa10.46□□□□□ -0.74
CLTCL1-201ENST00000412649 COX6B1P14854 86 aa10.46□□□□□ -0.74
CLTCL1-201ENST00000412649 UNQ9165/PRO28630Q6UXU0 137 aa10.46□□□□□ -0.74
CLTCL1-201ENST00000412649 HOXD3P31249 432 aaPredicted RBP10.46□□□□□ -0.74
CLTCL1-201ENST00000412649 DAZ2Q13117 558 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-201ENST00000412649 DAZ4Q86SG3 579 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-201ENST00000412649 DAZ3Q9NR90 486 aaKnown RBP10.46□□□□□ -0.74
CLTCL1-201ENST00000412649 TINCRA0A1B0GVN0 87 aa10.45□□□□□ -0.74
CLTCL1-201ENST00000412649 LINC00694P0DN24 101 aa10.45□□□□□ -0.74
CLTCL1-201ENST00000412649 RNASE3P12724 160 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-201ENST00000412649 BPESC1Q9GZL8 116 aa10.45□□□□□ -0.74
CLTCL1-201ENST00000412649 RAI1Q7Z5J4 1906 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-201ENST00000412649 TNFRSF13BO14836 293 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-201ENST00000412649 CEMP1Q6PRD7 247 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-201ENST00000412649 LINC01548A6NM66 108 aa10.44□□□□□ -0.74
CLTCL1-201ENST00000412649 F8W735 103 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-201ENST00000412649 TRGV1A0A0A0MS02 117 aa10.44□□□□□ -0.74
CLTCL1-201ENST00000412649 SBSPONQ8IVN8 264 aa10.44□□□□□ -0.74
CLTCL1-201ENST00000412649 TRGV2A0A075B6R0 118 aa10.43□□□□□ -0.74
CLTCL1-201ENST00000412649 RBMY1FQ15415 496 aaKnown RBP10.43□□□□□ -0.74
CLTCL1-201ENST00000412649 TMEM61Q8N0U2 210 aa10.43□□□□□ -0.74
CLTCL1-201ENST00000412649 A0A0J9YX75 114 aa10.43□□□□□ -0.74
CLTCL1-201ENST00000412649 TRBV6-5A0A0K0K1A5 114 aa10.43□□□□□ -0.74
CLTCL1-201ENST00000412649 DEFB131AP59861 70 aa10.43□□□□□ -0.74
CLTCL1-201ENST00000412649 FHL3Q13643 280 aa10.43□□□□□ -0.74
CLTCL1-201ENST00000412649 UBL5Q9BZL1 73 aa10.43□□□□□ -0.74
CLTCL1-201ENST00000412649 VSIG2Q96IQ7 327 aa10.42□□□□□ -0.74
CLTCL1-201ENST00000412649 H3BUA1 57 aa10.42□□□□□ -0.74
CLTCL1-201ENST00000412649 IGHV3-53P01767 116 aa10.42□□□□□ -0.74
CLTCL1-201ENST00000412649 C5orf56Q8N8D9 126 aa10.42□□□□□ -0.74
CLTCL1-201ENST00000412649 hADV29S1A0JD25 119 aa10.42□□□□□ -0.74
CLTCL1-201ENST00000412649 ODF3Q96PU9 254 aa10.42□□□□□ -0.74
CLTCL1-201ENST00000412649 C11orf68Q9H3H3 251 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-201ENST00000412649 VPREB3Q9UKI3 123 aa10.42□□□□□ -0.74
CLTCL1-201ENST00000412649 M0QY20 66 aa10.42□□□□□ -0.74
CLTCL1-201ENST00000412649 ATP5J2P56134 94 aa10.41□□□□□ -0.74
CLTCL1-201ENST00000412649 GPHB5Q86YW7 130 aa10.41□□□□□ -0.74
CLTCL1-201ENST00000412649 LRRC75A-AS1Q8N1F1 130 aa10.41□□□□□ -0.74
CLTCL1-201ENST00000412649 TRBV12-3P01733 135 aa10.41□□□□□ -0.74
CLTCL1-201ENST00000412649 CRYGDP07320 174 aa10.41□□□□□ -0.74
CLTCL1-201ENST00000412649 COX7CP15954 63 aa10.41□□□□□ -0.74
CLTCL1-201ENST00000412649 PFN2P35080 140 aa10.41□□□□□ -0.74
CLTCL1-201ENST00000412649 CLPSL1A2RUU4 121 aa10.4□□□□□ -0.74
CLTCL1-201ENST00000412649 Q9HAA7 133 aa10.4□□□□□ -0.74
CLTCL1-201ENST00000412649 INSP01308 110 aa10.4□□□□□ -0.74
CLTCL1-201ENST00000412649 EBI3Q14213 229 aa10.4□□□□□ -0.74
CLTCL1-201ENST00000412649 C6orf226Q5I0X4 101 aa10.4□□□□□ -0.74
CLTCL1-201ENST00000412649 MALP21145 153 aa10.4□□□□□ -0.75
CLTCL1-201ENST00000412649 SDIM1Q6ZPB5 146 aa10.4□□□□□ -0.75
CLTCL1-201ENST00000412649 NACAE9PAV3 2078 aa10.4□□□□□ -0.75
CLTCL1-201ENST00000412649 H0YGX0 51 aa10.39□□□□□ -0.75
CLTCL1-201ENST00000412649 PRRC2CQ9Y520 2896 aaKnown RBP10.39□□□□□ -0.75
CLTCL1-201ENST00000412649 STHQ8IWL8 128 aa10.39□□□□□ -0.75
CLTCL1-201ENST00000412649 LAMTOR3Q9UHA4 124 aa10.39□□□□□ -0.75
CLTCL1-201ENST00000412649 PPDPFQ9H3Y8 114 aa10.39□□□□□ -0.75
CLTCL1-201ENST00000412649 TMEM243Q9BU79 118 aa10.38□□□□□ -0.75
CLTCL1-201ENST00000412649 SND1-IT1Q9HBX3 110 aa10.38□□□□□ -0.75
CLTCL1-201ENST00000412649 TSHBP01222 138 aa10.38□□□□□ -0.75
CLTCL1-201ENST00000412649 GRNP28799 593 aaKnown RBP10.38□□□□□ -0.75
CLTCL1-201ENST00000412649 LINC00308Q8TCZ7 52 aa10.38□□□□□ -0.75
CLTCL1-201ENST00000412649 ORMDL1Q9P0S3 153 aa10.38□□□□□ -0.75
CLTCL1-201ENST00000412649 A8MZ25 164 aa10.37□□□□□ -0.75
CLTCL1-201ENST00000412649 ZFP36P26651 326 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-201ENST00000412649 Q8N6K4 173 aa10.37□□□□□ -0.75
CLTCL1-201ENST00000412649 C14orf132Q9NPU4 83 aa10.37□□□□□ -0.75
CLTCL1-201ENST00000412649 MKI67P46013 3256 aaKnown RBP10.37□□□□□ -0.75
CLTCL1-201ENST00000412649 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
CLTCL1-201ENST00000412649 CDKN2A-AS1Q9UH64 79 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 223.3 ms