RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 NIT2Q9NQR4 276 aa8.33□□□□□ -1.08
SNRNP35-202ENST00000412157 TRBV6-5A0A0K0K1A5 114 aa8.32□□□□□ -1.08
SNRNP35-202ENST00000412157 M0QY20 66 aa8.32□□□□□ -1.08
SNRNP35-202ENST00000412157 HBDP02042 147 aa8.32□□□□□ -1.08
SNRNP35-202ENST00000412157 SMIM6P0DI80 62 aa8.32□□□□□ -1.08
SNRNP35-202ENST00000412157 RPL32P62910 135 aaKnown RBP8.32□□□□□ -1.08
SNRNP35-202ENST00000412157 PMCHL1Q16048 86 aa8.32□□□□□ -1.08
SNRNP35-202ENST00000412157 NOTCH1P46531 2555 aa8.32□□□□□ -1.08
SNRNP35-202ENST00000412157 IGLV2-18A0A075B6J9 118 aa8.31□□□□□ -1.08
SNRNP35-202ENST00000412157 LINC01546A6NGU7 62 aa8.31□□□□□ -1.08
SNRNP35-202ENST00000412157 LYRM9A8MSI8 78 aa8.31□□□□□ -1.08
SNRNP35-202ENST00000412157 K7EMI3 77 aa8.31□□□□□ -1.08
SNRNP35-202ENST00000412157 LEPROTL1O95214 131 aa8.31□□□□□ -1.08
SNRNP35-202ENST00000412157 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
SNRNP35-202ENST00000412157 LAGE3Q14657 143 aa8.31□□□□□ -1.08
SNRNP35-202ENST00000412157 HSPB8Q9UJY1 196 aa8.31□□□□□ -1.08
SNRNP35-202ENST00000412157 TP53TG1Q9Y2A0 90 aa8.31□□□□□ -1.08
SNRNP35-202ENST00000412157 IGHV4-28A0A0C4DH34 117 aa8.3□□□□□ -1.08
SNRNP35-202ENST00000412157 SDHAF1A6NFY7 115 aa8.3□□□□□ -1.08
SNRNP35-202ENST00000412157 VCYO14598 125 aa8.3□□□□□ -1.08
SNRNP35-202ENST00000412157 ORMDL2Q53FV1 153 aa8.3□□□□□ -1.08
SNRNP35-202ENST00000412157 ZNF479Q96JC4 524 aa8.3□□□□□ -1.08
SNRNP35-202ENST00000412157 DNAJC30Q96LL9 226 aa8.3□□□□□ -1.08
SNRNP35-202ENST00000412157 KIR2DL4Q99706 377 aa8.3□□□□□ -1.08
SNRNP35-202ENST00000412157 TMEM70Q9BUB7 260 aa8.3□□□□□ -1.08
SNRNP35-202ENST00000412157 TNFRSF18Q9Y5U5 241 aa8.3□□□□□ -1.08
SNRNP35-202ENST00000412157 TRGV4A0A0C4DH28 118 aa8.29□□□□□ -1.08
SNRNP35-202ENST00000412157 K7EQD1 137 aa8.29□□□□□ -1.08
SNRNP35-202ENST00000412157 TCAPO15273 167 aa8.29□□□□□ -1.08
SNRNP35-202ENST00000412157 FCER1GP30273 86 aa8.29□□□□□ -1.08
SNRNP35-202ENST00000412157 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
SNRNP35-202ENST00000412157 KRTDAPP60985 99 aa8.29□□□□□ -1.08
SNRNP35-202ENST00000412157 KPRPQ5T749 579 aaPredicted RBP8.29□□□□□ -1.08
SNRNP35-202ENST00000412157 LINC00612Q8N6U2 182 aa8.29□□□□□ -1.08
SNRNP35-202ENST00000412157 TEX48A0A1B0GUV7 120 aa8.28□□□□□ -1.08
SNRNP35-202ENST00000412157 NUDT3O95989 172 aa8.28□□□□□ -1.08
SNRNP35-202ENST00000412157 DEFB130BP0DP73 79 aa8.28□□□□□ -1.08
SNRNP35-202ENST00000412157 DEFB130AP0DP74 79 aa8.28□□□□□ -1.08
SNRNP35-202ENST00000412157 BTF3P20290 206 aaKnown RBP8.28□□□□□ -1.08
SNRNP35-202ENST00000412157 G0S2P27469 103 aa8.28□□□□□ -1.08
SNRNP35-202ENST00000412157 JOSD1Q15040 202 aaPredicted RBP8.28□□□□□ -1.08
SNRNP35-202ENST00000412157 FAM222AQ5U5X8 452 aa8.28□□□□□ -1.08
SNRNP35-202ENST00000412157 Q8NAQ8 132 aa8.28□□□□□ -1.08
SNRNP35-202ENST00000412157 C18orf15Q96N68 181 aa8.28□□□□□ -1.08
SNRNP35-202ENST00000412157 TRBV10-1A0A0K0K1A3 114 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 TRBV27A0A0K0K1C4 114 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 C3orf79P0CE67 100 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 SPART-AS1P0CW21 52 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 P0DMU3 169 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 FAM231AP0DMU4 169 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 FAM231CP0DMU5 169 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 DAD1P61803 113 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 PYY3Q5JQD4 70 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 Q6ZSN1 163 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 NEGR1Q7Z3B1 354 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 NEXN-AS1Q8NBZ9 246 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 MAP1LC3CQ9BXW4 147 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 RETNQ9HD89 108 aa8.27□□□□□ -1.09
SNRNP35-202ENST00000412157 A0A096LNJ9 63 aa8.26□□□□□ -1.09
SNRNP35-202ENST00000412157 I3L3M4 83 aa8.26□□□□□ -1.09
SNRNP35-202ENST00000412157 K7EIL1 84 aa8.26□□□□□ -1.09
SNRNP35-202ENST00000412157 DEFB4AO15263 64 aa8.26□□□□□ -1.09
SNRNP35-202ENST00000412157 SCGB1D1O95968 90 aa8.26□□□□□ -1.09
SNRNP35-202ENST00000412157 RHOHQ15669 191 aa8.26□□□□□ -1.09
SNRNP35-202ENST00000412157 LINC00518Q8N0U6 118 aa8.26□□□□□ -1.09
SNRNP35-202ENST00000412157 C12orf57Q99622 126 aa8.26□□□□□ -1.09
SNRNP35-202ENST00000412157 PRADC1Q9BSG0 188 aa8.26□□□□□ -1.09
SNRNP35-202ENST00000412157 DKK2Q9UBU2 259 aa8.26□□□□□ -1.09
SNRNP35-202ENST00000412157 TRBV6-4A0A1B0GX49 114 aa8.25□□□□□ -1.09
SNRNP35-202ENST00000412157 C20orf202A1L168 122 aa8.25□□□□□ -1.09
SNRNP35-202ENST00000412157 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
SNRNP35-202ENST00000412157 ATP5LO75964 103 aa8.25□□□□□ -1.09
SNRNP35-202ENST00000412157 PRB2P02812 416 aaPredicted RBP8.25□□□□□ -1.09
SNRNP35-202ENST00000412157 DEFB121Q5J5C9 76 aa8.25□□□□□ -1.09
SNRNP35-202ENST00000412157 TRBV7-3A0A075B6L6 115 aa8.24□□□□□ -1.09
SNRNP35-202ENST00000412157 FHL2Q14192 279 aa8.24□□□□□ -1.09
SNRNP35-202ENST00000412157 LINC00173Q6ZV60 143 aa8.24□□□□□ -1.09
SNRNP35-202ENST00000412157 SLC25A29Q8N8R3 303 aa8.24□□□□□ -1.09
SNRNP35-202ENST00000412157 ZNRF2Q8NHG8 242 aa8.24□□□□□ -1.09
SNRNP35-202ENST00000412157 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
SNRNP35-202ENST00000412157 SPATA25Q9BR10 227 aa8.24□□□□□ -1.09
SNRNP35-202ENST00000412157 CYSLTR1Q9Y271 337 aa8.24□□□□□ -1.09
SNRNP35-202ENST00000412157 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 SYS1-DBNDD2H3BUS1 97 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 TSHBP01222 138 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 GAGE1Q13065 139 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 GAGE4Q13068 117 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 GAGE5Q13069 117 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 COTL1Q14019 142 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 PET117Q6UWS5 81 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 C2orf66Q6UXQ4 117 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 TOMM6Q96B49 74 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 C11orf68Q9H3H3 251 aaKnown RBP8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 CELA1Q9UNI1 258 aa8.23□□□□□ -1.09
SNRNP35-202ENST00000412157 H0Y8G0 127 aa8.22□□□□□ -1.09
SNRNP35-202ENST00000412157 ATP5G1P05496 136 aa8.22□□□□□ -1.09
SNRNP35-202ENST00000412157 S100A12P80511 92 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms