RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ST20Q9HBF5 79 aa8.89□□□□□ -0.99
CHMP3-204ENST00000409727 NXT2Q9NPJ8 142 aaKnown RBP8.89□□□□□ -0.99
CHMP3-204ENST00000409727 RHODO00212 210 aa8.89□□□□□ -0.99
CHMP3-204ENST00000409727 SMCPP49901 116 aaPredicted RBP8.89□□□□□ -0.99
CHMP3-204ENST00000409727 DEFB121Q5J5C9 76 aa8.89□□□□□ -0.99
CHMP3-204ENST00000409727 Q8N8P6 123 aa8.89□□□□□ -0.99
CHMP3-204ENST00000409727 SMIM2Q9BVW6 85 aa8.89□□□□□ -0.99
CHMP3-204ENST00000409727 Q9UF83 564 aa8.89□□□□□ -0.99
CHMP3-204ENST00000409727 TRAV4A0A0B4J268 109 aa8.88□□□□□ -0.99
CHMP3-204ENST00000409727 PPP1R17O96001 155 aa8.88□□□□□ -0.99
CHMP3-204ENST00000409727 FAM222AQ5U5X8 452 aa8.88□□□□□ -0.99
CHMP3-204ENST00000409727 C20orf78Q9BR46 151 aa8.88□□□□□ -0.99
CHMP3-204ENST00000409727 NDUFAF3Q9BU61 184 aa8.88□□□□□ -0.99
CHMP3-204ENST00000409727 NOTCH1P46531 2555 aa8.88□□□□□ -0.99
CHMP3-204ENST00000409727 IGLV2-18A0A075B6J9 118 aa8.87□□□□□ -0.99
CHMP3-204ENST00000409727 Q8NAQ8 132 aa8.87□□□□□ -0.99
CHMP3-204ENST00000409727 NIT2Q9NQR4 276 aa8.87□□□□□ -0.99
CHMP3-204ENST00000409727 SDHAF1A6NFY7 115 aa8.87□□□□□ -0.99
CHMP3-204ENST00000409727 H7C1H1 209 aa8.87□□□□□ -0.99
CHMP3-204ENST00000409727 K7EIL1 84 aa8.87□□□□□ -0.99
CHMP3-204ENST00000409727 MIFP14174 115 aa8.87□□□□□ -0.99
CHMP3-204ENST00000409727 ZFP2Q6ZN57 461 aa8.87□□□□□ -0.99
CHMP3-204ENST00000409727 MRAPQ8TCY5 172 aa8.87□□□□□ -0.99
CHMP3-204ENST00000409727 PRSS47A8MTI9 375 aa8.86□□□□□ -0.99
CHMP3-204ENST00000409727 KRTDAPP60985 99 aa8.86□□□□□ -0.99
CHMP3-204ENST00000409727 TMEM70Q9BUB7 260 aa8.86□□□□□ -0.99
CHMP3-204ENST00000409727 A0A096LNJ9 63 aa8.85□□□□□ -0.99
CHMP3-204ENST00000409727 TRGV4A0A0C4DH28 118 aa8.85□□□□□ -0.99
CHMP3-204ENST00000409727 KPRPQ5T749 579 aaPredicted RBP8.85□□□□□ -0.99
CHMP3-204ENST00000409727 LINC00173Q6ZV60 143 aa8.85□□□□□ -0.99
CHMP3-204ENST00000409727 CELA1Q9UNI1 258 aa8.85□□□□□ -0.99
CHMP3-204ENST00000409727 TNFRSF18Q9Y5U5 241 aa8.85□□□□□ -0.99
CHMP3-204ENST00000409727 MGAM2Q2M2H8 2515 aa8.85□□□□□ -0.99
CHMP3-204ENST00000409727 LEPROTL1O95214 131 aa8.85□□□□□ -0.99
CHMP3-204ENST00000409727 BTF3P20290 206 aaKnown RBP8.85□□□□□ -0.99
CHMP3-204ENST00000409727 LAGE3Q14657 143 aa8.85□□□□□ -0.99
CHMP3-204ENST00000409727 SBSPONQ8IVN8 264 aa8.85□□□□□ -0.99
CHMP3-204ENST00000409727 DKK2Q9UBU2 259 aa8.85□□□□□ -0.99
CHMP3-204ENST00000409727 TRBV6-5A0A0K0K1A5 114 aa8.84□□□□□ -0.99
CHMP3-204ENST00000409727 LINC01546A6NGU7 62 aa8.84□□□□□ -0.99
CHMP3-204ENST00000409727 NUDT3O95989 172 aa8.84□□□□□ -0.99
CHMP3-204ENST00000409727 POLR2KP53803 58 aaKnown RBP8.84□□□□□ -0.99
CHMP3-204ENST00000409727 SLC25A29Q8N8R3 303 aa8.84□□□□□ -0.99
CHMP3-204ENST00000409727 NEXN-AS1Q8NBZ9 246 aa8.84□□□□□ -0.99
CHMP3-204ENST00000409727 LYRM9A8MSI8 78 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 H0Y8G0 127 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 VCYO14598 125 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 HBDP02042 147 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 PYY3Q5JQD4 70 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 C18orf15Q96N68 181 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 IGHV3-38A0A0C4DH36 116 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 K7EQD1 137 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 FCER1GP30273 86 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 DAD1P61803 113 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 LINC00612Q8N6U2 182 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 PHLDA1Q8WV24 401 aaPredicted RBP8.83□□□□□ -1
CHMP3-204ENST00000409727 KIR2DL4Q99706 377 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 EDA2RQ9HAV5 297 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 TP53TG1Q9Y2A0 90 aa8.83□□□□□ -1
CHMP3-204ENST00000409727 LOC100131303A0A0U1RQF7 123 aa8.82□□□□□ -1
CHMP3-204ENST00000409727 SCGB1D1O95968 90 aa8.82□□□□□ -1
CHMP3-204ENST00000409727 C3orf79P0CE67 100 aa8.82□□□□□ -1
CHMP3-204ENST00000409727 FHL2Q14192 279 aa8.82□□□□□ -1
CHMP3-204ENST00000409727 ZNRF2Q8NHG8 242 aa8.82□□□□□ -1
CHMP3-204ENST00000409727 TRBV27A0A0K0K1C4 114 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 GAGE12JA6NER3 117 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 I3L3M4 83 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 SPART-AS1P0CW21 52 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 GAGE1Q13065 139 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 GAGE4Q13068 117 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 GAGE5Q13069 117 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 GAGE13Q4V321 117 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 ORMDL2Q53FV1 153 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 CDPF1Q6NVV7 123 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 HSPB8Q9UJY1 196 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 NBEAL1Q6ZS30 2694 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 RPL32P62910 135 aaKnown RBP8.81□□□□□ -1
CHMP3-204ENST00000409727 C12orf57Q99622 126 aa8.81□□□□□ -1
CHMP3-204ENST00000409727 TSHBP01222 138 aa8.8□□□□□ -1
CHMP3-204ENST00000409727 SMIM6P0DI80 62 aa8.8□□□□□ -1
CHMP3-204ENST00000409727 HTN3P15516 51 aa8.8□□□□□ -1
CHMP3-204ENST00000409727 JOSD1Q15040 202 aaPredicted RBP8.8□□□□□ -1
CHMP3-204ENST00000409727 DNAJC30Q96LL9 226 aa8.8□□□□□ -1
CHMP3-204ENST00000409727 HHLA3Q9XRX5 114 aa8.8□□□□□ -1
CHMP3-204ENST00000409727 TRBV7-3A0A075B6L6 115 aa8.79□□□□□ -1
CHMP3-204ENST00000409727 TRBV6-4A0A1B0GX49 114 aa8.79□□□□□ -1
CHMP3-204ENST00000409727 RPL36AP83881 106 aaKnown RBP8.79□□□□□ -1
CHMP3-204ENST00000409727 LINC00518Q8N0U6 118 aa8.79□□□□□ -1
CHMP3-204ENST00000409727 RPL36ALQ969Q0 106 aaKnown RBP8.79□□□□□ -1
CHMP3-204ENST00000409727 MAP1LC3CQ9BXW4 147 aa8.79□□□□□ -1
CHMP3-204ENST00000409727 DNAH3Q8TD57 4116 aa8.79□□□□□ -1
CHMP3-204ENST00000409727 A0A0J9YWU9 116 aa8.79□□□□□ -1
CHMP3-204ENST00000409727 CIDEAO60543 219 aa8.79□□□□□ -1
CHMP3-204ENST00000409727 RHOHQ15669 191 aa8.79□□□□□ -1
CHMP3-204ENST00000409727 C2orf66Q6UXQ4 117 aa8.79□□□□□ -1
CHMP3-204ENST00000409727 SPATA12Q7Z6I5 190 aa8.79□□□□□ -1
CHMP3-204ENST00000409727 TRBV10-1A0A0K0K1A3 114 aa8.78□□□□□ -1
CHMP3-204ENST00000409727 K7EMI3 77 aa8.78□□□□□ -1
CHMP3-204ENST00000409727 RPL39P62891 51 aaKnown RBP8.78□□□□□ -1
CHMP3-204ENST00000409727 IFI27L1Q96BM0 104 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms