RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 PPP1R17O96001 155 aa14.27□□□□□ -0.12
VSX1-203ENST00000409285 APCSP02743 223 aa14.27□□□□□ -0.12
VSX1-203ENST00000409285 GYPEP15421 78 aa14.27□□□□□ -0.12
VSX1-203ENST00000409285 TCTAP57738 103 aa14.27□□□□□ -0.12
VSX1-203ENST00000409285 NEXN-AS1Q8NBZ9 246 aa14.27□□□□□ -0.12
VSX1-203ENST00000409285 MRPL18Q9H0U6 180 aaKnown RBP14.27□□□□□ -0.12
VSX1-203ENST00000409285 TRBV7-3A0A075B6L6 115 aa14.26□□□□□ -0.13
VSX1-203ENST00000409285 P0DMU3 169 aa14.26□□□□□ -0.13
VSX1-203ENST00000409285 FAM231AP0DMU4 169 aa14.26□□□□□ -0.13
VSX1-203ENST00000409285 FAM231CP0DMU5 169 aa14.26□□□□□ -0.13
VSX1-203ENST00000409285 CKS2P33552 79 aa14.26□□□□□ -0.13
VSX1-203ENST00000409285 ORMDL3Q8N138 153 aa14.26□□□□□ -0.13
VSX1-203ENST00000409285 Q9UF83 564 aa14.26□□□□□ -0.13
VSX1-203ENST00000409285 TRBV6-5A0A0K0K1A5 114 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 D6R8Y8 96 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 TRGC2P03986 189 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 RPL36AP83881 106 aaKnown RBP14.25□□□□□ -0.13
VSX1-203ENST00000409285 FABP9Q0Z7S8 132 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 MRPL23Q16540 153 aaKnown RBP14.25□□□□□ -0.13
VSX1-203ENST00000409285 SH2D6Q7Z4S9 175 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 NRACQ8N912 160 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 RPL36ALQ969Q0 106 aaKnown RBP14.25□□□□□ -0.13
VSX1-203ENST00000409285 LAMTOR2Q9Y2Q5 125 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 ICOSQ9Y6W8 199 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 PLECQ15149 4684 aaKnown RBP14.25□□□□□ -0.13
VSX1-203ENST00000409285 A0A096LPF7 62 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 LOC100131303A0A0U1RQF7 123 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 IGLL5B9A064 214 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 PHOX2AO14813 284 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 GAS8-AS1O95177 125 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 LYSTQ99698 3801 aa14.25□□□□□ -0.13
VSX1-203ENST00000409285 NCR2O95944 276 aa14.24□□□□□ -0.13
VSX1-203ENST00000409285 RPL39LQ96EH5 51 aaKnown RBP14.24□□□□□ -0.13
VSX1-203ENST00000409285 SMKR1H3BMG3 65 aa14.23□□□□□ -0.13
VSX1-203ENST00000409285 SRIP30626 198 aa14.23□□□□□ -0.13
VSX1-203ENST00000409285 UBE2D3P61077 147 aa14.23□□□□□ -0.13
VSX1-203ENST00000409285 UBE2D2P62837 147 aa14.23□□□□□ -0.13
VSX1-203ENST00000409285 OR10J3Q5JRS4 329 aa14.23□□□□□ -0.13
VSX1-203ENST00000409285 ZNRF2Q8NHG8 242 aa14.22□□□□□ -0.13
VSX1-203ENST00000409285 TNFRSF18Q9Y5U5 241 aa14.22□□□□□ -0.13
VSX1-203ENST00000409285 GAGE12JA6NER3 117 aa14.21□□□□□ -0.13
VSX1-203ENST00000409285 C1orf196B1AJZ1 125 aa14.21□□□□□ -0.13
VSX1-203ENST00000409285 TNFRSF6BO95407 300 aa14.21□□□□□ -0.13
VSX1-203ENST00000409285 GAGE1Q13065 139 aa14.21□□□□□ -0.13
VSX1-203ENST00000409285 GAGE4Q13068 117 aa14.21□□□□□ -0.13
VSX1-203ENST00000409285 GAGE5Q13069 117 aa14.21□□□□□ -0.13
VSX1-203ENST00000409285 GAGE13Q4V321 117 aa14.21□□□□□ -0.13
VSX1-203ENST00000409285 PRELID3AQ96N28 172 aa14.21□□□□□ -0.13
VSX1-203ENST00000409285 C20orf78Q9BR46 151 aa14.21□□□□□ -0.13
VSX1-203ENST00000409285 RPL32P62910 135 aaKnown RBP14.2□□□□□ -0.14
VSX1-203ENST00000409285 KIAA1644Q3SXP7 199 aa14.2□□□□□ -0.14
VSX1-203ENST00000409285 CASC10Q5T4H9 136 aa14.2□□□□□ -0.14
VSX1-203ENST00000409285 ZFAND6Q6FIF0 208 aa14.2□□□□□ -0.14
VSX1-203ENST00000409285 NEGR1Q7Z3B1 354 aa14.2□□□□□ -0.14
VSX1-203ENST00000409285 DAZ4Q86SG3 579 aaKnown RBP14.2□□□□□ -0.14
VSX1-203ENST00000409285 DAZ3Q9NR90 486 aaKnown RBP14.2□□□□□ -0.14
VSX1-203ENST00000409285 APLNQ9ULZ1 77 aa14.2□□□□□ -0.14
VSX1-203ENST00000409285 NUDT3O95989 172 aa14.19□□□□□ -0.14
VSX1-203ENST00000409285 NPYP01303 97 aa14.19□□□□□ -0.14
VSX1-203ENST00000409285 SUMO2P61956 95 aaKnown RBP14.19□□□□□ -0.14
VSX1-203ENST00000409285 ST20Q9HBF5 79 aa14.19□□□□□ -0.14
VSX1-203ENST00000409285 SDHAF1A6NFY7 115 aa14.18□□□□□ -0.14
VSX1-203ENST00000409285 PRSS47A8MTI9 375 aa14.18□□□□□ -0.14
VSX1-203ENST00000409285 ALKBH7Q9BT30 221 aaPredicted RBP14.18□□□□□ -0.14
VSX1-203ENST00000409285 TMEM70Q9BUB7 260 aa14.18□□□□□ -0.14
VSX1-203ENST00000409285 TMA7Q9Y2S6 64 aaKnown RBP14.18□□□□□ -0.14
VSX1-203ENST00000409285 TRBV27A0A0K0K1C4 114 aa14.18□□□□□ -0.14
VSX1-203ENST00000409285 POLR2KP53803 58 aaKnown RBP14.18□□□□□ -0.14
VSX1-203ENST00000409285 TIRAPP58753 221 aa14.18□□□□□ -0.14
VSX1-203ENST00000409285 ATP6V0E2Q8NHE4 81 aa14.18□□□□□ -0.14
VSX1-203ENST00000409285 RAB5BP61020 215 aa14.17□□□□□ -0.14
VSX1-203ENST00000409285 GTSF1LQ9H1H1 148 aa14.16□□□□□ -0.14
VSX1-203ENST00000409285 SMIM2Q9BVW6 85 aa14.15□□□□□ -0.14
VSX1-203ENST00000409285 TMEM97Q5BJF2 176 aa14.14□□□□□ -0.15
VSX1-203ENST00000409285 MAP1LC3AQ9H492 121 aa14.14□□□□□ -0.15
VSX1-203ENST00000409285 I3L3M4 83 aa14.13□□□□□ -0.15
VSX1-203ENST00000409285 VCYO14598 125 aa14.13□□□□□ -0.15
VSX1-203ENST00000409285 LYPD5Q6UWN5 251 aa14.13□□□□□ -0.15
VSX1-203ENST00000409285 HIST1H2BKO60814 126 aa14.12□□□□□ -0.15
VSX1-203ENST00000409285 HIST1H2BJP06899 126 aa14.12□□□□□ -0.15
VSX1-203ENST00000409285 HIST1H2BOP23527 126 aa14.12□□□□□ -0.15
VSX1-203ENST00000409285 HIST1H2BBP33778 126 aa14.12□□□□□ -0.15
VSX1-203ENST00000409285 HIST1H2BDP58876 126 aa14.12□□□□□ -0.15
VSX1-203ENST00000409285 HIST1H2BCP62807 126 aa14.12□□□□□ -0.15
VSX1-203ENST00000409285 HIST2H2BEQ16778 126 aa14.12□□□□□ -0.15
VSX1-203ENST00000409285 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.12□□□□□ -0.15
VSX1-203ENST00000409285 HIST1H2BHQ93079 126 aa14.12□□□□□ -0.15
VSX1-203ENST00000409285 HIST1H2BNQ99877 126 aa14.12□□□□□ -0.15
VSX1-203ENST00000409285 HIST1H2BMQ99879 126 aa14.12□□□□□ -0.15
VSX1-203ENST00000409285 IGLV2-18A0A075B6J9 118 aa14.11□□□□□ -0.15
VSX1-203ENST00000409285 IGHV3-38A0A0C4DH36 116 aa14.11□□□□□ -0.15
VSX1-203ENST00000409285 TCAPO15273 167 aa14.11□□□□□ -0.15
VSX1-203ENST00000409285 PMCHP20382 165 aa14.11□□□□□ -0.15
VSX1-203ENST00000409285 ESRGQ1W209 222 aa14.11□□□□□ -0.15
VSX1-203ENST00000409285 C18orf32Q8TCD1 76 aa14.11□□□□□ -0.15
VSX1-203ENST00000409285 CCL18P55774 89 aa14.1□□□□□ -0.15
VSX1-203ENST00000409285 COTL1Q14019 142 aa14.1□□□□□ -0.15
VSX1-203ENST00000409285 KIR2DL4Q99706 377 aa14.1□□□□□ -0.15
VSX1-203ENST00000409285 NXT2Q9NPJ8 142 aaKnown RBP14.1□□□□□ -0.15
VSX1-203ENST00000409285 KMT2CQ8NEZ4 4911 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms