RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 PIMREGQ9BSJ6 248 aa9.83□□□□□ -0.84
PTPRN-202ENST00000409251 RNF223E7ERA6 249 aa9.83□□□□□ -0.84
PTPRN-202ENST00000409251 LY6LH3BQJ8 138 aa9.83□□□□□ -0.84
PTPRN-202ENST00000409251 C10orf126Q8N4M7 172 aa9.83□□□□□ -0.84
PTPRN-202ENST00000409251 ATP6V0E1O15342 81 aa9.82□□□□□ -0.84
PTPRN-202ENST00000409251 IGHG4P01861 327 aa9.82□□□□□ -0.84
PTPRN-202ENST00000409251 TSPEAR-AS2P59090 65 aa9.82□□□□□ -0.84
PTPRN-202ENST00000409251 AVPP01185 164 aa9.82□□□□□ -0.84
PTPRN-202ENST00000409251 RPL32P62910 135 aaKnown RBP9.82□□□□□ -0.84
PTPRN-202ENST00000409251 Q8N1Y9 231 aa9.82□□□□□ -0.84
PTPRN-202ENST00000409251 GATD1Q8NB37 220 aa9.82□□□□□ -0.84
PTPRN-202ENST00000409251 ELANEP08246 267 aa9.82□□□□□ -0.84
PTPRN-202ENST00000409251 COX6B1P14854 86 aa9.82□□□□□ -0.84
PTPRN-202ENST00000409251 CLEC2BQ92478 149 aa9.82□□□□□ -0.84
PTPRN-202ENST00000409251 J3QQQ9 107 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 NPFFO15130 113 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 MUSTN1Q8IVN3 82 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 SIRPDQ9H106 197 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 H3BUX3 64 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 M0R1W7 72 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 CRYGBP07316 175 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 PSMG4Q5JS54 123 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 OR10J6PQ8NGY7 276 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 IGLV2-18A0A075B6J9 118 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 A0A0J9YY99 117 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 CD7P09564 240 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 BLCAPP62952 87 aa9.81□□□□□ -0.84
PTPRN-202ENST00000409251 NEXN-AS1Q8NBZ9 246 aa9.8□□□□□ -0.84
PTPRN-202ENST00000409251 DPH3P1Q9H4G8 78 aa9.8□□□□□ -0.84
PTPRN-202ENST00000409251 IGLV11-55A0A075B6I3 123 aa9.8□□□□□ -0.84
PTPRN-202ENST00000409251 LINC01559Q495D7 138 aa9.8□□□□□ -0.84
PTPRN-202ENST00000409251 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
PTPRN-202ENST00000409251 IGHV7-81A0A0B4J1V7 117 aa9.8□□□□□ -0.84
PTPRN-202ENST00000409251 A8MZ25 164 aa9.8□□□□□ -0.84
PTPRN-202ENST00000409251 UBR5O95071 2799 aaPredicted RBP9.79□□□□□ -0.84
PTPRN-202ENST00000409251 IGHV7-4-1A0A0J9YVY3 117 aa9.79□□□□□ -0.84
PTPRN-202ENST00000409251 TRAV12-2A0A075B6T6 113 aa9.78□□□□□ -0.84
PTPRN-202ENST00000409251 TRBV6-1A0A0K0K1D8 114 aa9.78□□□□□ -0.84
PTPRN-202ENST00000409251 ODF3BA8MYP8 253 aa9.78□□□□□ -0.84
PTPRN-202ENST00000409251 BUB3O43684 328 aa9.78□□□□□ -0.84
PTPRN-202ENST00000409251 CEMP1Q6PRD7 247 aaPredicted RBP9.78□□□□□ -0.84
PTPRN-202ENST00000409251 CITED1Q99966 193 aa9.78□□□□□ -0.84
PTPRN-202ENST00000409251 SDHAF1A6NFY7 115 aa9.78□□□□□ -0.84
PTPRN-202ENST00000409251 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
PTPRN-202ENST00000409251 Q8N9W7 124 aa9.78□□□□□ -0.84
PTPRN-202ENST00000409251 SLC50A1Q9BRV3 221 aa9.78□□□□□ -0.84
PTPRN-202ENST00000409251 NIPBLQ6KC79 2804 aaeCLIP9.78□□□□□ -0.84
PTPRN-202ENST00000409251 C8orf31Q8N9H6 132 aa9.78□□□□□ -0.84
PTPRN-202ENST00000409251 A0A0J9YXV3 536 aa9.77□□□□□ -0.84
PTPRN-202ENST00000409251 UBE2E1P51965 193 aa9.77□□□□□ -0.84
PTPRN-202ENST00000409251 TOMM6Q96B49 74 aa9.77□□□□□ -0.84
PTPRN-202ENST00000409251 H3BMM0 161 aa9.77□□□□□ -0.85
PTPRN-202ENST00000409251 EEF1AKMT3Q96AZ1 226 aa9.77□□□□□ -0.85
PTPRN-202ENST00000409251 UBE2WQ96B02 151 aa9.77□□□□□ -0.85
PTPRN-202ENST00000409251 RPL13AP40429 203 aaKnown RBP9.77□□□□□ -0.85
PTPRN-202ENST00000409251 C10orf105Q8TEF2 133 aa9.77□□□□□ -0.85
PTPRN-202ENST00000409251 UBE2D1P51668 147 aa9.76□□□□□ -0.85
PTPRN-202ENST00000409251 PMVKQ15126 192 aa9.76□□□□□ -0.85
PTPRN-202ENST00000409251 LINC01620Q4KN68 170 aa9.76□□□□□ -0.85
PTPRN-202ENST00000409251 UNC79Q9P2D8 2635 aa9.76□□□□□ -0.85
PTPRN-202ENST00000409251 NHLRC4P0CG21 123 aaPredicted RBP9.76□□□□□ -0.85
PTPRN-202ENST00000409251 PF4V1P10720 104 aa9.76□□□□□ -0.85
PTPRN-202ENST00000409251 C10orf99Q6UWK7 81 aa9.76□□□□□ -0.85
PTPRN-202ENST00000409251 ZNF575Q86XF7 245 aa9.76□□□□□ -0.85
PTPRN-202ENST00000409251 PIFOQ8TCI5 191 aa9.76□□□□□ -0.85
PTPRN-202ENST00000409251 KNCNA6PVL3 124 aa9.75□□□□□ -0.85
PTPRN-202ENST00000409251 ID1P41134 155 aa9.75□□□□□ -0.85
PTPRN-202ENST00000409251 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
PTPRN-202ENST00000409251 ATXN8Q156A1 80 aa9.75□□□□□ -0.85
PTPRN-202ENST00000409251 C11orf44Q8N8P7 122 aa9.75□□□□□ -0.85
PTPRN-202ENST00000409251 ZNRF2Q8NHG8 242 aa9.75□□□□□ -0.85
PTPRN-202ENST00000409251 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
PTPRN-202ENST00000409251 UBE2D3P61077 147 aa9.75□□□□□ -0.85
PTPRN-202ENST00000409251 UBE2D2P62837 147 aa9.75□□□□□ -0.85
PTPRN-202ENST00000409251 FAM236AA0A1B0GUQ0 79 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 FAM236BA0A1B0GV22 79 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 IGHV3-30P01768 117 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 MSMBP08118 114 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 IGHV3-30-5P0DP03 117 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 VCX2Q9H322 139 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 KLK9Q9UKQ9 250 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 TRBV12-3P01733 135 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 C20orf173Q96LM9 149 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 IGHV1-69DA0A0B4J2H0 117 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 IGHV1-69P01742 117 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 COX6CP09669 75 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 KHDC1LQ5JSQ8 128 aa9.74□□□□□ -0.85
PTPRN-202ENST00000409251 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
PTPRN-202ENST00000409251 RHODO00212 210 aa9.73□□□□□ -0.85
PTPRN-202ENST00000409251 IGHV4-59P01825 116 aa9.73□□□□□ -0.85
PTPRN-202ENST00000409251 ZNF22P17026 224 aaPredicted RBP9.73□□□□□ -0.85
PTPRN-202ENST00000409251 ZNF876PQ49A33 203 aa9.73□□□□□ -0.85
PTPRN-202ENST00000409251 KLK5Q9Y337 293 aaPredicted RBP9.73□□□□□ -0.85
PTPRN-202ENST00000409251 TRIAP1O43715 76 aa9.73□□□□□ -0.85
PTPRN-202ENST00000409251 UNQ9165/PRO28630Q6UXU0 137 aa9.73□□□□□ -0.85
PTPRN-202ENST00000409251 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
PTPRN-202ENST00000409251 TEP1Q99973 2627 aaKnown RBP9.72□□□□□ -0.85
PTPRN-202ENST00000409251 CLPSL1A2RUU4 121 aa9.72□□□□□ -0.85
PTPRN-202ENST00000409251 IGHV3-33P01772 117 aa9.72□□□□□ -0.85
PTPRN-202ENST00000409251 CRYGDP07320 174 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms