RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 LINC00694P0DN24 101 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 TMEM258P61165 79 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 NPC2P61916 151 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 DAZ2Q13117 558 aaKnown RBP3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 S100A7L2Q5SY68 101 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 SDIM1Q6ZPB5 146 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 DAZ4Q86SG3 579 aaKnown RBP3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 DEFB123Q8N688 67 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 RNF152Q8N8N0 203 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 Q8NA96 180 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 DEFB104AQ8WTQ1 72 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 DUX5Q96PT3 197 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 DAZ3Q9NR90 486 aaKnown RBP3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 ZNF580Q9UK33 172 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 UBE2D4Q9Y2X8 147 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 MYO9BQ13459 2157 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 NAV3Q8IVL0 2385 aa3.33□□□□□ -1.88
HDGFP1-201ENST00000405943 DNAJC13O75165 2243 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 TMEM89A2RUT3 159 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 H0YGX0 51 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 CCL21O00585 134 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 IGHV3-11P01762 117 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 CRPP02741 224 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 MALP21145 153 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 RPL18AQ02543 176 aaKnown RBP3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 HIST2H2BCQ6DN03 193 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 HIST2H2BDQ6DRA6 164 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 Q6JHZ5 121 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 C5orf38Q86SI9 138 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 UBTD1Q9HAC8 227 aa3.32□□□□□ -1.88
HDGFP1-201ENST00000405943 UNC80Q8N2C7 3258 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 SDK1Q7Z5N4 2213 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 TRAV12-2A0A075B6T6 113 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 SMIM9A6NGZ8 99 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 K7EQG2 157 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 IGLV1-40P01703 118 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 TRBV12-3P01733 135 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 RPL28P46779 137 aaKnown RBP3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 DEFB1P60022 68 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 HIST1H4AP62805 103 aaKnown RBP3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 KLRB1Q12918 225 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 SPINK13Q1W4C9 94 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 ATP5EP2Q5VTU8 51 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 FAM19A3Q7Z5A8 133 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 PRIMA1Q86XR5 153 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 CITED2Q99967 270 aaPredicted RBP3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 CHCHD7Q9BUK0 85 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 Q9H8V8 135 aa3.31□□□□□ -1.88
HDGFP1-201ENST00000405943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 IGLV5-39A0A0G2JS06 123 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 IGKV2-29A2NJV5 120 aaPredicted RBP3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 RBMY1BA6NDE4 496 aaKnown RBP3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 A6NDX4 124 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 RBMY1EA6NEQ0 496 aaKnown RBP3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 PCNX2A6NKB5 2137 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 NDUFC2-KCTD14E9PQ53 114 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 WIPF1O43516 503 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 IGKV3-20P01619 116 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 IGHV3-53P01767 116 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 RBMY1DP0C7P1 496 aaKnown RBP3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 RBMY1A1P0DJD3 496 aaKnown RBP3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 RBMY1CP0DJD4 496 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 LMO4P61968 165 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 CEMP1Q6PRD7 247 aaPredicted RBP3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 SMCR5Q8TEV8 140 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 LINC00467Q9BRT7 94 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 CDKN2A-AS1Q9UH64 79 aa3.3□□□□□ -1.88
HDGFP1-201ENST00000405943 IGHV3-73A0A0B4J1V6 119 aa3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 H3BUX3 64 aa3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 NDUFC2O95298 119 aa3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 LY6EQ16553 131 aa3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 BEAN1Q3B7T3 259 aa3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 Q6ZSV7 163 aa3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 FAM19A5Q7Z5A7 132 aaPredicted RBP3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 C3orf56Q8N813 242 aa3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 BPESC1Q9GZL8 116 aa3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 LAMA3Q16787 3333 aa3.29□□□□□ -1.88
HDGFP1-201ENST00000405943 MED13Q9UHV7 2174 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 LAMA2P24043 3122 aaKnown RBP3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 TRAV13-1A0A0B4J241 112 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 TRBV10-1A0A0K0K1A3 114 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 LOC107984640A0A0U1RRK4 108 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 hADV29S1A0JD25 119 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 A8MZ25 164 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 SMIM1B2RUZ4 78 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 JMJD7-PLA2G4BH0Y9G9 81 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 UBE2L6O14933 153 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 INSP01308 110 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 HTN1P15515 57 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 GRNP28799 593 aaKnown RBP3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 SYNJ2BPP57105 145 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 RPL36AP83881 106 aaKnown RBP3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 CFHR3Q02985 330 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 LINC00242Q5T6M2 205 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 RPL36ALQ969Q0 106 aaKnown RBP3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 FAM104AQ969W3 186 aa3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 ZNF625Q96I27 306 aaPredicted RBP3.28□□□□□ -1.88
HDGFP1-201ENST00000405943 C2orf48Q96LS8 159 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms