RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 DEFB131AP59861 70 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 PPDPFQ9H3Y8 114 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 MDFICQ9P1T7 246 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 VPREB3Q9UKI3 123 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 HLA-DRB4X5D2U9 266 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 IGSF10Q6WRI0 2623 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 VCYO14598 125 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 SLC25A16P16260 332 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 KLHL30-AS1Q8NEE0 82 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 PRADC1Q9BSG0 188 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 IGLV2-18A0A075B6J9 118 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 A0A1W2PRX2 142 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 HOXA3O43365 443 aaPredicted RBP5.77□□□□□ -1.49
HDAC9-201ENST00000401921 DSCR9P59020 149 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 C5orf47Q569G3 176 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 SUMO4Q6EEV6 95 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 CEND1Q8N111 149 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 IGHV4OR15-8A0A075B7B6 117 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 A0A087WW49 117 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 SNCGO76070 127 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 HOXD3P31249 432 aaPredicted RBP5.77□□□□□ -1.49
HDAC9-201ENST00000401921 H7C2G1 150 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 SCGB1C2P0DMR2 95 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 Q8N1Y9 231 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 BAALCQ8WXS3 180 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 PSMG3-AS1Q96PY0 264 aa5.77□□□□□ -1.49
HDAC9-201ENST00000401921 MUC4Q99102 2169 aa5.76□□□□□ -1.49
HDAC9-201ENST00000401921 JMJD1CQ15652 2540 aa5.76□□□□□ -1.49
HDAC9-201ENST00000401921 IGHV1OR15-1A0A075B7D0 117 aa5.76□□□□□ -1.49
HDAC9-201ENST00000401921 MYMXA0A1B0GTQ4 84 aa5.76□□□□□ -1.49
HDAC9-201ENST00000401921 SLURP1P55000 103 aa5.76□□□□□ -1.49
HDAC9-201ENST00000401921 VCX2Q9H322 139 aa5.76□□□□□ -1.49
HDAC9-201ENST00000401921 SOCS3O14543 225 aa5.76□□□□□ -1.49
HDAC9-201ENST00000401921 IGLV1-40P01703 118 aa5.76□□□□□ -1.49
HDAC9-201ENST00000401921 NDUFV3P56181 108 aaKnown RBP5.76□□□□□ -1.49
HDAC9-201ENST00000401921 MEIG1Q5JSS6 88 aa5.76□□□□□ -1.49
HDAC9-201ENST00000401921 TOMM6Q96B49 74 aa5.76□□□□□ -1.49
HDAC9-201ENST00000401921 IGHV4-4A0A075B6R2 117 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 K7EMT4 169 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 IFITM1P13164 125 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 LGALS3P17931 250 aaKnown RBP5.75□□□□□ -1.49
HDAC9-201ENST00000401921 ZFP2Q6ZN57 461 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 CELSR2Q9HCU4 2923 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 TMEM262E9PQX1 116 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 PRM2P04554 102 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 CRIP2P52943 208 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-201ENST00000401921 C12orf74Q32Q52 190 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 C19orf54Q5BKX5 351 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 C3orf56Q8N813 242 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 ATP6V0E2Q8NHE4 81 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 DCANP1Q8TF63 244 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 PPDPFLQ8WWR9 84 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 LINC01587Q99440 93 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 OPRPNQ99935 248 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-201ENST00000401921 NHLRC4P0CG21 123 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-201ENST00000401921 PSMB8P28062 276 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 FHL3Q13643 280 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 PMVKQ15126 192 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 PTH2Q96A98 100 aa5.75□□□□□ -1.49
HDAC9-201ENST00000401921 A0A0J9YX75 114 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 C11orf86A6NJI1 115 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 PRSS2P07478 247 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 PSMB2P49721 201 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 Q1RN00 199 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 PHLDA1Q8WV24 401 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-201ENST00000401921 PRO0461Q9UI25 63 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 LGALS1P09382 135 aaKnown RBP5.74□□□□□ -1.49
HDAC9-201ENST00000401921 RRN3P1Q2M238 152 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 RNASE13Q5GAN3 156 aaKnown RBP5.74□□□□□ -1.49
HDAC9-201ENST00000401921 DGAT2L7PQ6IED9 249 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 NFE4Q86UQ8 179 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 NEXN-AS1Q8NBZ9 246 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 DLX4Q92988 240 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-201ENST00000401921 ZMAT4Q9H898 229 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 HIGD1BQ9P298 99 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 TEX15Q9BXT5 2789 aa5.74□□□□□ -1.49
HDAC9-201ENST00000401921 A4D1N5 150 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 C18orf65Q6ZTR6 163 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 Q96MF0 132 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 FN1P02751 2386 aaKnown RBP5.73□□□□□ -1.49
HDAC9-201ENST00000401921 TRGV11A0A075B6L2 103 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 TRAV12-1A0A0B4J245 112 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 IGHV3-16A0A0C4DH30 117 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 OXLD1Q5BKU9 147 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 PAPPA-AS1Q5QFB9 102 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 APRG1Q8IVJ8 170 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 UBE2E2Q96LR5 201 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 CSDC2Q9Y534 153 aaKnown RBP5.73□□□□□ -1.49
HDAC9-201ENST00000401921 LINC01549A6NIU2 74 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 KLLNB2CW77 178 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 RHODO00212 210 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 ELANEP08246 267 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 MED14OSP0DP75 135 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 KLK9Q2XQG4 91 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 SPANXA1Q9NS26 97 aa5.73□□□□□ -1.49
HDAC9-201ENST00000401921 TRAV2A0A0B4J234 112 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 K7EQG2 157 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 P0DMU3 169 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 FAM231AP0DMU4 169 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 FAM231CP0DMU5 169 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms