RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 KTN1-AS1Q86SY8 53 aa4.59□□□□□ -1.67
TRAPPC13-202ENST00000399438 ZNF702PQ9H963 129 aa4.59□□□□□ -1.67
TRAPPC13-202ENST00000399438 F11RQ9Y624 299 aaKnown RBP4.59□□□□□ -1.67
TRAPPC13-202ENST00000399438 C9JCJ5 164 aa4.59□□□□□ -1.68
TRAPPC13-202ENST00000399438 SPINK8P0C7L1 97 aa4.59□□□□□ -1.68
TRAPPC13-202ENST00000399438 C3orf79P0CE67 100 aa4.59□□□□□ -1.68
TRAPPC13-202ENST00000399438 PSMB8P28062 276 aa4.59□□□□□ -1.68
TRAPPC13-202ENST00000399438 NDUFV3P56181 108 aaKnown RBP4.59□□□□□ -1.68
TRAPPC13-202ENST00000399438 YPEL3P61236 119 aaPredicted RBP4.59□□□□□ -1.68
TRAPPC13-202ENST00000399438 BPESC1Q9GZL8 116 aa4.59□□□□□ -1.68
TRAPPC13-202ENST00000399438 NBPF19A0A087WUL8 3843 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 LST1O00453 97 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 TCRAP04437 139 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 RBMY1FQ15415 496 aaKnown RBP4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 COA6Q5JTJ3 125 aaKnown RBP4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 C18orf32Q8TCD1 76 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 TSKUQ8WUA8 353 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 ITLN2Q8WWU7 325 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 MIEN1Q9BRT3 115 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 VAMP8Q9BV40 100 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 MRPL32Q9BYC8 188 aaKnown RBP4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 CHD6Q8TD26 2715 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 HIVEP2P31629 2446 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 I3L2K1 104 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 ARMS2P0C7Q2 107 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 DCANP1Q8TF63 244 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 TMEM191AQ9H0A3 160 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 DPM3Q9P2X0 92 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 ARL2-SNX15V9GYD0 113 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 PRRC2AP48634 2157 aaKnown RBP4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 HECTD1Q9ULT8 2610 aa4.58□□□□□ -1.68
TRAPPC13-202ENST00000399438 IGHV1OR15-1A0A075B7D0 117 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 TMEM183BQ1AE95 376 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 EBLN2Q6P2I7 272 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 SSX8Q7RTT4 187 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 OSTCQ9NRP0 149 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 LGALS9O00182 355 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 GAS8-AS1O95177 125 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 IGHV3-11P01762 117 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 HINT1P49773 126 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 SPATA45Q537H7 98 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 DPH3Q96FX2 82 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 KCNS1Q96KK3 526 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 SMIM27A0A1W2PRY6 76 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 PRAC2D3DTV9 90 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 ZNF324O75467 553 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 INAFM2P0DMQ5 153 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 PLA2G2AP14555 144 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 FOXI1Q12951 378 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 IMUPQ9GZP8 106 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 KAAG1Q9UBP8 84 aa4.57□□□□□ -1.68
TRAPPC13-202ENST00000399438 ZNF469Q96JG9 3925 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 FASNP49327 2511 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 Q86TA4 180 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 LINC00311Q8N616 119 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 STPG4Q8N801 248 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 VGLL1Q99990 258 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 RPP21Q9H633 154 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 FN1P02751 2386 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 TRAV41A0A0B4J266 112 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 CRIP1P50238 77 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 KIAA0087Q14695 138 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 UNQ5815/PRO19632Q6UWF5 114 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 Q8N976 141 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 C18orf15Q96N68 181 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 C16orf95Q9H693 158 aa4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 FLNAP21333 2647 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-202ENST00000399438 NACAE9PAV3 2078 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 TRBV7-6A0A0J9YX20 115 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 C15orf32Q32M92 178 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 TRGV9Q99603 122 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 TXNDC17Q9BRA2 123 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 TMEM243Q9BU79 118 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 IGLV2-11P01706 119 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 REG3GQ6UW15 175 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 LINC00476Q8WZB0 136 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 AGRNO00468 2067 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 ITPR2Q14571 2701 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 EPM2AB3EWF7 344 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 HLA-DQA1P01909 254 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 ZNF80P51504 273 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 AMN1Q8IY45 258 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 C21orf62Q9NYP8 219 aa4.55□□□□□ -1.68
TRAPPC13-202ENST00000399438 HELZ2Q9BYK8 2649 aaKnown RBP4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 FAM181BA6NEQ2 426 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 HBBP68871 147 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 OR8A1Q8NGG7 326 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 OR4A5Q8NH83 315 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 IGHV7-81A0A0B4J1V7 117 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 TRAV40A0A0B4J280 105 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 DNAJC9-AS1A6NH13 148 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 J3QKU1 62 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 NMUP48645 174 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 BPIFA4PQ86YQ2 179 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 TEX29Q8N6K0 151 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 NKAPP1Q8N9T2 125 aa4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 UBR5O95071 2799 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-202ENST00000399438 LTAP01374 205 aa4.53□□□□□ -1.68
TRAPPC13-202ENST00000399438 Q6AWC8 147 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms