RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 C11orf86A6NJI1 115 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 LOXL1Q08397 574 aaPredicted RBP10.09□□□□□ -0.79
ITSN1-208ENST00000399349 CEMP1Q6PRD7 247 aaPredicted RBP10.09□□□□□ -0.79
ITSN1-208ENST00000399349 COX7B2Q8TF08 81 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 HERV-K104P63124 156 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 Q6ZPA2 131 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 SPATA12Q7Z6I5 190 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 ZNF503Q96F45 646 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 C16orf74Q96GX8 76 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 COX7A2LO14548 114 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 SPART-AS1P0CW21 52 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 MRPL23Q16540 153 aaKnown RBP10.09□□□□□ -0.79
ITSN1-208ENST00000399349 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 IGKV3D-7A0A0C4DH55 119 aa10.09□□□□□ -0.79
ITSN1-208ENST00000399349 ZNF295-AS1Q8N0V1 137 aa10.08□□□□□ -0.8
ITSN1-208ENST00000399349 LINC00322Q6ZN03 302 aaPredicted RBP10.08□□□□□ -0.8
ITSN1-208ENST00000399349 TRBV7-3A0A075B6L6 115 aa10.08□□□□□ -0.8
ITSN1-208ENST00000399349 ETDCA0A1B0GVM5 59 aa10.08□□□□□ -0.8
ITSN1-208ENST00000399349 ICOSQ9Y6W8 199 aa10.08□□□□□ -0.8
ITSN1-208ENST00000399349 C22orf34Q6ZV56 151 aa10.08□□□□□ -0.8
ITSN1-208ENST00000399349 IGKV1D-37A0A075B6S9 117 aa10.07□□□□□ -0.8
ITSN1-208ENST00000399349 C9orf66Q5T8R8 295 aa10.07□□□□□ -0.8
ITSN1-208ENST00000399349 Q8NA96 180 aa10.07□□□□□ -0.8
ITSN1-208ENST00000399349 ADAMTS9Q9P2N4 1935 aa10.07□□□□□ -0.8
ITSN1-208ENST00000399349 ZNF80P51504 273 aaPredicted RBP10.07□□□□□ -0.8
ITSN1-208ENST00000399349 BRWD1-AS2P59051 145 aa10.07□□□□□ -0.8
ITSN1-208ENST00000399349 RBM3P98179 157 aaKnown RBP10.07□□□□□ -0.8
ITSN1-208ENST00000399349 DAZ2Q13117 558 aaKnown RBP10.07□□□□□ -0.8
ITSN1-208ENST00000399349 DAZ4Q86SG3 579 aaKnown RBP10.07□□□□□ -0.8
ITSN1-208ENST00000399349 DAZ3Q9NR90 486 aaKnown RBP10.07□□□□□ -0.8
ITSN1-208ENST00000399349 HHLA3Q9XRX5 114 aa10.07□□□□□ -0.8
ITSN1-208ENST00000399349 IGHG2P01859 326 aa10.06□□□□□ -0.8
ITSN1-208ENST00000399349 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
ITSN1-208ENST00000399349 LINC01620Q4KN68 170 aa10.06□□□□□ -0.8
ITSN1-208ENST00000399349 WFDC11Q8NEX6 87 aa10.06□□□□□ -0.8
ITSN1-208ENST00000399349 TIMM17AQ99595 171 aa10.06□□□□□ -0.8
ITSN1-208ENST00000399349 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
ITSN1-208ENST00000399349 ODF1Q14990 250 aa10.06□□□□□ -0.8
ITSN1-208ENST00000399349 SIRPDQ9H106 197 aa10.06□□□□□ -0.8
ITSN1-208ENST00000399349 ABCA12Q86UK0 2595 aa10.06□□□□□ -0.8
ITSN1-208ENST00000399349 CLEC2BQ92478 149 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 VSIG2Q96IQ7 327 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 KLK12Q9UKR0 248 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 NCR3O14931 201 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 IGF2-ASQ6U949 168 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 GPHB5Q86YW7 130 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 LECT2O14960 151 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 P0DMU3 169 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 FAM231AP0DMU4 169 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 FAM231CP0DMU5 169 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 C1orf229Q6ZS94 237 aaPredicted RBP10.05□□□□□ -0.8
ITSN1-208ENST00000399349 PTH2Q96A98 100 aa10.05□□□□□ -0.8
ITSN1-208ENST00000399349 C19orf71A6NCJ1 209 aa10.04□□□□□ -0.8
ITSN1-208ENST00000399349 RNF152Q8N8N0 203 aa10.04□□□□□ -0.8
ITSN1-208ENST00000399349 TOMM6Q96B49 74 aa10.04□□□□□ -0.8
ITSN1-208ENST00000399349 K7EMT4 169 aa10.04□□□□□ -0.8
ITSN1-208ENST00000399349 E9PLD3 99 aa10.03□□□□□ -0.8
ITSN1-208ENST00000399349 CCL18P55774 89 aa10.03□□□□□ -0.8
ITSN1-208ENST00000399349 CRIP3Q6Q6R5 217 aa10.03□□□□□ -0.8
ITSN1-208ENST00000399349 A0A0J9YX75 114 aa10.03□□□□□ -0.8
ITSN1-208ENST00000399349 TEN1Q86WV5 123 aa10.03□□□□□ -0.8
ITSN1-208ENST00000399349 MIR7-3HGQ8N6C7 128 aa10.03□□□□□ -0.8
ITSN1-208ENST00000399349 CCDC140Q96MF4 163 aa10.03□□□□□ -0.8
ITSN1-208ENST00000399349 CEP295Q9C0D2 2601 aa10.03□□□□□ -0.8
ITSN1-208ENST00000399349 P0C879 139 aa10.02□□□□□ -0.81
ITSN1-208ENST00000399349 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.81
ITSN1-208ENST00000399349 H0YGX0 51 aa10.02□□□□□ -0.81
ITSN1-208ENST00000399349 DSCAMO60469 2012 aa10.01□□□□□ -0.81
ITSN1-208ENST00000399349 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
ITSN1-208ENST00000399349 OBSL1O75147 1896 aa10.01□□□□□ -0.81
ITSN1-208ENST00000399349 IGLV2-8P01709 118 aa10.01□□□□□ -0.81
ITSN1-208ENST00000399349 GDF5OSQ5U4N7 250 aa10.01□□□□□ -0.81
ITSN1-208ENST00000399349 KIAA1549Q9HCM3 1950 aa10.01□□□□□ -0.81
ITSN1-208ENST00000399349 IGF1P05019 195 aa10.01□□□□□ -0.81
ITSN1-208ENST00000399349 TIRAPP58753 221 aa10.01□□□□□ -0.81
ITSN1-208ENST00000399349 DAZAP2Q15038 168 aaPredicted RBP10.01□□□□□ -0.81
ITSN1-208ENST00000399349 F8W735 103 aaPredicted RBP10.01□□□□□ -0.81
ITSN1-208ENST00000399349 SPAG11BQ08648 103 aa10.01□□□□□ -0.81
ITSN1-208ENST00000399349 FAM236AA0A1B0GUQ0 79 aa10□□□□□ -0.81
ITSN1-208ENST00000399349 FAM236BA0A1B0GV22 79 aa10□□□□□ -0.81
ITSN1-208ENST00000399349 LMO4P61968 165 aa10□□□□□ -0.81
ITSN1-208ENST00000399349 C19orf84I3L1E1 186 aa10□□□□□ -0.81
ITSN1-208ENST00000399349 LGALS9O00182 355 aa10□□□□□ -0.81
ITSN1-208ENST00000399349 Q6ZUT4 128 aa10□□□□□ -0.81
ITSN1-208ENST00000399349 CLUHP3Q96NS8 147 aa10□□□□□ -0.81
ITSN1-208ENST00000399349 FN1P02751 2386 aaKnown RBP10□□□□□ -0.81
ITSN1-208ENST00000399349 HIGD1BQ9P298 99 aa10□□□□□ -0.81
ITSN1-208ENST00000399349 USP9YO00507 2555 aaPredicted RBP9.99□□□□□ -0.81
ITSN1-208ENST00000399349 LINC00310P59036 64 aa9.99□□□□□ -0.81
ITSN1-208ENST00000399349 HIST2H2BDQ6DRA6 164 aa9.99□□□□□ -0.81
ITSN1-208ENST00000399349 A0A1B0GX51 115 aa9.99□□□□□ -0.81
ITSN1-208ENST00000399349 C2orf16Q68DN1 1984 aa9.99□□□□□ -0.81
ITSN1-208ENST00000399349 ARHGAP32A7KAX9 2087 aa9.99□□□□□ -0.81
ITSN1-208ENST00000399349 A6NDX4 124 aa9.99□□□□□ -0.81
ITSN1-208ENST00000399349 NDUFA1O15239 70 aa9.99□□□□□ -0.81
ITSN1-208ENST00000399349 Q6ZTI0 123 aa9.98□□□□□ -0.81
ITSN1-208ENST00000399349 FOXI1Q12951 378 aa9.98□□□□□ -0.81
ITSN1-208ENST00000399349 C5orf47Q569G3 176 aa9.98□□□□□ -0.81
ITSN1-208ENST00000399349 IGHV1-58A0A0C4DH39 117 aa9.98□□□□□ -0.81
ITSN1-208ENST00000399349 A0A1B0GXF2 115 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms