RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SLC25A29Q8N8R3 303 aa14.97□□□□□ -0.01
CPNE1-204ENST00000397443 DEFB104AQ8WTQ1 72 aa14.97□□□□□ -0.01
CPNE1-204ENST00000397443 C18orf15Q96N68 181 aa14.97□□□□□ -0.01
CPNE1-204ENST00000397443 C11orf45Q8TAV5 145 aa14.96□□□□□ -0.01
CPNE1-204ENST00000397443 H7C1H1 209 aa14.96□□□□□ -0.02
CPNE1-204ENST00000397443 ATP5G1P05496 136 aa14.96□□□□□ -0.02
CPNE1-204ENST00000397443 S100A6P06703 90 aa14.96□□□□□ -0.02
CPNE1-204ENST00000397443 F5H768 121 aa14.95□□□□□ -0.02
CPNE1-204ENST00000397443 K7EQD1 137 aa14.95□□□□□ -0.02
CPNE1-204ENST00000397443 Q6ZTC4 211 aa14.95□□□□□ -0.02
CPNE1-204ENST00000397443 NEGR1Q7Z3B1 354 aa14.95□□□□□ -0.02
CPNE1-204ENST00000397443 MAP1LC3AQ9H492 121 aa14.95□□□□□ -0.02
CPNE1-204ENST00000397443 IFI27P40305 119 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-204ENST00000397443 NIT2Q9NQR4 276 aa14.94□□□□□ -0.02
CPNE1-204ENST00000397443 HHLA3Q9XRX5 114 aa14.94□□□□□ -0.02
CPNE1-204ENST00000397443 LAMTOR2Q9Y2Q5 125 aa14.94□□□□□ -0.02
CPNE1-204ENST00000397443 LOC100131303A0A0U1RQF7 123 aa14.94□□□□□ -0.02
CPNE1-204ENST00000397443 PRSS3P2Q8NHM4 247 aa14.94□□□□□ -0.02
CPNE1-204ENST00000397443 SUMO2P61956 95 aaKnown RBP14.93□□□□□ -0.02
CPNE1-204ENST00000397443 Q0VG73 95 aa14.93□□□□□ -0.02
CPNE1-204ENST00000397443 NEXN-AS1Q8NBZ9 246 aa14.93□□□□□ -0.02
CPNE1-204ENST00000397443 ST20Q9HBF5 79 aa14.93□□□□□ -0.02
CPNE1-204ENST00000397443 CIDEAO60543 219 aa14.92□□□□□ -0.02
CPNE1-204ENST00000397443 SERF1AO75920 110 aa14.92□□□□□ -0.02
CPNE1-204ENST00000397443 RNASEKQ6P5S7 137 aaKnown RBP14.92□□□□□ -0.02
CPNE1-204ENST00000397443 TNFRSF18Q9Y5U5 241 aa14.92□□□□□ -0.02
CPNE1-204ENST00000397443 A0A0J9YY99 117 aa14.92□□□□□ -0.02
CPNE1-204ENST00000397443 PPP1R17O96001 155 aa14.92□□□□□ -0.02
CPNE1-204ENST00000397443 PDZD11Q5EBL8 140 aa14.92□□□□□ -0.02
CPNE1-204ENST00000397443 NIT1Q86X76 327 aa14.92□□□□□ -0.02
CPNE1-204ENST00000397443 SDHAF1A6NFY7 115 aa14.91□□□□□ -0.02
CPNE1-204ENST00000397443 SNRPEP62304 92 aaKnown RBP14.91□□□□□ -0.02
CPNE1-204ENST00000397443 TRBV6-4A0A1B0GX49 114 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 GAGE12JA6NER3 117 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 NUPR1O60356 82 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 NHLRC4P0CG21 123 aaPredicted RBP14.9□□□□□ -0.02
CPNE1-204ENST00000397443 GAGE1Q13065 139 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 GAGE4Q13068 117 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 GAGE5Q13069 117 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 GAGE13Q4V321 117 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 ZNRF2Q8NHG8 242 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 URB1-AS1Q96HZ7 61 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 FBN3Q75N90 2809 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 LINC00310P59036 64 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 RHOHQ15669 191 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 C20orf78Q9BR46 151 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 TMEM70Q9BUB7 260 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 EDA2RQ9HAV5 297 aa14.9□□□□□ -0.02
CPNE1-204ENST00000397443 CRYBA4P53673 196 aa14.89□□□□□ -0.03
CPNE1-204ENST00000397443 FA2HQ7L5A8 372 aa14.89□□□□□ -0.03
CPNE1-204ENST00000397443 PRADC1Q9BSG0 188 aa14.89□□□□□ -0.03
CPNE1-204ENST00000397443 SMIM2Q9BVW6 85 aa14.89□□□□□ -0.03
CPNE1-204ENST00000397443 PRO0255Q9UI72 69 aa14.89□□□□□ -0.03
CPNE1-204ENST00000397443 TRAV26-1A0A087WT03 109 aa14.88□□□□□ -0.03
CPNE1-204ENST00000397443 IGHV3-38A0A0C4DH36 116 aa14.88□□□□□ -0.03
CPNE1-204ENST00000397443 PHLDA1Q8WV24 401 aaPredicted RBP14.88□□□□□ -0.03
CPNE1-204ENST00000397443 TCAPO15273 167 aa14.88□□□□□ -0.03
CPNE1-204ENST00000397443 PAX4O43316 350 aa14.88□□□□□ -0.03
CPNE1-204ENST00000397443 LINC00614P0C842 121 aa14.88□□□□□ -0.03
CPNE1-204ENST00000397443 TRBV6-5A0A0K0K1A5 114 aa14.87□□□□□ -0.03
CPNE1-204ENST00000397443 GYPEP15421 78 aa14.87□□□□□ -0.03
CPNE1-204ENST00000397443 PMCHP20382 165 aa14.87□□□□□ -0.03
CPNE1-204ENST00000397443 RPL36AP83881 106 aaKnown RBP14.87□□□□□ -0.03
CPNE1-204ENST00000397443 PMCHL1Q16048 86 aa14.87□□□□□ -0.03
CPNE1-204ENST00000397443 RPL36ALQ969Q0 106 aaKnown RBP14.87□□□□□ -0.03
CPNE1-204ENST00000397443 TRBV7-3A0A075B6L6 115 aa14.86□□□□□ -0.03
CPNE1-204ENST00000397443 POLR2KP53803 58 aaKnown RBP14.86□□□□□ -0.03
CPNE1-204ENST00000397443 IGLV2-18A0A075B6J9 118 aa14.86□□□□□ -0.03
CPNE1-204ENST00000397443 TRBV10-1A0A0K0K1A3 114 aa14.86□□□□□ -0.03
CPNE1-204ENST00000397443 Q8N8P6 123 aa14.86□□□□□ -0.03
CPNE1-204ENST00000397443 NXT2Q9NPJ8 142 aaKnown RBP14.86□□□□□ -0.03
CPNE1-204ENST00000397443 FAM19A2Q8N3H0 131 aa14.85□□□□□ -0.03
CPNE1-204ENST00000397443 VSIG2Q96IQ7 327 aa14.85□□□□□ -0.03
CPNE1-204ENST00000397443 DNAJC30Q96LL9 226 aa14.85□□□□□ -0.03
CPNE1-204ENST00000397443 AP5S1Q9NUS5 200 aa14.85□□□□□ -0.03
CPNE1-204ENST00000397443 COA6Q5JTJ3 125 aaKnown RBP14.84□□□□□ -0.03
CPNE1-204ENST00000397443 DEFB131BA0A096LNP1 70 aa14.84□□□□□ -0.03
CPNE1-204ENST00000397443 A0A096LPF7 62 aa14.84□□□□□ -0.03
CPNE1-204ENST00000397443 PRSS47A8MTI9 375 aa14.84□□□□□ -0.03
CPNE1-204ENST00000397443 VCYO14598 125 aa14.84□□□□□ -0.03
CPNE1-204ENST00000397443 HSBP1O75506 76 aa14.84□□□□□ -0.03
CPNE1-204ENST00000397443 C5orf52A6NGY3 159 aa14.83□□□□□ -0.04
CPNE1-204ENST00000397443 KIR2DL4Q99706 377 aa14.82□□□□□ -0.04
CPNE1-204ENST00000397443 TRBV27A0A0K0K1C4 114 aa14.82□□□□□ -0.04
CPNE1-204ENST00000397443 I3L3M4 83 aa14.82□□□□□ -0.04
CPNE1-204ENST00000397443 CHCHD1Q96BP2 118 aaKnown RBP14.82□□□□□ -0.04
CPNE1-204ENST00000397443 FCER1GP30273 86 aa14.81□□□□□ -0.04
CPNE1-204ENST00000397443 UBE2D3P61077 147 aa14.81□□□□□ -0.04
CPNE1-204ENST00000397443 UBE2D2P62837 147 aa14.81□□□□□ -0.04
CPNE1-204ENST00000397443 RPL32P62910 135 aaKnown RBP14.8□□□□□ -0.04
CPNE1-204ENST00000397443 LAGE3Q14657 143 aa14.8□□□□□ -0.04
CPNE1-204ENST00000397443 HIST3H2BBQ8N257 126 aa14.8□□□□□ -0.04
CPNE1-204ENST00000397443 TSHBP01222 138 aa14.79□□□□□ -0.04
CPNE1-204ENST00000397443 S100A2P29034 98 aa14.79□□□□□ -0.04
CPNE1-204ENST00000397443 AMTP48728 403 aa14.79□□□□□ -0.04
CPNE1-204ENST00000397443 TGP01266 2768 aa14.78□□□□□ -0.04
CPNE1-204ENST00000397443 TRAV10A0A0B4J240 114 aa14.78□□□□□ -0.04
CPNE1-204ENST00000397443 IGHV1-24A0A0C4DH33 117 aa14.78□□□□□ -0.04
CPNE1-204ENST00000397443 NUDT3O95989 172 aa14.77□□□□□ -0.04
CPNE1-204ENST00000397443 BTF3P20290 206 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms