RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 LGALS3P17931 250 aaKnown RBP11.58□□□□□ -0.56
HOXA3-202ENST00000396352 C10orf126Q8N4M7 172 aa11.57□□□□□ -0.56
HOXA3-202ENST00000396352 SPG11Q96JI7 2443 aa11.57□□□□□ -0.56
HOXA3-202ENST00000396352 TMEM89A2RUT3 159 aa11.57□□□□□ -0.56
HOXA3-202ENST00000396352 LEPROTO15243 131 aa11.57□□□□□ -0.56
HOXA3-202ENST00000396352 SYNJ2BPP57105 145 aa11.57□□□□□ -0.56
HOXA3-202ENST00000396352 FLNCQ14315 2725 aa11.57□□□□□ -0.56
HOXA3-202ENST00000396352 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
HOXA3-202ENST00000396352 ZNF22P17026 224 aaPredicted RBP11.57□□□□□ -0.56
HOXA3-202ENST00000396352 RNF152Q8N8N0 203 aa11.57□□□□□ -0.56
HOXA3-202ENST00000396352 UTP20O75691 2785 aaKnown RBP11.56□□□□□ -0.56
HOXA3-202ENST00000396352 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
HOXA3-202ENST00000396352 CSPG4Q6UVK1 2322 aa11.56□□□□□ -0.56
HOXA3-202ENST00000396352 I3L3M4 83 aa11.56□□□□□ -0.56
HOXA3-202ENST00000396352 ZNF418Q8TF45 676 aaPredicted RBP11.56□□□□□ -0.56
HOXA3-202ENST00000396352 IGLV4-3A0A075B6K6 122 aa11.56□□□□□ -0.56
HOXA3-202ENST00000396352 RBMY1A1P0DJD3 496 aaKnown RBP11.56□□□□□ -0.56
HOXA3-202ENST00000396352 RBMY1CP0DJD4 496 aa11.56□□□□□ -0.56
HOXA3-202ENST00000396352 RBMY1FQ15415 496 aaKnown RBP11.56□□□□□ -0.56
HOXA3-202ENST00000396352 LYRM7Q5U5X0 104 aa11.56□□□□□ -0.56
HOXA3-202ENST00000396352 RHODO00212 210 aa11.55□□□□□ -0.56
HOXA3-202ENST00000396352 PTH2Q96A98 100 aa11.55□□□□□ -0.56
HOXA3-202ENST00000396352 PRO1854Q9UHT4 67 aa11.55□□□□□ -0.56
HOXA3-202ENST00000396352 GATA3P23771 443 aa11.55□□□□□ -0.56
HOXA3-202ENST00000396352 SBSPONQ8IVN8 264 aa11.54□□□□□ -0.56
HOXA3-202ENST00000396352 FAM104AQ969W3 186 aa11.54□□□□□ -0.56
HOXA3-202ENST00000396352 DUX5Q96PT3 197 aa11.54□□□□□ -0.56
HOXA3-202ENST00000396352 TRBV20-1A0A075B6N2 111 aa11.54□□□□□ -0.56
HOXA3-202ENST00000396352 A0A0J9YXV3 536 aa11.54□□□□□ -0.56
HOXA3-202ENST00000396352 FHL3Q13643 280 aa11.54□□□□□ -0.56
HOXA3-202ENST00000396352 CDIP1Q9H305 208 aa11.54□□□□□ -0.56
HOXA3-202ENST00000396352 IGHV3-64A0A075B6Q5 118 aa11.54□□□□□ -0.56
HOXA3-202ENST00000396352 A4D1N5 150 aa11.53□□□□□ -0.56
HOXA3-202ENST00000396352 CARD19Q96LW7 228 aa11.53□□□□□ -0.56
HOXA3-202ENST00000396352 PKD1L2Q7Z442 2459 aa11.53□□□□□ -0.56
HOXA3-202ENST00000396352 TRGV11A0A075B6L2 103 aa11.53□□□□□ -0.56
HOXA3-202ENST00000396352 NRGNQ92686 78 aa11.53□□□□□ -0.56
HOXA3-202ENST00000396352 HOXD3P31249 432 aaPredicted RBP11.52□□□□□ -0.56
HOXA3-202ENST00000396352 EDA2RQ9HAV5 297 aa11.52□□□□□ -0.56
HOXA3-202ENST00000396352 SORL1Q92673 2214 aa11.52□□□□□ -0.56
HOXA3-202ENST00000396352 ZANQ9Y493 2812 aa11.52□□□□□ -0.57
HOXA3-202ENST00000396352 TEN1Q86WV5 123 aa11.52□□□□□ -0.57
HOXA3-202ENST00000396352 TMEM263Q8WUH6 116 aaKnown RBP11.52□□□□□ -0.57
HOXA3-202ENST00000396352 VCX2Q9H322 139 aa11.52□□□□□ -0.57
HOXA3-202ENST00000396352 DOPEY1Q5JWR5 2465 aa11.51□□□□□ -0.57
HOXA3-202ENST00000396352 TGFAP01135 160 aa11.51□□□□□ -0.57
HOXA3-202ENST00000396352 NACAE9PAV3 2078 aa11.51□□□□□ -0.57
HOXA3-202ENST00000396352 USP9XQ93008 2570 aaPredicted RBP11.51□□□□□ -0.57
HOXA3-202ENST00000396352 IGHV3-33P01772 117 aa11.5□□□□□ -0.57
HOXA3-202ENST00000396352 PROK1P58294 105 aa11.5□□□□□ -0.57
HOXA3-202ENST00000396352 MUSTN1Q8IVN3 82 aa11.5□□□□□ -0.57
HOXA3-202ENST00000396352 PPDPFLQ8WWR9 84 aa11.5□□□□□ -0.57
HOXA3-202ENST00000396352 PYGO1Q9Y3Y4 419 aa11.5□□□□□ -0.57
HOXA3-202ENST00000396352 A0A096LNT2 108 aa11.5□□□□□ -0.57
HOXA3-202ENST00000396352 IGHV3-73A0A0B4J1V6 119 aa11.5□□□□□ -0.57
HOXA3-202ENST00000396352 TRAV2A0A0B4J234 112 aa11.5□□□□□ -0.57
HOXA3-202ENST00000396352 LINC01356Q8N9X3 169 aa11.5□□□□□ -0.57
HOXA3-202ENST00000396352 RAX2Q96IS3 184 aa11.5□□□□□ -0.57
HOXA3-202ENST00000396352 MXRA5Q9NR99 2828 aa11.49□□□□□ -0.57
HOXA3-202ENST00000396352 A0A0B4J2C4 111 aa11.49□□□□□ -0.57
HOXA3-202ENST00000396352 KNCNA6PVL3 124 aa11.49□□□□□ -0.57
HOXA3-202ENST00000396352 M0R2P5 195 aa11.49□□□□□ -0.57
HOXA3-202ENST00000396352 A0A0J9YXY3 114 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 UBE2E2Q96LR5 201 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 ZNF702PQ9H963 129 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 A8MWV9 139 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 ELANEP08246 267 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 SCGB1C2P0DMR2 95 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 IGHV3-30-3P0DP02 117 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 DSCR9P59020 149 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 MRPS36P82909 103 aaKnown RBP11.48□□□□□ -0.57
HOXA3-202ENST00000396352 TCTEX1D4Q5JR98 221 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 VPREB3Q9UKI3 123 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 CD28P10747 220 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 CEMP1Q6PRD7 247 aaPredicted RBP11.48□□□□□ -0.57
HOXA3-202ENST00000396352 LITAFQ99732 161 aa11.48□□□□□ -0.57
HOXA3-202ENST00000396352 A8MTW9 85 aa11.47□□□□□ -0.57
HOXA3-202ENST00000396352 PRM2P04554 102 aa11.47□□□□□ -0.57
HOXA3-202ENST00000396352 HTN1P15515 57 aa11.47□□□□□ -0.57
HOXA3-202ENST00000396352 ANKRD29Q8N6D5 301 aa11.47□□□□□ -0.57
HOXA3-202ENST00000396352 Q9UF83 564 aa11.47□□□□□ -0.57
HOXA3-202ENST00000396352 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
HOXA3-202ENST00000396352 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
HOXA3-202ENST00000396352 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
HOXA3-202ENST00000396352 SPXQ9BT56 116 aa11.47□□□□□ -0.57
HOXA3-202ENST00000396352 FBN2P35556 2912 aa11.46□□□□□ -0.57
HOXA3-202ENST00000396352 CIDEAO60543 219 aa11.46□□□□□ -0.58
HOXA3-202ENST00000396352 Q6ZSN1 163 aa11.46□□□□□ -0.58
HOXA3-202ENST00000396352 MAPK1IP1LQ8NDC0 245 aa11.46□□□□□ -0.58
HOXA3-202ENST00000396352 TIMM21Q9BVV7 248 aa11.46□□□□□ -0.58
HOXA3-202ENST00000396352 ERG28Q9UKR5 140 aa11.46□□□□□ -0.58
HOXA3-202ENST00000396352 ADARB2-AS1A8MUL3 147 aa11.45□□□□□ -0.58
HOXA3-202ENST00000396352 CRYBA4P53673 196 aa11.45□□□□□ -0.58
HOXA3-202ENST00000396352 DEFB131AP59861 70 aa11.45□□□□□ -0.58
HOXA3-202ENST00000396352 C18orf65Q6ZTR6 163 aa11.45□□□□□ -0.58
HOXA3-202ENST00000396352 TRAV8-3A0A0A6YYJ7 113 aa11.45□□□□□ -0.58
HOXA3-202ENST00000396352 H3BMM0 161 aa11.45□□□□□ -0.58
HOXA3-202ENST00000396352 J3QLI3 93 aa11.45□□□□□ -0.58
HOXA3-202ENST00000396352 RNASE13Q5GAN3 156 aaKnown RBP11.45□□□□□ -0.58
HOXA3-202ENST00000396352 IGSF10Q6WRI0 2623 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms