RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 CELA1Q9UNI1 258 aa10.96□□□□□ -0.65
VAMP1-202ENST00000396308 TGP01266 2768 aa10.96□□□□□ -0.66
VAMP1-202ENST00000396308 LOC389332A0A1B0GUA5 103 aa10.95□□□□□ -0.66
VAMP1-202ENST00000396308 IQCJQ1A5X6 159 aa10.95□□□□□ -0.66
VAMP1-202ENST00000396308 NRACQ8N912 160 aa10.95□□□□□ -0.66
VAMP1-202ENST00000396308 RPL39LQ96EH5 51 aaKnown RBP10.95□□□□□ -0.66
VAMP1-202ENST00000396308 TRBV6-4A0A1B0GX49 114 aa10.94□□□□□ -0.66
VAMP1-202ENST00000396308 GATA1P15976 413 aaPredicted RBP10.94□□□□□ -0.66
VAMP1-202ENST00000396308 RPL36AP83881 106 aaKnown RBP10.94□□□□□ -0.66
VAMP1-202ENST00000396308 RPL36ALQ969Q0 106 aaKnown RBP10.94□□□□□ -0.66
VAMP1-202ENST00000396308 CHCHD1Q96BP2 118 aaKnown RBP10.94□□□□□ -0.66
VAMP1-202ENST00000396308 SMIM2Q9BVW6 85 aa10.94□□□□□ -0.66
VAMP1-202ENST00000396308 TRBV6-5A0A0K0K1A5 114 aa10.93□□□□□ -0.66
VAMP1-202ENST00000396308 TCAPO15273 167 aa10.93□□□□□ -0.66
VAMP1-202ENST00000396308 HSBP1O75506 76 aa10.93□□□□□ -0.66
VAMP1-202ENST00000396308 HTN3P15516 51 aa10.93□□□□□ -0.66
VAMP1-202ENST00000396308 S100A2P29034 98 aa10.93□□□□□ -0.66
VAMP1-202ENST00000396308 COA6Q5JTJ3 125 aaKnown RBP10.93□□□□□ -0.66
VAMP1-202ENST00000396308 C11orf45Q8TAV5 145 aa10.93□□□□□ -0.66
VAMP1-202ENST00000396308 KIR2DL4Q99706 377 aa10.93□□□□□ -0.66
VAMP1-202ENST00000396308 AP5S1Q9NUS5 200 aa10.93□□□□□ -0.66
VAMP1-202ENST00000396308 SERF1AO75920 110 aa10.92□□□□□ -0.66
VAMP1-202ENST00000396308 GAS8-AS1O95177 125 aa10.92□□□□□ -0.66
VAMP1-202ENST00000396308 RPL32P62910 135 aaKnown RBP10.92□□□□□ -0.66
VAMP1-202ENST00000396308 Q8N8P6 123 aa10.92□□□□□ -0.66
VAMP1-202ENST00000396308 SLC25A29Q8N8R3 303 aa10.92□□□□□ -0.66
VAMP1-202ENST00000396308 PRO0255Q9UI72 69 aa10.92□□□□□ -0.66
VAMP1-202ENST00000396308 HHLA3Q9XRX5 114 aa10.92□□□□□ -0.66
VAMP1-202ENST00000396308 CMYA5Q8N3K9 4069 aa10.92□□□□□ -0.66
VAMP1-202ENST00000396308 SDHAF1A6NFY7 115 aa10.91□□□□□ -0.66
VAMP1-202ENST00000396308 PRSS47A8MTI9 375 aa10.91□□□□□ -0.66
VAMP1-202ENST00000396308 F5H768 121 aa10.91□□□□□ -0.66
VAMP1-202ENST00000396308 K7EMI3 77 aa10.91□□□□□ -0.66
VAMP1-202ENST00000396308 VCYO14598 125 aa10.91□□□□□ -0.66
VAMP1-202ENST00000396308 LINC00614P0C842 121 aa10.91□□□□□ -0.66
VAMP1-202ENST00000396308 IFI27P40305 119 aaPredicted RBP10.91□□□□□ -0.66
VAMP1-202ENST00000396308 FHL2Q14192 279 aa10.91□□□□□ -0.66
VAMP1-202ENST00000396308 NIT1Q86X76 327 aa10.91□□□□□ -0.66
VAMP1-202ENST00000396308 FCER1GP30273 86 aa10.9□□□□□ -0.66
VAMP1-202ENST00000396308 SNRPEP62304 92 aaKnown RBP10.9□□□□□ -0.66
VAMP1-202ENST00000396308 C12orf74Q32Q52 190 aa10.9□□□□□ -0.66
VAMP1-202ENST00000396308 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
VAMP1-202ENST00000396308 TMEM70Q9BUB7 260 aa10.9□□□□□ -0.66
VAMP1-202ENST00000396308 TRBV7-3A0A075B6L6 115 aa10.89□□□□□ -0.67
VAMP1-202ENST00000396308 PAX4O43316 350 aa10.89□□□□□ -0.67
VAMP1-202ENST00000396308 P0DMU3 169 aa10.89□□□□□ -0.67
VAMP1-202ENST00000396308 FAM231AP0DMU4 169 aa10.89□□□□□ -0.67
VAMP1-202ENST00000396308 FAM231CP0DMU5 169 aa10.89□□□□□ -0.67
VAMP1-202ENST00000396308 G0S2P27469 103 aa10.89□□□□□ -0.67
VAMP1-202ENST00000396308 ORMDL2Q53FV1 153 aa10.89□□□□□ -0.67
VAMP1-202ENST00000396308 Q6ZSN1 163 aa10.89□□□□□ -0.67
VAMP1-202ENST00000396308 ZNRF2Q8NHG8 242 aa10.89□□□□□ -0.67
VAMP1-202ENST00000396308 C5orf52A6NGY3 159 aa10.88□□□□□ -0.67
VAMP1-202ENST00000396308 I3L3M4 83 aa10.88□□□□□ -0.67
VAMP1-202ENST00000396308 CRYBA4P53673 196 aa10.88□□□□□ -0.67
VAMP1-202ENST00000396308 TMEM18Q96B42 140 aa10.88□□□□□ -0.67
VAMP1-202ENST00000396308 TRBV27A0A0K0K1C4 114 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 GAGE12JA6NER3 117 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 ESDP10768 282 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 HOXA5P20719 270 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 AMTP48728 403 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 GAGE1Q13065 139 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 GAGE4Q13068 117 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 GAGE5Q13069 117 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 LAGE3Q14657 143 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 GAGE13Q4V321 117 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 PDZD11Q5EBL8 140 aa10.87□□□□□ -0.67
VAMP1-202ENST00000396308 DAZ4Q86SG3 579 aaKnown RBP10.87□□□□□ -0.67
VAMP1-202ENST00000396308 DAZ3Q9NR90 486 aaKnown RBP10.87□□□□□ -0.67
VAMP1-202ENST00000396308 GYPEP15421 78 aa10.86□□□□□ -0.67
VAMP1-202ENST00000396308 POLR2KP53803 58 aaKnown RBP10.86□□□□□ -0.67
VAMP1-202ENST00000396308 NANOS2P60321 138 aaKnown RBP10.86□□□□□ -0.67
VAMP1-202ENST00000396308 COTL1Q14019 142 aa10.86□□□□□ -0.67
VAMP1-202ENST00000396308 Q6ZTC4 211 aa10.86□□□□□ -0.67
VAMP1-202ENST00000396308 NBEAL2Q6ZNJ1 2754 aa10.85□□□□□ -0.67
VAMP1-202ENST00000396308 TRAV26-1A0A087WT03 109 aa10.85□□□□□ -0.67
VAMP1-202ENST00000396308 TRAV10A0A0B4J240 114 aa10.85□□□□□ -0.67
VAMP1-202ENST00000396308 LINC01549A6NIU2 74 aa10.85□□□□□ -0.67
VAMP1-202ENST00000396308 NUDT3O95989 172 aa10.85□□□□□ -0.67
VAMP1-202ENST00000396308 TMEM97Q5BJF2 176 aa10.85□□□□□ -0.67
VAMP1-202ENST00000396308 SH2D6Q7Z4S9 175 aa10.85□□□□□ -0.67
VAMP1-202ENST00000396308 HIST3H2BBQ8N257 126 aa10.85□□□□□ -0.67
VAMP1-202ENST00000396308 DNAH3Q8TD57 4116 aa10.85□□□□□ -0.67
VAMP1-202ENST00000396308 IGLV2-18A0A075B6J9 118 aa10.84□□□□□ -0.67
VAMP1-202ENST00000396308 DEFB131BA0A096LNP1 70 aa10.84□□□□□ -0.67
VAMP1-202ENST00000396308 LINC01546A6NGU7 62 aa10.84□□□□□ -0.67
VAMP1-202ENST00000396308 HBDP02042 147 aa10.84□□□□□ -0.67
VAMP1-202ENST00000396308 UBE2D3P61077 147 aa10.84□□□□□ -0.67
VAMP1-202ENST00000396308 UBE2D2P62837 147 aa10.84□□□□□ -0.67
VAMP1-202ENST00000396308 NEGR1Q7Z3B1 354 aa10.84□□□□□ -0.67
VAMP1-202ENST00000396308 ICOSQ9Y6W8 199 aa10.84□□□□□ -0.67
VAMP1-202ENST00000396308 IGHV1-24A0A0C4DH33 117 aa10.83□□□□□ -0.68
VAMP1-202ENST00000396308 A0A0J9YY99 117 aa10.83□□□□□ -0.68
VAMP1-202ENST00000396308 BTF3P20290 206 aaKnown RBP10.83□□□□□ -0.68
VAMP1-202ENST00000396308 LINC00310P59036 64 aa10.83□□□□□ -0.68
VAMP1-202ENST00000396308 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
VAMP1-202ENST00000396308 PHLDA1Q8WV24 401 aaPredicted RBP10.83□□□□□ -0.68
VAMP1-202ENST00000396308 URB1-AS1Q96HZ7 61 aa10.83□□□□□ -0.68
VAMP1-202ENST00000396308 LOC100131303A0A0U1RQF7 123 aa10.82□□□□□ -0.68
VAMP1-202ENST00000396308 H3BNG1 76 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms